RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 SOX12O15370 315 aa28.73■■■□□ 2.19
VPS51-211ENST00000533487 GLI3P10071 1580 aa28.73■■■□□ 2.19
VPS51-211ENST00000533487 BLMP54132 1417 aaPredicted RBP28.73■■■□□ 2.19
VPS51-211ENST00000533487 ILDR2Q71H61 639 aa28.73■■■□□ 2.19
VPS51-211ENST00000533487 RTL1A6NKG5 1358 aa28.72■■■□□ 2.19
VPS51-211ENST00000533487 SPATA31A5Q5VU36 1347 aa28.71■■■□□ 2.19
VPS51-211ENST00000533487 SPATA31A7Q8IWB4 1347 aa28.71■■■□□ 2.19
VPS51-211ENST00000533487 RGPD5Q99666 1765 aa28.71■■■□□ 2.19
VPS51-211ENST00000533487 CCDC9Q9Y3X0 531 aaKnown RBP28.7■■■□□ 2.18
VPS51-211ENST00000533487 NPC1L1Q9UHC9 1359 aa28.7■■■□□ 2.18
VPS51-211ENST00000533487 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
VPS51-211ENST00000533487 PER1O15534 1290 aaPredicted RBP28.69■■■□□ 2.18
VPS51-211ENST00000533487 ONECUT3O60422 494 aaPredicted RBP28.68■■■□□ 2.18
VPS51-211ENST00000533487 IP6K1Q92551 441 aa28.68■■■□□ 2.18
VPS51-211ENST00000533487 STRN4Q9NRL3 753 aa28.68■■■□□ 2.18
VPS51-211ENST00000533487 THRAP3Q9Y2W1 955 aaKnown RBP28.68■■■□□ 2.18
VPS51-211ENST00000533487 CRB1P82279 1406 aa28.68■■■□□ 2.18
VPS51-211ENST00000533487 SPATA31A1Q5TZJ5 1347 aa28.68■■■□□ 2.18
VPS51-211ENST00000533487 WDR17Q8IZU2 1322 aa28.68■■■□□ 2.18
VPS51-211ENST00000533487 FAM208AQ9UK61 1670 aaKnown RBP28.67■■■□□ 2.18
VPS51-211ENST00000533487 MAP3K19Q56UN5 1328 aa28.67■■■□□ 2.18
VPS51-211ENST00000533487 AXIN2Q9Y2T1 843 aa28.66■■■□□ 2.18
VPS51-211ENST00000533487 MAP2P11137 1827 aaKnown RBP28.66■■■□□ 2.18
VPS51-211ENST00000533487 AMER1Q5JTC6 1135 aaPredicted RBP28.65■■■□□ 2.18
VPS51-211ENST00000533487 RGS12O14924 1447 aa28.65■■■□□ 2.18
VPS51-211ENST00000533487 AMPHP49418 695 aa28.64■■■□□ 2.18
VPS51-211ENST00000533487 BARGINQ6ZT62 677 aa28.63■■■□□ 2.17
VPS51-211ENST00000533487 ERBB3P21860 1342 aa28.63■■■□□ 2.17
VPS51-211ENST00000533487 LARP1Q6PKG0 1096 aaKnown RBP28.62■■■□□ 2.17
VPS51-211ENST00000533487 FLT4P35916 1363 aa28.62■■■□□ 2.17
VPS51-211ENST00000533487 TCP11L2Q8N4U5 519 aa28.61■■■□□ 2.17
VPS51-211ENST00000533487 HOXC9P31274 260 aa28.6■■■□□ 2.17
VPS51-211ENST00000533487 MORC1Q86VD1 984 aa28.6■■■□□ 2.17
VPS51-211ENST00000533487 THSD7AQ9UPZ6 1657 aa28.59■■■□□ 2.17
VPS51-211ENST00000533487 CSB-PGBD3P0DP91 1061 aa28.59■■■□□ 2.17
VPS51-211ENST00000533487 TOM1L2Q6ZVM7 507 aa28.59■■■□□ 2.17
VPS51-211ENST00000533487 CARD10Q9BWT7 1032 aa28.59■■■□□ 2.17
VPS51-211ENST00000533487 RRS1Q15050 365 aaKnown RBP28.58■■■□□ 2.17
VPS51-211ENST00000533487 CDCA7Q9BWT1 371 aaPredicted RBP28.57■■■□□ 2.16
VPS51-211ENST00000533487 INSRP06213 1382 aa28.57■■■□□ 2.16
VPS51-211ENST00000533487 SMG6Q86US8 1419 aaKnown RBP28.57■■■□□ 2.16
VPS51-211ENST00000533487 ANKRD24Q8TF21 1146 aa28.56■■■□□ 2.16
VPS51-211ENST00000533487 WNK3Q9BYP7 1800 aa28.55■■■□□ 2.16
VPS51-211ENST00000533487 FAM98CQ17RN3 349 aaKnown RBP28.55■■■□□ 2.16
VPS51-211ENST00000533487 SEPT12Q8IYM1 358 aa28.55■■■□□ 2.16
VPS51-211ENST00000533487 PEAK1Q9H792 1746 aa28.55■■■□□ 2.16
VPS51-211ENST00000533487 PARP4Q9UKK3 1724 aaKnown RBP28.54■■■□□ 2.16
VPS51-211ENST00000533487 SOCS7O14512 581 aa28.53■■■□□ 2.16
VPS51-211ENST00000533487 FBLN1P23142 703 aa28.53■■■□□ 2.16
VPS51-211ENST00000533487 POLKQ9UBT6 870 aa28.53■■■□□ 2.16
VPS51-211ENST00000533487 BRWD3Q6RI45 1802 aa28.53■■■□□ 2.16
VPS51-211ENST00000533487 USP35Q9P2H5 1018 aa28.51■■■□□ 2.15
VPS51-211ENST00000533487 EMILIN1Q9Y6C2 1016 aa28.5■■■□□ 2.15
VPS51-211ENST00000533487 NLRP2Q9NX02 1062 aa28.49■■■□□ 2.15
VPS51-211ENST00000533487 A0A0G2JS52 829 aa28.48■■■□□ 2.15
VPS51-211ENST00000533487 MYT1Q01538 1121 aa28.48■■■□□ 2.15
VPS51-211ENST00000533487 TNNT2P45379 298 aaPredicted RBP28.46■■■□□ 2.15
VPS51-211ENST00000533487 HSP90AB2PQ58FF8 381 aa28.46■■■□□ 2.15
VPS51-211ENST00000533487 CC2D1BQ5T0F9 858 aaKnown RBP28.46■■■□□ 2.15
VPS51-211ENST00000533487 PPM1GO15355 546 aaPredicted RBP28.45■■■□□ 2.14
VPS51-211ENST00000533487 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
VPS51-211ENST00000533487 DISP2A7MBM2 1401 aa28.44■■■□□ 2.14
VPS51-211ENST00000533487 LTV1Q96GA3 475 aaPredicted RBP28.43■■■□□ 2.14
VPS51-211ENST00000533487 RGPD2P0DJD1 1756 aa28.42■■■□□ 2.14
VPS51-211ENST00000533487 LRRC37A3O60309 1634 aa28.41■■■□□ 2.14
VPS51-211ENST00000533487 IL2RBP14784 551 aa28.4■■■□□ 2.14
VPS51-211ENST00000533487 PDE3BQ13370 1112 aa28.4■■■□□ 2.14
VPS51-211ENST00000533487 ZNF316A6NFI3 1004 aaPredicted RBP28.39■■■□□ 2.14
VPS51-211ENST00000533487 DDB1Q16531 1140 aa28.39■■■□□ 2.14
VPS51-211ENST00000533487 PLEKHG2Q9H7P9 1386 aa28.38■■■□□ 2.13
VPS51-211ENST00000533487 NCAPD2Q15021 1401 aa28.38■■■□□ 2.13
VPS51-211ENST00000533487 DDX10Q13206 875 aaKnown RBP28.38■■■□□ 2.13
VPS51-211ENST00000533487 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
VPS51-211ENST00000533487 NBPF6Q5VWK0 638 aa28.36■■■□□ 2.13
VPS51-211ENST00000533487 NBPF4Q96M43 638 aa28.36■■■□□ 2.13
VPS51-211ENST00000533487 EXOC5O00471 708 aa28.35■■■□□ 2.13
VPS51-211ENST00000533487 MTHFSP49914 203 aa28.35■■■□□ 2.13
VPS51-211ENST00000533487 TNS2Q63HR2 1409 aa28.35■■■□□ 2.13
VPS51-211ENST00000533487 EIF4A2Q14240 407 aaKnown RBP28.33■■■□□ 2.13
VPS51-211ENST00000533487 FAM196AQ6ZSG2 479 aa28.33■■■□□ 2.13
VPS51-211ENST00000533487 PARD3Q8TEW0 1356 aa28.32■■■□□ 2.12
VPS51-211ENST00000533487 BCL9O00512 1426 aa28.32■■■□□ 2.12
VPS51-211ENST00000533487 RAPGEF4Q8WZA2 1011 aa28.31■■■□□ 2.12
VPS51-211ENST00000533487 OVOS2A0A0G2JMS6 1433 aa28.3■■■□□ 2.12
VPS51-211ENST00000533487 RALBP1Q15311 655 aa28.3■■■□□ 2.12
VPS51-211ENST00000533487 UPF1Q92900 1129 aaKnown RBP eCLIP28.3■■■□□ 2.12
VPS51-211ENST00000533487 EYA1Q99502 592 aa28.29■■■□□ 2.12
VPS51-211ENST00000533487 IGSF1Q8N6C5 1336 aa28.28■■■□□ 2.12
VPS51-211ENST00000533487 RGPD1P0DJD0 1748 aa28.27■■■□□ 2.12
VPS51-211ENST00000533487 TATP17735 454 aaPredicted RBP28.27■■■□□ 2.12
VPS51-211ENST00000533487 CFAP53Q96M91 514 aa28.27■■■□□ 2.12
VPS51-211ENST00000533487 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
VPS51-211ENST00000533487 MEGF6O75095 1541 aa28.24■■■□□ 2.11
VPS51-211ENST00000533487 DIAPH1O60610 1272 aaKnown RBP28.24■■■□□ 2.11
VPS51-211ENST00000533487 IL13P35225 146 aa28.24■■■□□ 2.11
VPS51-211ENST00000533487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.24■■■□□ 2.11
VPS51-211ENST00000533487 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
VPS51-211ENST00000533487 CNGB1Q14028 1251 aaPredicted RBP28.23■■■□□ 2.11
VPS51-211ENST00000533487 ZCRB1Q8TBF4 217 aaKnown RBP28.23■■■□□ 2.11
VPS51-211ENST00000533487 COL3A1P02461 1466 aaPredicted RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms