RNA–Protein interactions for RNA: ENST00000531648.5

C11orf49-217, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-217ENST00000531648 PLCH1Q4KWH8 1693 aa13.61□□□□□ -0.23
C11orf49-217ENST00000531648 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
C11orf49-217ENST00000531648 AMPHP49418 695 aa13.6□□□□□ -0.23
C11orf49-217ENST00000531648 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
C11orf49-217ENST00000531648 BARGINQ6ZT62 677 aa13.6□□□□□ -0.23
C11orf49-217ENST00000531648 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
C11orf49-217ENST00000531648 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
C11orf49-217ENST00000531648 IP6K1Q92551 441 aa13.59□□□□□ -0.23
C11orf49-217ENST00000531648 NLRP2Q9NX02 1062 aa13.59□□□□□ -0.23
C11orf49-217ENST00000531648 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
C11orf49-217ENST00000531648 WDR17Q8IZU2 1322 aa13.59□□□□□ -0.23
C11orf49-217ENST00000531648 NSD3Q9BZ95 1437 aa13.58□□□□□ -0.24
C11orf49-217ENST00000531648 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
C11orf49-217ENST00000531648 COL5A2P05997 1499 aaPredicted RBP13.58□□□□□ -0.24
C11orf49-217ENST00000531648 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
C11orf49-217ENST00000531648 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
C11orf49-217ENST00000531648 OVOS2A0A0J9YW53 1432 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 OVOS2Q6IE36 1432 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
C11orf49-217ENST00000531648 CARD10Q9BWT7 1032 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
C11orf49-217ENST00000531648 CRB1P82279 1406 aa13.56□□□□□ -0.24
C11orf49-217ENST00000531648 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
C11orf49-217ENST00000531648 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
C11orf49-217ENST00000531648 NFAT5O94916 1531 aa13.55□□□□□ -0.24
C11orf49-217ENST00000531648 HOXC9P31274 260 aa13.55□□□□□ -0.24
C11orf49-217ENST00000531648 SF3B2Q13435 895 aaKnown RBP13.55□□□□□ -0.24
C11orf49-217ENST00000531648 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
C11orf49-217ENST00000531648 DDB1Q16531 1140 aa13.54□□□□□ -0.24
C11orf49-217ENST00000531648 HSP90AB2PQ58FF8 381 aa13.54□□□□□ -0.24
C11orf49-217ENST00000531648 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
C11orf49-217ENST00000531648 ERBB3P21860 1342 aa13.54□□□□□ -0.24
C11orf49-217ENST00000531648 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
C11orf49-217ENST00000531648 EXOC5O00471 708 aa13.53□□□□□ -0.24
C11orf49-217ENST00000531648 CNGB1Q14028 1251 aaPredicted RBP13.53□□□□□ -0.24
C11orf49-217ENST00000531648 FAM196AQ6ZSG2 479 aa13.53□□□□□ -0.24
C11orf49-217ENST00000531648 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
C11orf49-217ENST00000531648 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
C11orf49-217ENST00000531648 TRIM37O94972 964 aa13.52□□□□□ -0.25
C11orf49-217ENST00000531648 COL18A1P39060 1754 aa13.51□□□□□ -0.25
C11orf49-217ENST00000531648 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
C11orf49-217ENST00000531648 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
C11orf49-217ENST00000531648 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
C11orf49-217ENST00000531648 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 IL2RBP14784 551 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
C11orf49-217ENST00000531648 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 POLKQ9UBT6 870 aa13.49□□□□□ -0.25
C11orf49-217ENST00000531648 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
C11orf49-217ENST00000531648 EN1Q05925 392 aaPredicted RBP13.48□□□□□ -0.25
C11orf49-217ENST00000531648 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
C11orf49-217ENST00000531648 MYOM1P52179 1685 aa13.47□□□□□ -0.25
C11orf49-217ENST00000531648 PER1O15534 1290 aaPredicted RBP13.47□□□□□ -0.25
C11orf49-217ENST00000531648 APBA3O96018 575 aa13.47□□□□□ -0.25
C11orf49-217ENST00000531648 BAG6P46379 1132 aa13.47□□□□□ -0.25
C11orf49-217ENST00000531648 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
C11orf49-217ENST00000531648 DDX54Q8TDD1 881 aaKnown RBP13.47□□□□□ -0.25
C11orf49-217ENST00000531648 EP400Q96L91 3159 aa13.47□□□□□ -0.25
C11orf49-217ENST00000531648 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
C11orf49-217ENST00000531648 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
C11orf49-217ENST00000531648 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
C11orf49-217ENST00000531648 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
C11orf49-217ENST00000531648 INSRP06213 1382 aa13.45□□□□□ -0.26
C11orf49-217ENST00000531648 FLT4P35916 1363 aa13.45□□□□□ -0.26
C11orf49-217ENST00000531648 PTF1AQ7RTS3 328 aa13.44□□□□□ -0.26
C11orf49-217ENST00000531648 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
C11orf49-217ENST00000531648 DISP2A7MBM2 1401 aa13.43□□□□□ -0.26
C11orf49-217ENST00000531648 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
C11orf49-217ENST00000531648 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
C11orf49-217ENST00000531648 ACSBG1Q96GR2 724 aa13.43□□□□□ -0.26
C11orf49-217ENST00000531648 ABCC6O95255 1503 aa13.43□□□□□ -0.26
C11orf49-217ENST00000531648 SMG6Q86US8 1419 aaKnown RBP13.42□□□□□ -0.26
C11orf49-217ENST00000531648 KCNQ2O43526 872 aa13.42□□□□□ -0.26
C11orf49-217ENST00000531648 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
C11orf49-217ENST00000531648 EYA1Q99502 592 aa13.42□□□□□ -0.26
C11orf49-217ENST00000531648 LTN1O94822 1766 aa13.42□□□□□ -0.26
C11orf49-217ENST00000531648 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
C11orf49-217ENST00000531648 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
C11orf49-217ENST00000531648 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
C11orf49-217ENST00000531648 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
C11orf49-217ENST00000531648 BCL11BQ9C0K0 894 aaPredicted RBP13.41□□□□□ -0.26
C11orf49-217ENST00000531648 NSD2O96028 1365 aa13.41□□□□□ -0.26
C11orf49-217ENST00000531648 MTHFSP49914 203 aa13.4□□□□□ -0.26
C11orf49-217ENST00000531648 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
C11orf49-217ENST00000531648 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
C11orf49-217ENST00000531648 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
C11orf49-217ENST00000531648 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
C11orf49-217ENST00000531648 PEAK1Q9H792 1746 aa13.36□□□□□ -0.27
C11orf49-217ENST00000531648 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
C11orf49-217ENST00000531648 ZEB1P37275 1124 aaPredicted RBP13.36□□□□□ -0.27
C11orf49-217ENST00000531648 TNS2Q63HR2 1409 aa13.36□□□□□ -0.27
C11orf49-217ENST00000531648 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
C11orf49-217ENST00000531648 MEGF6O75095 1541 aa13.35□□□□□ -0.27
C11orf49-217ENST00000531648 PLSCR1O15162 318 aa13.35□□□□□ -0.27
C11orf49-217ENST00000531648 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
C11orf49-217ENST00000531648 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms