RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 AKAP12Q02952 1782 aa28.89■■■□□ 2.22
PTP4A2-214ENST00000532289 GPR162Q16538 588 aa28.89■■■□□ 2.22
PTP4A2-214ENST00000532289 ABTB2Q8N961 1025 aa28.88■■■□□ 2.21
PTP4A2-214ENST00000532289 WNK3Q9BYP7 1800 aa28.87■■■□□ 2.21
PTP4A2-214ENST00000532289 MARCH10Q8NA82 808 aaPredicted RBP28.87■■■□□ 2.21
PTP4A2-214ENST00000532289 ACEP12821 1306 aa28.86■■■□□ 2.21
PTP4A2-214ENST00000532289 TOPAZ1Q8N9V7 1692 aa28.86■■■□□ 2.21
PTP4A2-214ENST00000532289 AATKQ6ZMQ8 1374 aa28.86■■■□□ 2.21
PTP4A2-214ENST00000532289 GCP02774 474 aa28.85■■■□□ 2.21
PTP4A2-214ENST00000532289 NLRP13Q86W25 1043 aa28.8■■■□□ 2.2
PTP4A2-214ENST00000532289 ARHGEF28Q8N1W1 1705 aaKnown RBP28.8■■■□□ 2.2
PTP4A2-214ENST00000532289 PLEKHG3A1L390 1219 aa28.78■■■□□ 2.2
PTP4A2-214ENST00000532289 PAPPAQ13219 1627 aa28.78■■■□□ 2.2
PTP4A2-214ENST00000532289 TOM1L2Q6ZVM7 507 aa28.77■■■□□ 2.2
PTP4A2-214ENST00000532289 CDK19Q9BWU1 502 aa28.77■■■□□ 2.2
PTP4A2-214ENST00000532289 CDCA7Q9BWT1 371 aaPredicted RBP28.76■■■□□ 2.19
PTP4A2-214ENST00000532289 CCDC61Q9Y6R9 512 aa28.76■■■□□ 2.19
PTP4A2-214ENST00000532289 COL18A1P39060 1754 aa28.75■■■□□ 2.19
PTP4A2-214ENST00000532289 COL24A1Q17RW2 1714 aa28.72■■■□□ 2.19
PTP4A2-214ENST00000532289 ZBTB7CA1YPR0 619 aa28.71■■■□□ 2.19
PTP4A2-214ENST00000532289 PELP1Q8IZL8 1130 aaKnown RBP28.71■■■□□ 2.19
PTP4A2-214ENST00000532289 NHSQ6T4R5 1651 aa28.7■■■□□ 2.19
PTP4A2-214ENST00000532289 WDR17Q8IZU2 1322 aa28.7■■■□□ 2.19
PTP4A2-214ENST00000532289 SLIT3O75094 1523 aa28.68■■■□□ 2.18
PTP4A2-214ENST00000532289 KLHL34Q8N239 644 aa28.67■■■□□ 2.18
PTP4A2-214ENST00000532289 HSPA6P17066 643 aa28.66■■■□□ 2.18
PTP4A2-214ENST00000532289 ZNF827Q17R98 1081 aa28.66■■■□□ 2.18
PTP4A2-214ENST00000532289 AXIN2Q9Y2T1 843 aa28.66■■■□□ 2.18
PTP4A2-214ENST00000532289 QSER1Q2KHR3 1735 aa28.64■■■□□ 2.18
PTP4A2-214ENST00000532289 EXOC5O00471 708 aa28.64■■■□□ 2.18
PTP4A2-214ENST00000532289 RGPD5Q99666 1765 aa28.63■■■□□ 2.17
PTP4A2-214ENST00000532289 ATP10DQ9P241 1426 aa28.63■■■□□ 2.17
PTP4A2-214ENST00000532289 NLGN2Q8NFZ4 835 aa28.63■■■□□ 2.17
PTP4A2-214ENST00000532289 SLC16A10Q8TF71 515 aa28.63■■■□□ 2.17
PTP4A2-214ENST00000532289 BRD4O60885 1362 aaPredicted RBP28.62■■■□□ 2.17
PTP4A2-214ENST00000532289 POLD1P28340 1107 aa28.62■■■□□ 2.17
PTP4A2-214ENST00000532289 CARD10Q9BWT7 1032 aa28.62■■■□□ 2.17
PTP4A2-214ENST00000532289 KDM2AQ9Y2K7 1162 aa28.62■■■□□ 2.17
PTP4A2-214ENST00000532289 GRIN3BO60391 1043 aa28.61■■■□□ 2.17
PTP4A2-214ENST00000532289 BTAF1O14981 1849 aa28.6■■■□□ 2.17
PTP4A2-214ENST00000532289 YBX3P16989 372 aaKnown RBP eCLIP28.6■■■□□ 2.17
PTP4A2-214ENST00000532289 NLRP6P59044 892 aa28.6■■■□□ 2.17
PTP4A2-214ENST00000532289 DCAF11Q8TEB1 546 aa28.58■■■□□ 2.17
PTP4A2-214ENST00000532289 LRRC4BQ9NT99 713 aa28.58■■■□□ 2.17
PTP4A2-214ENST00000532289 TNS2Q63HR2 1409 aa28.58■■■□□ 2.17
PTP4A2-214ENST00000532289 PPIP5K1Q6PFW1 1433 aa28.58■■■□□ 2.17
PTP4A2-214ENST00000532289 AKT1S1Q96B36 256 aa28.57■■■□□ 2.16
PTP4A2-214ENST00000532289 ACSBG1Q96GR2 724 aa28.57■■■□□ 2.16
PTP4A2-214ENST00000532289 TRPM1Q7Z4N2 1603 aa28.55■■■□□ 2.16
PTP4A2-214ENST00000532289 CPSF1Q10570 1443 aaKnown RBP28.55■■■□□ 2.16
PTP4A2-214ENST00000532289 GPBP1L1Q9HC44 474 aaPredicted RBP28.55■■■□□ 2.16
PTP4A2-214ENST00000532289 USP6P35125 1406 aa28.54■■■□□ 2.16
PTP4A2-214ENST00000532289 STAC3Q96MF2 364 aa28.53■■■□□ 2.16
PTP4A2-214ENST00000532289 PIK3C2AO00443 1686 aa28.53■■■□□ 2.16
PTP4A2-214ENST00000532289 PNPLA7Q6ZV29 1317 aa28.52■■■□□ 2.16
PTP4A2-214ENST00000532289 ARHGEF25Q86VW2 580 aa28.52■■■□□ 2.16
PTP4A2-214ENST00000532289 ABCC6O95255 1503 aa28.52■■■□□ 2.16
PTP4A2-214ENST00000532289 TUBGCP6Q96RT7 1819 aa28.52■■■□□ 2.16
PTP4A2-214ENST00000532289 CCDC7Q96M83 1385 aa28.51■■■□□ 2.16
PTP4A2-214ENST00000532289 CSB-PGBD3P0DP91 1061 aa28.51■■■□□ 2.15
PTP4A2-214ENST00000532289 KAT6BQ8WYB5 2073 aa28.49■■■□□ 2.15
PTP4A2-214ENST00000532289 ADCY9O60503 1353 aa28.49■■■□□ 2.15
PTP4A2-214ENST00000532289 SRPK2P78362 688 aaKnown RBP28.46■■■□□ 2.15
PTP4A2-214ENST00000532289 SLC27A3Q5K4L6 730 aa28.44■■■□□ 2.14
PTP4A2-214ENST00000532289 CABP2Q9NPB3 220 aa28.43■■■□□ 2.14
PTP4A2-214ENST00000532289 KCNH5Q8NCM2 988 aa28.42■■■□□ 2.14
PTP4A2-214ENST00000532289 ZNF526Q8TF50 670 aaPredicted RBP28.42■■■□□ 2.14
PTP4A2-214ENST00000532289 TFCP2L1Q9NZI6 479 aa28.42■■■□□ 2.14
PTP4A2-214ENST00000532289 CABP1Q9NZU7 370 aa28.42■■■□□ 2.14
PTP4A2-214ENST00000532289 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
PTP4A2-214ENST00000532289 NFAT5O94916 1531 aa28.37■■■□□ 2.13
PTP4A2-214ENST00000532289 KIAA1210Q9ULL0 1709 aa28.36■■■□□ 2.13
PTP4A2-214ENST00000532289 SOX12O15370 315 aa28.36■■■□□ 2.13
PTP4A2-214ENST00000532289 DNAJC5GQ8N7S2 189 aa28.35■■■□□ 2.13
PTP4A2-214ENST00000532289 IL2RBP14784 551 aa28.34■■■□□ 2.13
PTP4A2-214ENST00000532289 APLP1P51693 650 aa28.34■■■□□ 2.13
PTP4A2-214ENST00000532289 KIF3CO14782 793 aa28.33■■■□□ 2.13
PTP4A2-214ENST00000532289 LY75O60449 1722 aa28.32■■■□□ 2.12
PTP4A2-214ENST00000532289 KCNQ4P56696 695 aa28.32■■■□□ 2.12
PTP4A2-214ENST00000532289 TTC21BQ7Z4L5 1316 aa28.3■■■□□ 2.12
PTP4A2-214ENST00000532289 CD2APQ9Y5K6 639 aa28.3■■■□□ 2.12
PTP4A2-214ENST00000532289 CENPJQ9HC77 1338 aaPredicted RBP28.29■■■□□ 2.12
PTP4A2-214ENST00000532289 NLRP2Q9NX02 1062 aa28.29■■■□□ 2.12
PTP4A2-214ENST00000532289 ERBB3P21860 1342 aa28.28■■■□□ 2.12
PTP4A2-214ENST00000532289 COL23A1Q86Y22 540 aaPredicted RBP28.27■■■□□ 2.12
PTP4A2-214ENST00000532289 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
PTP4A2-214ENST00000532289 TTC21AQ8NDW8 1320 aa28.24■■■□□ 2.11
PTP4A2-214ENST00000532289 MSH5O43196 834 aa28.24■■■□□ 2.11
PTP4A2-214ENST00000532289 COL13A1Q5TAT6 717 aaPredicted RBP28.24■■■□□ 2.11
PTP4A2-214ENST00000532289 MSL1Q68DK7 614 aa28.23■■■□□ 2.11
PTP4A2-214ENST00000532289 ZNF692Q9BU19 519 aaPredicted RBP28.23■■■□□ 2.11
PTP4A2-214ENST00000532289 CAPN15O75808 1086 aa28.2■■■□□ 2.1
PTP4A2-214ENST00000532289 LTN1O94822 1766 aa28.19■■■□□ 2.1
PTP4A2-214ENST00000532289 DOT1LQ8TEK3 1739 aa28.18■■■□□ 2.1
PTP4A2-214ENST00000532289 PRIM1P49642 420 aaKnown RBP28.18■■■□□ 2.1
PTP4A2-214ENST00000532289 DDX54Q8TDD1 881 aaKnown RBP28.18■■■□□ 2.1
PTP4A2-214ENST00000532289 NSD2O96028 1365 aa28.18■■■□□ 2.1
PTP4A2-214ENST00000532289 ANKRD36BQ8N2N9 1353 aa28.18■■■□□ 2.1
PTP4A2-214ENST00000532289 TOMM70O94826 608 aa28.17■■■□□ 2.1
PTP4A2-214ENST00000532289 SYTL4Q96C24 671 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms