RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 OVOS2A0A0J9YW53 1432 aa21.64■■□□□ 1.06
BRPF3-210ENST00000532538 OVOS2Q6IE36 1432 aa21.64■■□□□ 1.06
BRPF3-210ENST00000532538 COL18A1P39060 1754 aa21.64■■□□□ 1.06
BRPF3-210ENST00000532538 KAT6BQ8WYB5 2073 aa21.64■■□□□ 1.05
BRPF3-210ENST00000532538 LRRC37A3O60309 1634 aa21.64■■□□□ 1.05
BRPF3-210ENST00000532538 KTN1Q86UP2 1357 aaKnown RBP21.63■■□□□ 1.05
BRPF3-210ENST00000532538 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
BRPF3-210ENST00000532538 WDR17Q8IZU2 1322 aa21.61■■□□□ 1.05
BRPF3-210ENST00000532538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
BRPF3-210ENST00000532538 PPP1R1BQ9UD71 204 aaPredicted RBP21.61■■□□□ 1.05
BRPF3-210ENST00000532538 AXIN2Q9Y2T1 843 aa21.61■■□□□ 1.05
BRPF3-210ENST00000532538 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
BRPF3-210ENST00000532538 TMC1Q8TDI8 760 aa21.6■■□□□ 1.05
BRPF3-210ENST00000532538 CDCA7Q9BWT1 371 aaPredicted RBP21.59■■□□□ 1.05
BRPF3-210ENST00000532538 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
BRPF3-210ENST00000532538 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
BRPF3-210ENST00000532538 PEAK1Q9H792 1746 aa21.58■■□□□ 1.05
BRPF3-210ENST00000532538 ARHGEF25Q86VW2 580 aa21.58■■□□□ 1.05
BRPF3-210ENST00000532538 LTN1O94822 1766 aa21.56■■□□□ 1.04
BRPF3-210ENST00000532538 EXOC5O00471 708 aa21.56■■□□□ 1.04
BRPF3-210ENST00000532538 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
BRPF3-210ENST00000532538 CARD10Q9BWT7 1032 aa21.55■■□□□ 1.04
BRPF3-210ENST00000532538 SPON1Q9HCB6 807 aa21.55■■□□□ 1.04
BRPF3-210ENST00000532538 RGPD3A6NKT7 1758 aaPredicted RBP21.55■■□□□ 1.04
BRPF3-210ENST00000532538 RGPD4Q7Z3J3 1758 aa21.55■■□□□ 1.04
BRPF3-210ENST00000532538 BCL11BQ9C0K0 894 aaPredicted RBP21.54■■□□□ 1.04
BRPF3-210ENST00000532538 TONSLQ96HA7 1378 aa21.53■■□□□ 1.04
BRPF3-210ENST00000532538 DCAF8L1A6NGE4 600 aa21.53■■□□□ 1.04
BRPF3-210ENST00000532538 MARCH10Q8NA82 808 aaPredicted RBP21.53■■□□□ 1.04
BRPF3-210ENST00000532538 PLSCR1O15162 318 aa21.52■■□□□ 1.04
BRPF3-210ENST00000532538 KCNQ2O43526 872 aa21.51■■□□□ 1.03
BRPF3-210ENST00000532538 NLRP2Q9NX02 1062 aa21.51■■□□□ 1.03
BRPF3-210ENST00000532538 NFAT5O94916 1531 aa21.5■■□□□ 1.03
BRPF3-210ENST00000532538 CCDC7Q96M83 1385 aa21.5■■□□□ 1.03
BRPF3-210ENST00000532538 NME9Q86XW9 330 aa21.5■■□□□ 1.03
BRPF3-210ENST00000532538 PTF1AQ7RTS3 328 aa21.49■■□□□ 1.03
BRPF3-210ENST00000532538 TERF2IPQ9NYB0 399 aa21.48■■□□□ 1.03
BRPF3-210ENST00000532538 SLC12A5Q9H2X9 1139 aa21.47■■□□□ 1.03
BRPF3-210ENST00000532538 SBNO2Q9Y2G9 1366 aa21.47■■□□□ 1.03
BRPF3-210ENST00000532538 STK32BQ9NY57 414 aa21.46■■□□□ 1.03
BRPF3-210ENST00000532538 ABCC6O95255 1503 aa21.45■■□□□ 1.02
BRPF3-210ENST00000532538 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
BRPF3-210ENST00000532538 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
BRPF3-210ENST00000532538 USP31Q70CQ4 1352 aa21.44■■□□□ 1.02
BRPF3-210ENST00000532538 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
BRPF3-210ENST00000532538 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
BRPF3-210ENST00000532538 ANKRD24Q8TF21 1146 aa21.43■■□□□ 1.02
BRPF3-210ENST00000532538 TNS2Q63HR2 1409 aa21.43■■□□□ 1.02
BRPF3-210ENST00000532538 ZBTB7AO95365 584 aa21.42■■□□□ 1.02
BRPF3-210ENST00000532538 IL2RBP14784 551 aa21.42■■□□□ 1.02
BRPF3-210ENST00000532538 ERBB3P21860 1342 aa21.42■■□□□ 1.02
BRPF3-210ENST00000532538 EDC4Q6P2E9 1401 aaKnown RBP21.42■■□□□ 1.02
BRPF3-210ENST00000532538 LTV1Q96GA3 475 aaPredicted RBP21.42■■□□□ 1.02
BRPF3-210ENST00000532538 CASZ1Q86V15 1759 aa21.41■■□□□ 1.02
BRPF3-210ENST00000532538 NHSQ6T4R5 1651 aa21.41■■□□□ 1.02
BRPF3-210ENST00000532538 BCL9O00512 1426 aa21.41■■□□□ 1.02
BRPF3-210ENST00000532538 YY1P25490 414 aa21.41■■□□□ 1.02
BRPF3-210ENST00000532538 CD163L1Q9NR16 1453 aa21.4■■□□□ 1.02
BRPF3-210ENST00000532538 PROM2Q8N271 834 aa21.4■■□□□ 1.02
BRPF3-210ENST00000532538 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
BRPF3-210ENST00000532538 ATF5Q9Y2D1 282 aaPredicted RBP21.39■■□□□ 1.01
BRPF3-210ENST00000532538 BTAF1O14981 1849 aa21.39■■□□□ 1.01
BRPF3-210ENST00000532538 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
BRPF3-210ENST00000532538 SLC15A2Q16348 729 aa21.37■■□□□ 1.01
BRPF3-210ENST00000532538 PDGFDQ9GZP0 370 aaPredicted RBP21.37■■□□□ 1.01
BRPF3-210ENST00000532538 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
BRPF3-210ENST00000532538 COG3Q96JB2 828 aa21.36■■□□□ 1.01
BRPF3-210ENST00000532538 FAM208AQ9UK61 1670 aaKnown RBP21.36■■□□□ 1.01
BRPF3-210ENST00000532538 ST20-MTHFSA0A0A6YYL1 179 aa21.35■■□□□ 1.01
BRPF3-210ENST00000532538 AMPHP49418 695 aa21.35■■□□□ 1.01
BRPF3-210ENST00000532538 MYOM1P52179 1685 aa21.34■■□□□ 1.01
BRPF3-210ENST00000532538 RGPD2P0DJD1 1756 aa21.33■■□□□ 1.01
BRPF3-210ENST00000532538 SLC24A1O60721 1099 aa21.33■■□□□ 1.01
BRPF3-210ENST00000532538 IP6K1Q92551 441 aa21.33■■□□□ 1.01
BRPF3-210ENST00000532538 PUS7Q96PZ0 661 aaKnown RBP21.33■■□□□ 1.01
BRPF3-210ENST00000532538 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
BRPF3-210ENST00000532538 MTFR1LQ9H019 292 aa21.3■■□□□ 1
BRPF3-210ENST00000532538 FBLN1P23142 703 aa21.27■■□□□ 1
BRPF3-210ENST00000532538 TESK2Q96S53 571 aa21.27■■□□□ 1
BRPF3-210ENST00000532538 MAP3K19Q56UN5 1328 aa21.27■□□□□ 0.99
BRPF3-210ENST00000532538 HOXC9P31274 260 aa21.26■□□□□ 0.99
BRPF3-210ENST00000532538 PTGER2P43116 358 aa21.26■□□□□ 0.99
BRPF3-210ENST00000532538 TMF1P82094 1093 aa21.26■□□□□ 0.99
BRPF3-210ENST00000532538 DOT1LQ8TEK3 1739 aa21.26■□□□□ 0.99
BRPF3-210ENST00000532538 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
BRPF3-210ENST00000532538 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
BRPF3-210ENST00000532538 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
BRPF3-210ENST00000532538 ANKRD36BQ8N2N9 1353 aa21.23■□□□□ 0.99
BRPF3-210ENST00000532538 RRS1Q15050 365 aaKnown RBP21.23■□□□□ 0.99
BRPF3-210ENST00000532538 GGNBP2Q9H3C7 697 aa21.23■□□□□ 0.99
BRPF3-210ENST00000532538 CHD4Q14839 1912 aa21.23■□□□□ 0.99
BRPF3-210ENST00000532538 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
BRPF3-210ENST00000532538 ARXQ96QS3 562 aa21.22■□□□□ 0.99
BRPF3-210ENST00000532538 SYT17Q9BSW7 474 aa21.22■□□□□ 0.99
BRPF3-210ENST00000532538 PAPPAQ13219 1627 aa21.22■□□□□ 0.99
BRPF3-210ENST00000532538 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
BRPF3-210ENST00000532538 PRIM1P49642 420 aaKnown RBP21.21■□□□□ 0.99
BRPF3-210ENST00000532538 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
BRPF3-210ENST00000532538 SLC27A3Q5K4L6 730 aa21.21■□□□□ 0.99
BRPF3-210ENST00000532538 USP47Q96K76 1375 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms