RNA–Protein interactions for RNA: ENST00000533168.1

CTSF-209, Transcript of cathepsin F, humanhuman

TSL 2

Gene CTSF, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-209ENST00000533168 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
CTSF-209ENST00000533168 WNK3Q9BYP7 1800 aa18.95■□□□□ 0.62
CTSF-209ENST00000533168 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
CTSF-209ENST00000533168 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
CTSF-209ENST00000533168 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
CTSF-209ENST00000533168 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
CTSF-209ENST00000533168 MARCH10Q8NA82 808 aaPredicted RBP18.95■□□□□ 0.62
CTSF-209ENST00000533168 C11orf95C9JLR9 678 aaPredicted RBP18.94■□□□□ 0.62
CTSF-209ENST00000533168 BCL11BQ9C0K0 894 aaPredicted RBP18.94■□□□□ 0.62
CTSF-209ENST00000533168 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CTSF-209ENST00000533168 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
CTSF-209ENST00000533168 ZBTB7AO95365 584 aa18.91■□□□□ 0.62
CTSF-209ENST00000533168 WDR17Q8IZU2 1322 aa18.91■□□□□ 0.62
CTSF-209ENST00000533168 MYOM1P52179 1685 aa18.9■□□□□ 0.62
CTSF-209ENST00000533168 PTGER2P43116 358 aa18.9■□□□□ 0.62
CTSF-209ENST00000533168 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
CTSF-209ENST00000533168 ARHGEF25Q86VW2 580 aa18.89■□□□□ 0.61
CTSF-209ENST00000533168 SOX12O15370 315 aa18.88■□□□□ 0.61
CTSF-209ENST00000533168 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
CTSF-209ENST00000533168 CPSF1Q10570 1443 aaKnown RBP18.88■□□□□ 0.61
CTSF-209ENST00000533168 BCL9O00512 1426 aa18.87■□□□□ 0.61
CTSF-209ENST00000533168 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
CTSF-209ENST00000533168 CARD10Q9BWT7 1032 aa18.86■□□□□ 0.61
CTSF-209ENST00000533168 TTC21BQ7Z4L5 1316 aa18.85■□□□□ 0.61
CTSF-209ENST00000533168 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
CTSF-209ENST00000533168 SLC15A2Q16348 729 aa18.84■□□□□ 0.61
CTSF-209ENST00000533168 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
CTSF-209ENST00000533168 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
CTSF-209ENST00000533168 EVC2Q86UK5 1308 aa18.82■□□□□ 0.6
CTSF-209ENST00000533168 EXOC5O00471 708 aa18.82■□□□□ 0.6
CTSF-209ENST00000533168 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
CTSF-209ENST00000533168 FHDC1Q9C0D6 1143 aaPredicted RBP18.82■□□□□ 0.6
CTSF-209ENST00000533168 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
CTSF-209ENST00000533168 NFAT5O94916 1531 aa18.82■□□□□ 0.6
CTSF-209ENST00000533168 ZNF784Q8NCA9 323 aaPredicted RBP18.81■□□□□ 0.6
CTSF-209ENST00000533168 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
CTSF-209ENST00000533168 SYT17Q9BSW7 474 aa18.81■□□□□ 0.6
CTSF-209ENST00000533168 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
CTSF-209ENST00000533168 SGIP1Q9BQI5 828 aa18.8■□□□□ 0.6
CTSF-209ENST00000533168 ZNF692Q9BU19 519 aaPredicted RBP18.8■□□□□ 0.6
CTSF-209ENST00000533168 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
CTSF-209ENST00000533168 NHSQ6T4R5 1651 aa18.78■□□□□ 0.6
CTSF-209ENST00000533168 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
CTSF-209ENST00000533168 KAT6BQ8WYB5 2073 aa18.77■□□□□ 0.6
CTSF-209ENST00000533168 TNS2Q63HR2 1409 aa18.77■□□□□ 0.6
CTSF-209ENST00000533168 MTFR1LQ9H019 292 aa18.77■□□□□ 0.6
CTSF-209ENST00000533168 CCDC7Q96M83 1385 aa18.77■□□□□ 0.6
CTSF-209ENST00000533168 CHD4Q14839 1912 aa18.76■□□□□ 0.59
CTSF-209ENST00000533168 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
CTSF-209ENST00000533168 PAPPAQ13219 1627 aa18.75■□□□□ 0.59
CTSF-209ENST00000533168 MON2Q7Z3U7 1717 aa18.74■□□□□ 0.59
CTSF-209ENST00000533168 BTAF1O14981 1849 aa18.74■□□□□ 0.59
CTSF-209ENST00000533168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
CTSF-209ENST00000533168 SIN3AQ96ST3 1273 aa18.74■□□□□ 0.59
CTSF-209ENST00000533168 LTN1O94822 1766 aa18.73■□□□□ 0.59
CTSF-209ENST00000533168 ABCC6O95255 1503 aa18.73■□□□□ 0.59
CTSF-209ENST00000533168 ZNF827Q17R98 1081 aa18.72■□□□□ 0.59
CTSF-209ENST00000533168 ARXQ96QS3 562 aa18.72■□□□□ 0.59
CTSF-209ENST00000533168 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
CTSF-209ENST00000533168 NLRP2Q9NX02 1062 aa18.72■□□□□ 0.59
CTSF-209ENST00000533168 ERBB3P21860 1342 aa18.72■□□□□ 0.59
CTSF-209ENST00000533168 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
CTSF-209ENST00000533168 NME9Q86XW9 330 aa18.71■□□□□ 0.59
CTSF-209ENST00000533168 USP31Q70CQ4 1352 aa18.7■□□□□ 0.58
CTSF-209ENST00000533168 CD163L1Q9NR16 1453 aa18.7■□□□□ 0.58
CTSF-209ENST00000533168 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
CTSF-209ENST00000533168 IL2RBP14784 551 aa18.69■□□□□ 0.58
CTSF-209ENST00000533168 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
CTSF-209ENST00000533168 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
CTSF-209ENST00000533168 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
CTSF-209ENST00000533168 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
CTSF-209ENST00000533168 AKT1S1Q96B36 256 aa18.65■□□□□ 0.58
CTSF-209ENST00000533168 CEP350Q5VT06 3117 aa18.65■□□□□ 0.58
CTSF-209ENST00000533168 KCNQ4P56696 695 aa18.64■□□□□ 0.57
CTSF-209ENST00000533168 C1QTNF8P60827 252 aa18.64■□□□□ 0.57
CTSF-209ENST00000533168 SLC12A5Q9H2X9 1139 aa18.64■□□□□ 0.57
CTSF-209ENST00000533168 TUBGCP6Q96RT7 1819 aa18.64■□□□□ 0.57
CTSF-209ENST00000533168 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
CTSF-209ENST00000533168 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
CTSF-209ENST00000533168 COL24A1Q17RW2 1714 aa18.63■□□□□ 0.57
CTSF-209ENST00000533168 QSER1Q2KHR3 1735 aa18.63■□□□□ 0.57
CTSF-209ENST00000533168 GPR162Q16538 588 aa18.62■□□□□ 0.57
CTSF-209ENST00000533168 DDX54Q8TDD1 881 aaKnown RBP18.62■□□□□ 0.57
CTSF-209ENST00000533168 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
CTSF-209ENST00000533168 KLHL34Q8N239 644 aa18.61■□□□□ 0.57
CTSF-209ENST00000533168 LTV1Q96GA3 475 aaPredicted RBP18.6■□□□□ 0.57
CTSF-209ENST00000533168 RGPD2P0DJD1 1756 aa18.58■□□□□ 0.57
CTSF-209ENST00000533168 SLC27A3Q5K4L6 730 aa18.58■□□□□ 0.56
CTSF-209ENST00000533168 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
CTSF-209ENST00000533168 NLGN2Q8NFZ4 835 aa18.58■□□□□ 0.56
CTSF-209ENST00000533168 SLC16A10Q8TF71 515 aa18.58■□□□□ 0.56
CTSF-209ENST00000533168 IP6K1Q92551 441 aa18.58■□□□□ 0.56
CTSF-209ENST00000533168 EDC4Q6P2E9 1401 aaKnown RBP18.57■□□□□ 0.56
CTSF-209ENST00000533168 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
CTSF-209ENST00000533168 FBLN1P23142 703 aa18.57■□□□□ 0.56
CTSF-209ENST00000533168 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
CTSF-209ENST00000533168 PELP1Q8IZL8 1130 aaKnown RBP18.57■□□□□ 0.56
CTSF-209ENST00000533168 LY75O60449 1722 aa18.57■□□□□ 0.56
CTSF-209ENST00000533168 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
CTSF-209ENST00000533168 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms