RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 PTGER2P43116 358 aa12.17□□□□□ -0.46
NUP98-219ENST00000532475 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 PLSCR1O15162 318 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 ADGRB2O60241 1585 aa12.16□□□□□ -0.46
NUP98-219ENST00000532475 ACEP12821 1306 aa12.15□□□□□ -0.46
NUP98-219ENST00000532475 CEP350Q5VT06 3117 aa12.15□□□□□ -0.46
NUP98-219ENST00000532475 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
NUP98-219ENST00000532475 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
NUP98-219ENST00000532475 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
NUP98-219ENST00000532475 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
NUP98-219ENST00000532475 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
NUP98-219ENST00000532475 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
NUP98-219ENST00000532475 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
NUP98-219ENST00000532475 ADGRB1O14514 1584 aa12.14□□□□□ -0.47
NUP98-219ENST00000532475 GCP02774 474 aa12.14□□□□□ -0.47
NUP98-219ENST00000532475 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
NUP98-219ENST00000532475 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
NUP98-219ENST00000532475 EIF3AQ14152 1382 aaKnown RBP12.14□□□□□ -0.47
NUP98-219ENST00000532475 RREB1Q92766 1687 aa12.13□□□□□ -0.47
NUP98-219ENST00000532475 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
NUP98-219ENST00000532475 PODXL2Q9NZ53 605 aa12.13□□□□□ -0.47
NUP98-219ENST00000532475 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
NUP98-219ENST00000532475 ZBTB7CA1YPR0 619 aa12.12□□□□□ -0.47
NUP98-219ENST00000532475 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
NUP98-219ENST00000532475 CPDO75976 1380 aa12.11□□□□□ -0.47
NUP98-219ENST00000532475 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
NUP98-219ENST00000532475 DDB1Q16531 1140 aa12.11□□□□□ -0.47
NUP98-219ENST00000532475 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
NUP98-219ENST00000532475 ATP7BP35670 1465 aa12.1□□□□□ -0.47
NUP98-219ENST00000532475 POLR3AO14802 1390 aaPredicted RBP12.1□□□□□ -0.47
NUP98-219ENST00000532475 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
NUP98-219ENST00000532475 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
NUP98-219ENST00000532475 USP19O94966 1318 aa12.1□□□□□ -0.47
NUP98-219ENST00000532475 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
NUP98-219ENST00000532475 TXNRD1Q16881 649 aa12.09□□□□□ -0.47
NUP98-219ENST00000532475 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
NUP98-219ENST00000532475 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
NUP98-219ENST00000532475 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
NUP98-219ENST00000532475 TOM1L2Q6ZVM7 507 aa12.08□□□□□ -0.48
NUP98-219ENST00000532475 COL5A2P05997 1499 aaPredicted RBP12.08□□□□□ -0.48
NUP98-219ENST00000532475 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
NUP98-219ENST00000532475 OVOS2A0A0J9YW53 1432 aa12.07□□□□□ -0.48
NUP98-219ENST00000532475 OVOS2Q6IE36 1432 aa12.07□□□□□ -0.48
NUP98-219ENST00000532475 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
NUP98-219ENST00000532475 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
NUP98-219ENST00000532475 PHRF1Q9P1Y6 1649 aaKnown RBP12.07□□□□□ -0.48
NUP98-219ENST00000532475 CRB1P82279 1406 aa12.06□□□□□ -0.48
NUP98-219ENST00000532475 NLRP6P59044 892 aa12.06□□□□□ -0.48
NUP98-219ENST00000532475 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
NUP98-219ENST00000532475 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
NUP98-219ENST00000532475 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
NUP98-219ENST00000532475 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
NUP98-219ENST00000532475 PEAK1Q9H792 1746 aa12.04□□□□□ -0.48
NUP98-219ENST00000532475 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
NUP98-219ENST00000532475 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
NUP98-219ENST00000532475 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
NUP98-219ENST00000532475 MYOM1P52179 1685 aa12.03□□□□□ -0.48
NUP98-219ENST00000532475 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
NUP98-219ENST00000532475 NBPF1Q3BBV0 1214 aa12.03□□□□□ -0.48
NUP98-219ENST00000532475 CABP1Q9NZU7 370 aa12.03□□□□□ -0.48
NUP98-219ENST00000532475 EXOC5O00471 708 aa12.02□□□□□ -0.49
NUP98-219ENST00000532475 GPR162Q16538 588 aa12.02□□□□□ -0.49
NUP98-219ENST00000532475 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
NUP98-219ENST00000532475 PARP4Q9UKK3 1724 aaKnown RBP12.02□□□□□ -0.49
NUP98-219ENST00000532475 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
NUP98-219ENST00000532475 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
NUP98-219ENST00000532475 WDR17Q8IZU2 1322 aa12.01□□□□□ -0.49
NUP98-219ENST00000532475 SBF2Q86WG5 1849 aa12□□□□□ -0.49
NUP98-219ENST00000532475 SOX12O15370 315 aa12□□□□□ -0.49
NUP98-219ENST00000532475 ARHGEF25Q86VW2 580 aa12□□□□□ -0.49
NUP98-219ENST00000532475 CDCA7Q9BWT1 371 aaPredicted RBP12□□□□□ -0.49
NUP98-219ENST00000532475 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
NUP98-219ENST00000532475 BCL9O00512 1426 aa12□□□□□ -0.49
NUP98-219ENST00000532475 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
NUP98-219ENST00000532475 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
NUP98-219ENST00000532475 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
NUP98-219ENST00000532475 ZNF827Q17R98 1081 aa11.99□□□□□ -0.49
NUP98-219ENST00000532475 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
NUP98-219ENST00000532475 RAB3GAP2Q9H2M9 1393 aa11.98□□□□□ -0.49
NUP98-219ENST00000532475 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
NUP98-219ENST00000532475 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
NUP98-219ENST00000532475 ITSN1Q15811 1721 aa11.97□□□□□ -0.49
NUP98-219ENST00000532475 ARHGEF28Q8N1W1 1705 aaKnown RBP11.97□□□□□ -0.49
NUP98-219ENST00000532475 NLGN2Q8NFZ4 835 aa11.96□□□□□ -0.49
NUP98-219ENST00000532475 CHD4Q14839 1912 aa11.96□□□□□ -0.5
NUP98-219ENST00000532475 USP6P35125 1406 aa11.95□□□□□ -0.5
NUP98-219ENST00000532475 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
NUP98-219ENST00000532475 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
NUP98-219ENST00000532475 KCNQ4P56696 695 aa11.95□□□□□ -0.5
NUP98-219ENST00000532475 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
NUP98-219ENST00000532475 TOPAZ1Q8N9V7 1692 aa11.94□□□□□ -0.5
NUP98-219ENST00000532475 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
NUP98-219ENST00000532475 COL18A1P39060 1754 aa11.94□□□□□ -0.5
NUP98-219ENST00000532475 BRD4O60885 1362 aaPredicted RBP11.93□□□□□ -0.5
NUP98-219ENST00000532475 TTC21BQ7Z4L5 1316 aa11.93□□□□□ -0.5
NUP98-219ENST00000532475 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
NUP98-219ENST00000532475 YBX3P16989 372 aaKnown RBP eCLIP11.93□□□□□ -0.55e-10■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms