RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 AATKQ6ZMQ8 1374 aa14.74□□□□□ -0.05
ATG13-220ENST00000533316 PTGER2P43116 358 aa14.74□□□□□ -0.05
ATG13-220ENST00000533316 USP6P35125 1406 aa14.74□□□□□ -0.05
ATG13-220ENST00000533316 COL18A1P39060 1754 aa14.73□□□□□ -0.05
ATG13-220ENST00000533316 MYOM1P52179 1685 aa14.73□□□□□ -0.05
ATG13-220ENST00000533316 RGPD5Q99666 1765 aa14.73□□□□□ -0.05
ATG13-220ENST00000533316 SLIT3O75094 1523 aa14.72□□□□□ -0.05
ATG13-220ENST00000533316 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
ATG13-220ENST00000533316 TXNRD1Q16881 649 aa14.72□□□□□ -0.05
ATG13-220ENST00000533316 UTRNP46939 3433 aa14.72□□□□□ -0.05
ATG13-220ENST00000533316 PIK3C2AO00443 1686 aa14.71□□□□□ -0.05
ATG13-220ENST00000533316 WDR17Q8IZU2 1322 aa14.71□□□□□ -0.05
ATG13-220ENST00000533316 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.05
ATG13-220ENST00000533316 KIAA1210Q9ULL0 1709 aa14.71□□□□□ -0.05
ATG13-220ENST00000533316 QRICH2Q9H0J4 1663 aa14.71□□□□□ -0.06
ATG13-220ENST00000533316 ZNF784Q8NCA9 323 aaPredicted RBP14.7□□□□□ -0.06
ATG13-220ENST00000533316 FHDC1Q9C0D6 1143 aaPredicted RBP14.7□□□□□ -0.06
ATG13-220ENST00000533316 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
ATG13-220ENST00000533316 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
ATG13-220ENST00000533316 CPSF1Q10570 1443 aaKnown RBP14.69□□□□□ -0.06
ATG13-220ENST00000533316 C11orf95C9JLR9 678 aaPredicted RBP14.69□□□□□ -0.06
ATG13-220ENST00000533316 ARHGEF25Q86VW2 580 aa14.69□□□□□ -0.06
ATG13-220ENST00000533316 RGPD3A6NKT7 1758 aaPredicted RBP14.69□□□□□ -0.06
ATG13-220ENST00000533316 RGPD4Q7Z3J3 1758 aa14.69□□□□□ -0.06
ATG13-220ENST00000533316 TTC21BQ7Z4L5 1316 aa14.68□□□□□ -0.06
ATG13-220ENST00000533316 SLC15A2Q16348 729 aa14.68□□□□□ -0.06
ATG13-220ENST00000533316 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
ATG13-220ENST00000533316 AKAP12Q02952 1782 aa14.68□□□□□ -0.06
ATG13-220ENST00000533316 EXOC5O00471 708 aa14.67□□□□□ -0.06
ATG13-220ENST00000533316 CARD10Q9BWT7 1032 aa14.67□□□□□ -0.06
ATG13-220ENST00000533316 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
ATG13-220ENST00000533316 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
ATG13-220ENST00000533316 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
ATG13-220ENST00000533316 CDCA7Q9BWT1 371 aaPredicted RBP14.64□□□□□ -0.07
ATG13-220ENST00000533316 EVC2Q86UK5 1308 aa14.64□□□□□ -0.07
ATG13-220ENST00000533316 KAT6BQ8WYB5 2073 aa14.63□□□□□ -0.07
ATG13-220ENST00000533316 ZNF827Q17R98 1081 aa14.63□□□□□ -0.07
ATG13-220ENST00000533316 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.63□□□□□ -0.07
ATG13-220ENST00000533316 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
ATG13-220ENST00000533316 MTFR1LQ9H019 292 aa14.63□□□□□ -0.07
ATG13-220ENST00000533316 BCL9O00512 1426 aa14.63□□□□□ -0.07
ATG13-220ENST00000533316 NFAT5O94916 1531 aa14.62□□□□□ -0.07
ATG13-220ENST00000533316 NLRP2Q9NX02 1062 aa14.62□□□□□ -0.07
ATG13-220ENST00000533316 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
ATG13-220ENST00000533316 KLHL34Q8N239 644 aa14.61□□□□□ -0.07
ATG13-220ENST00000533316 ARXQ96QS3 562 aa14.61□□□□□ -0.07
ATG13-220ENST00000533316 SIN3AQ96ST3 1273 aa14.61□□□□□ -0.07
ATG13-220ENST00000533316 LRRC4BQ9NT99 713 aa14.61□□□□□ -0.07
ATG13-220ENST00000533316 TNS2Q63HR2 1409 aa14.6□□□□□ -0.07
ATG13-220ENST00000533316 KCNQ4P56696 695 aa14.6□□□□□ -0.07
ATG13-220ENST00000533316 NME9Q86XW9 330 aa14.6□□□□□ -0.07
ATG13-220ENST00000533316 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
ATG13-220ENST00000533316 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
ATG13-220ENST00000533316 TRPM1Q7Z4N2 1603 aa14.59□□□□□ -0.07
ATG13-220ENST00000533316 CCDC7Q96M83 1385 aa14.59□□□□□ -0.07
ATG13-220ENST00000533316 NHSQ6T4R5 1651 aa14.58□□□□□ -0.07
ATG13-220ENST00000533316 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
ATG13-220ENST00000533316 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
ATG13-220ENST00000533316 C1QTNF8P60827 252 aa14.57□□□□□ -0.08
ATG13-220ENST00000533316 NEUROD1Q13562 356 aa14.57□□□□□ -0.08
ATG13-220ENST00000533316 GPR162Q16538 588 aa14.57□□□□□ -0.08
ATG13-220ENST00000533316 ERBB3P21860 1342 aa14.57□□□□□ -0.08
ATG13-220ENST00000533316 BTAF1O14981 1849 aa14.57□□□□□ -0.08
ATG13-220ENST00000533316 PAPPAQ13219 1627 aa14.56□□□□□ -0.08
ATG13-220ENST00000533316 IL2RBP14784 551 aa14.56□□□□□ -0.08
ATG13-220ENST00000533316 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
ATG13-220ENST00000533316 ANKRD24Q8TF21 1146 aa14.56□□□□□ -0.08
ATG13-220ENST00000533316 LTV1Q96GA3 475 aaPredicted RBP14.56□□□□□ -0.08
ATG13-220ENST00000533316 ROCK2O75116 1388 aaKnown RBP14.56□□□□□ -0.08
ATG13-220ENST00000533316 CHD4Q14839 1912 aa14.56□□□□□ -0.08
ATG13-220ENST00000533316 TMC1Q8TDI8 760 aa14.54□□□□□ -0.08
ATG13-220ENST00000533316 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
ATG13-220ENST00000533316 ABCC6O95255 1503 aa14.54□□□□□ -0.08
ATG13-220ENST00000533316 NLGN2Q8NFZ4 835 aa14.53□□□□□ -0.08
ATG13-220ENST00000533316 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
ATG13-220ENST00000533316 LTN1O94822 1766 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 MON2Q7Z3U7 1717 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 CD163L1Q9NR16 1453 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 USP31Q70CQ4 1352 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 SBNO2Q9Y2G9 1366 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 PNPLA7Q6ZV29 1317 aa14.52□□□□□ -0.08
ATG13-220ENST00000533316 FBLN1P23142 703 aa14.52□□□□□ -0.09
ATG13-220ENST00000533316 SYTL4Q96C24 671 aaPredicted RBP14.51□□□□□ -0.09
ATG13-220ENST00000533316 GOLGB1Q14789 3259 aaKnown RBP14.5□□□□□ -0.09
ATG13-220ENST00000533316 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
ATG13-220ENST00000533316 MAP3K5Q99683 1374 aa14.49□□□□□ -0.09
ATG13-220ENST00000533316 TFCP2L1Q9NZI6 479 aa14.49□□□□□ -0.09
ATG13-220ENST00000533316 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
ATG13-220ENST00000533316 POLD1P28340 1107 aa14.48□□□□□ -0.09
ATG13-220ENST00000533316 MSH5O43196 834 aa14.47□□□□□ -0.09
ATG13-220ENST00000533316 GIGYF1O75420 1035 aaPredicted RBP14.47□□□□□ -0.09
ATG13-220ENST00000533316 YBX3P16989 372 aaKnown RBP eCLIP14.47□□□□□ -0.09
ATG13-220ENST00000533316 MSL1Q68DK7 614 aa14.47□□□□□ -0.09
ATG13-220ENST00000533316 SLC27A3Q5K4L6 730 aa14.46□□□□□ -0.09
ATG13-220ENST00000533316 HDGFL2Q7Z4V5 671 aaPredicted RBP14.46□□□□□ -0.09
ATG13-220ENST00000533316 IP6K1Q92551 441 aa14.46□□□□□ -0.09
ATG13-220ENST00000533316 CARD11Q9BXL7 1154 aa14.45□□□□□ -0.1
ATG13-220ENST00000533316 USP54Q70EL1 1684 aa14.45□□□□□ -0.1
ATG13-220ENST00000533316 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
ATG13-220ENST00000533316 NSD2O96028 1365 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms