RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
NXF1-214ENST00000533048 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
NXF1-214ENST00000533048 NUDCQ9Y266 331 aa19.75■□□□□ 0.75
NXF1-214ENST00000533048 KIAA0232Q92628 1395 aa19.74■□□□□ 0.75
NXF1-214ENST00000533048 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
NXF1-214ENST00000533048 CAMTA1Q9Y6Y1 1673 aa19.74■□□□□ 0.75
NXF1-214ENST00000533048 JCADQ9P266 1359 aa19.73■□□□□ 0.75
NXF1-214ENST00000533048 RGPD5Q99666 1765 aa19.73■□□□□ 0.75
NXF1-214ENST00000533048 FAM208AQ9UK61 1670 aaKnown RBP19.73■□□□□ 0.75
NXF1-214ENST00000533048 NCAPD2Q15021 1401 aa19.71■□□□□ 0.75
NXF1-214ENST00000533048 COL14A1Q05707 1796 aaKnown RBP19.71■□□□□ 0.75
NXF1-214ENST00000533048 ZC3H6P61129 1189 aaKnown RBP19.71■□□□□ 0.75
NXF1-214ENST00000533048 KDRP35968 1356 aa19.7■□□□□ 0.74
NXF1-214ENST00000533048 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
NXF1-214ENST00000533048 PLEKHG5O94827 1062 aa19.68■□□□□ 0.74
NXF1-214ENST00000533048 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
NXF1-214ENST00000533048 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.744e-16■■■■■ 31.9
NXF1-214ENST00000533048 PRDM11Q9NQV5 511 aa19.68■□□□□ 0.74
NXF1-214ENST00000533048 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
NXF1-214ENST00000533048 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
NXF1-214ENST00000533048 FCHSD2O94868 740 aa19.67■□□□□ 0.74
NXF1-214ENST00000533048 HAP1P54257 671 aaPredicted RBP19.67■□□□□ 0.74
NXF1-214ENST00000533048 ERBB3P21860 1342 aa19.67■□□□□ 0.74
NXF1-214ENST00000533048 HSPA1LP34931 641 aa19.66■□□□□ 0.74
NXF1-214ENST00000533048 SPATA31A6Q5VVP1 1343 aa19.66■□□□□ 0.74
NXF1-214ENST00000533048 COL5A2P05997 1499 aaPredicted RBP19.66■□□□□ 0.74
NXF1-214ENST00000533048 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
NXF1-214ENST00000533048 RSPH6AQ9H0K4 717 aa19.65■□□□□ 0.74
NXF1-214ENST00000533048 PLCH1Q4KWH8 1693 aa19.65■□□□□ 0.74
NXF1-214ENST00000533048 CHRNA2Q15822 529 aa19.64■□□□□ 0.73
NXF1-214ENST00000533048 ANKRD24Q8TF21 1146 aa19.64■□□□□ 0.73
NXF1-214ENST00000533048 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.73
NXF1-214ENST00000533048 EYA1Q99502 592 aa19.64■□□□□ 0.73
NXF1-214ENST00000533048 PNNQ9H307 717 aaKnown RBP19.64■□□□□ 0.73
NXF1-214ENST00000533048 NWD2Q9ULI1 1742 aa19.63■□□□□ 0.73
NXF1-214ENST00000533048 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
NXF1-214ENST00000533048 RUNDC1Q96C34 613 aa19.63■□□□□ 0.73
NXF1-214ENST00000533048 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
NXF1-214ENST00000533048 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.73
NXF1-214ENST00000533048 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
NXF1-214ENST00000533048 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
NXF1-214ENST00000533048 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
NXF1-214ENST00000533048 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
NXF1-214ENST00000533048 PLEKHG2Q9H7P9 1386 aa19.6■□□□□ 0.73
NXF1-214ENST00000533048 ZBED9Q6R2W3 1325 aa19.6■□□□□ 0.73
NXF1-214ENST00000533048 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
NXF1-214ENST00000533048 LRP6O75581 1613 aa19.6■□□□□ 0.73
NXF1-214ENST00000533048 WDR17Q8IZU2 1322 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 HMOX1P09601 288 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 PRKAR2BP31323 418 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 NBPF6Q5VWK0 638 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 AEBP1Q8IUX7 1158 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 CCDC146Q8IYE0 955 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
NXF1-214ENST00000533048 NBPF4Q96M43 638 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 SLIT2O94813 1529 aa19.59■□□□□ 0.73
NXF1-214ENST00000533048 APAF1O14727 1248 aa19.56■□□□□ 0.72
NXF1-214ENST00000533048 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
NXF1-214ENST00000533048 TCP11L2Q8N4U5 519 aa19.55■□□□□ 0.72
NXF1-214ENST00000533048 PHF23Q9BUL5 403 aaPredicted RBP19.55■□□□□ 0.72
NXF1-214ENST00000533048 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.55■□□□□ 0.72
NXF1-214ENST00000533048 CRB1P82279 1406 aa19.54■□□□□ 0.72
NXF1-214ENST00000533048 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
NXF1-214ENST00000533048 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
NXF1-214ENST00000533048 ADAMTS2O95450 1211 aa19.54■□□□□ 0.72
NXF1-214ENST00000533048 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
NXF1-214ENST00000533048 FBXO41Q8TF61 875 aa19.54■□□□□ 0.72
NXF1-214ENST00000533048 BTG4Q9NY30 223 aa19.54■□□□□ 0.72
NXF1-214ENST00000533048 ZNF521Q96K83 1311 aa19.53■□□□□ 0.72
NXF1-214ENST00000533048 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
NXF1-214ENST00000533048 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
NXF1-214ENST00000533048 DLG5Q8TDM6 1919 aa19.53■□□□□ 0.72
NXF1-214ENST00000533048 NEFMP07197 916 aa19.52■□□□□ 0.72
NXF1-214ENST00000533048 CSB-PGBD3P0DP91 1061 aa19.52■□□□□ 0.72
NXF1-214ENST00000533048 USHBP1Q8N6Y0 703 aa19.52■□□□□ 0.72
NXF1-214ENST00000533048 CARD10Q9BWT7 1032 aa19.52■□□□□ 0.72
NXF1-214ENST00000533048 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
NXF1-214ENST00000533048 PARP4Q9UKK3 1724 aaKnown RBP19.51■□□□□ 0.71
NXF1-214ENST00000533048 TMPOP42166 694 aaKnown RBP19.51■□□□□ 0.71
NXF1-214ENST00000533048 NLRP2Q9NX02 1062 aa19.51■□□□□ 0.71
NXF1-214ENST00000533048 NFE2L2Q16236 605 aa19.5■□□□□ 0.71
NXF1-214ENST00000533048 WNK3Q9BYP7 1800 aa19.5■□□□□ 0.71
NXF1-214ENST00000533048 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
NXF1-214ENST00000533048 FNBP4Q8N3X1 1017 aaPredicted RBP19.49■□□□□ 0.71
NXF1-214ENST00000533048 MEGF6O75095 1541 aa19.49■□□□□ 0.71
NXF1-214ENST00000533048 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
NXF1-214ENST00000533048 EVA1CP58658 441 aa19.48■□□□□ 0.71
NXF1-214ENST00000533048 TOM1L2Q6ZVM7 507 aa19.48■□□□□ 0.71
NXF1-214ENST00000533048 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
NXF1-214ENST00000533048 OVOS2A0A0G2JMS6 1433 aa19.47■□□□□ 0.71
NXF1-214ENST00000533048 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
NXF1-214ENST00000533048 PDE3BQ13370 1112 aa19.46■□□□□ 0.71
NXF1-214ENST00000533048 WWC1Q8IX03 1113 aa19.46■□□□□ 0.71
NXF1-214ENST00000533048 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
NXF1-214ENST00000533048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.46■□□□□ 0.717e-6■■□□□ 12.8
NXF1-214ENST00000533048 AMOTQ4VCS5 1084 aa19.45■□□□□ 0.7
NXF1-214ENST00000533048 RAPGEF4Q8WZA2 1011 aa19.45■□□□□ 0.7
NXF1-214ENST00000533048 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
NXF1-214ENST00000533048 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
NXF1-214ENST00000533048 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms