RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 DDB1Q16531 1140 aa26.08■■□□□ 1.77
SCN4B-205ENST00000531550 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
SCN4B-205ENST00000531550 CABP1Q9NZU7 370 aa26.07■■□□□ 1.76
SCN4B-205ENST00000531550 TOM1L2Q6ZVM7 507 aa26.06■■□□□ 1.76
SCN4B-205ENST00000531550 AKAP12Q02952 1782 aa26.05■■□□□ 1.76
SCN4B-205ENST00000531550 PTF1AQ7RTS3 328 aa26.04■■□□□ 1.76
SCN4B-205ENST00000531550 BCL11BQ9C0K0 894 aaPredicted RBP26.04■■□□□ 1.76
SCN4B-205ENST00000531550 CPSF1Q10570 1443 aaKnown RBP26.04■■□□□ 1.76
SCN4B-205ENST00000531550 WDR17Q8IZU2 1322 aa26.03■■□□□ 1.76
SCN4B-205ENST00000531550 DCAF8L1A6NGE4 600 aa26.02■■□□□ 1.76
SCN4B-205ENST00000531550 AXIN2Q9Y2T1 843 aa26.02■■□□□ 1.76
SCN4B-205ENST00000531550 BCL9O00512 1426 aa26.02■■□□□ 1.76
SCN4B-205ENST00000531550 MARCH10Q8NA82 808 aaPredicted RBP26■■□□□ 1.75
SCN4B-205ENST00000531550 CDCA7Q9BWT1 371 aaPredicted RBP25.99■■□□□ 1.75
SCN4B-205ENST00000531550 RGPD5Q99666 1765 aa25.99■■□□□ 1.75
SCN4B-205ENST00000531550 TRPM1Q7Z4N2 1603 aa25.99■■□□□ 1.75
SCN4B-205ENST00000531550 PROM2Q8N271 834 aa25.98■■□□□ 1.75
SCN4B-205ENST00000531550 PDGFDQ9GZP0 370 aaPredicted RBP25.98■■□□□ 1.75
SCN4B-205ENST00000531550 MYOM1P52179 1685 aa25.98■■□□□ 1.75
SCN4B-205ENST00000531550 ARHGEF25Q86VW2 580 aa25.96■■□□□ 1.75
SCN4B-205ENST00000531550 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
SCN4B-205ENST00000531550 TTC21BQ7Z4L5 1316 aa25.94■■□□□ 1.74
SCN4B-205ENST00000531550 ZBTB7AO95365 584 aa25.94■■□□□ 1.74
SCN4B-205ENST00000531550 KCNH5Q8NCM2 988 aa25.94■■□□□ 1.74
SCN4B-205ENST00000531550 CARD10Q9BWT7 1032 aa25.94■■□□□ 1.74
SCN4B-205ENST00000531550 NFAT5O94916 1531 aa25.93■■□□□ 1.74
SCN4B-205ENST00000531550 CSB-PGBD3P0DP91 1061 aa25.92■■□□□ 1.74
SCN4B-205ENST00000531550 SOX12O15370 315 aa25.91■■□□□ 1.74
SCN4B-205ENST00000531550 PTGER2P43116 358 aa25.91■■□□□ 1.74
SCN4B-205ENST00000531550 TXNRD1Q16881 649 aa25.91■■□□□ 1.74
SCN4B-205ENST00000531550 TNS2Q63HR2 1409 aa25.9■■□□□ 1.74
SCN4B-205ENST00000531550 ABCC6O95255 1503 aa25.9■■□□□ 1.74
SCN4B-205ENST00000531550 ZNF692Q9BU19 519 aaPredicted RBP25.9■■□□□ 1.74
SCN4B-205ENST00000531550 STK32BQ9NY57 414 aa25.9■■□□□ 1.74
SCN4B-205ENST00000531550 TTC21AQ8NDW8 1320 aa25.89■■□□□ 1.74
SCN4B-205ENST00000531550 NHSQ6T4R5 1651 aa25.88■■□□□ 1.73
SCN4B-205ENST00000531550 CCDC7Q96M83 1385 aa25.88■■□□□ 1.73
SCN4B-205ENST00000531550 EXOC5O00471 708 aa25.88■■□□□ 1.73
SCN4B-205ENST00000531550 ATF5Q9Y2D1 282 aaPredicted RBP25.88■■□□□ 1.73
SCN4B-205ENST00000531550 SLC15A2Q16348 729 aa25.87■■□□□ 1.73
SCN4B-205ENST00000531550 L3MBTL2Q969R5 705 aa25.86■■□□□ 1.73
SCN4B-205ENST00000531550 MON2Q7Z3U7 1717 aa25.85■■□□□ 1.73
SCN4B-205ENST00000531550 KTN1Q86UP2 1357 aaKnown RBP25.82■■□□□ 1.72
SCN4B-205ENST00000531550 PAPPAQ13219 1627 aa25.82■■□□□ 1.72
SCN4B-205ENST00000531550 FHDC1Q9C0D6 1143 aaPredicted RBP25.82■■□□□ 1.72
SCN4B-205ENST00000531550 MTFR1LQ9H019 292 aa25.82■■□□□ 1.72
SCN4B-205ENST00000531550 ROCK2O75116 1388 aaKnown RBP25.82■■□□□ 1.72
SCN4B-205ENST00000531550 USP54Q70EL1 1684 aa25.81■■□□□ 1.72
SCN4B-205ENST00000531550 SGIP1Q9BQI5 828 aa25.8■■□□□ 1.72
SCN4B-205ENST00000531550 SYT17Q9BSW7 474 aa25.8■■□□□ 1.72
SCN4B-205ENST00000531550 ZNF784Q8NCA9 323 aaPredicted RBP25.78■■□□□ 1.72
SCN4B-205ENST00000531550 ACSBG1Q96GR2 724 aa25.78■■□□□ 1.72
SCN4B-205ENST00000531550 ERBB3P21860 1342 aa25.78■■□□□ 1.72
SCN4B-205ENST00000531550 USP31Q70CQ4 1352 aa25.77■■□□□ 1.72
SCN4B-205ENST00000531550 LTN1O94822 1766 aa25.77■■□□□ 1.72
SCN4B-205ENST00000531550 BTAF1O14981 1849 aa25.77■■□□□ 1.72
SCN4B-205ENST00000531550 UTRNP46939 3433 aa25.75■■□□□ 1.71
SCN4B-205ENST00000531550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.74■■□□□ 1.71
SCN4B-205ENST00000531550 NLRP2Q9NX02 1062 aa25.74■■□□□ 1.71
SCN4B-205ENST00000531550 CD163L1Q9NR16 1453 aa25.73■■□□□ 1.71
SCN4B-205ENST00000531550 IL2RBP14784 551 aa25.73■■□□□ 1.71
SCN4B-205ENST00000531550 SIN3AQ96ST3 1273 aa25.72■■□□□ 1.71
SCN4B-205ENST00000531550 CHD4Q14839 1912 aa25.72■■□□□ 1.71
SCN4B-205ENST00000531550 SBNO2Q9Y2G9 1366 aa25.71■■□□□ 1.71
SCN4B-205ENST00000531550 NME9Q86XW9 330 aa25.71■■□□□ 1.71
SCN4B-205ENST00000531550 ARXQ96QS3 562 aa25.71■■□□□ 1.71
SCN4B-205ENST00000531550 MAP3K5Q99683 1374 aa25.7■■□□□ 1.71
SCN4B-205ENST00000531550 ZNF827Q17R98 1081 aa25.7■■□□□ 1.7
SCN4B-205ENST00000531550 ANKRD24Q8TF21 1146 aa25.69■■□□□ 1.7
SCN4B-205ENST00000531550 LRRC4BQ9NT99 713 aa25.67■■□□□ 1.7
SCN4B-205ENST00000531550 QSER1Q2KHR3 1735 aa25.66■■□□□ 1.7
SCN4B-205ENST00000531550 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
SCN4B-205ENST00000531550 EDC4Q6P2E9 1401 aaKnown RBP25.64■■□□□ 1.7
SCN4B-205ENST00000531550 FAM208AQ9UK61 1670 aaKnown RBP25.63■■□□□ 1.69
SCN4B-205ENST00000531550 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
SCN4B-205ENST00000531550 TMC1Q8TDI8 760 aa25.62■■□□□ 1.69
SCN4B-205ENST00000531550 AKT1S1Q96B36 256 aa25.62■■□□□ 1.69
SCN4B-205ENST00000531550 COL24A1Q17RW2 1714 aa25.61■■□□□ 1.69
SCN4B-205ENST00000531550 SLC12A5Q9H2X9 1139 aa25.6■■□□□ 1.69
SCN4B-205ENST00000531550 TUBGCP6Q96RT7 1819 aa25.6■■□□□ 1.69
SCN4B-205ENST00000531550 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
SCN4B-205ENST00000531550 KAT6BQ8WYB5 2073 aa25.59■■□□□ 1.69
SCN4B-205ENST00000531550 SLC27A3Q5K4L6 730 aa25.59■■□□□ 1.69
SCN4B-205ENST00000531550 SENP3-EIF4A1A0A087X0R7 540 aa25.58■■□□□ 1.69
SCN4B-205ENST00000531550 SLC16A10Q8TF71 515 aa25.58■■□□□ 1.69
SCN4B-205ENST00000531550 C1QTNF8P60827 252 aa25.57■■□□□ 1.68
SCN4B-205ENST00000531550 GPR162Q16538 588 aa25.57■■□□□ 1.68
SCN4B-205ENST00000531550 DDX54Q8TDD1 881 aaKnown RBP25.57■■□□□ 1.68
SCN4B-205ENST00000531550 CARD11Q9BXL7 1154 aa25.57■■□□□ 1.68
SCN4B-205ENST00000531550 PNPLA7Q6ZV29 1317 aa25.57■■□□□ 1.68
SCN4B-205ENST00000531550 DOT1LQ8TEK3 1739 aa25.57■■□□□ 1.68
SCN4B-205ENST00000531550 IP6K1Q92551 441 aa25.56■■□□□ 1.68
SCN4B-205ENST00000531550 POLD1P28340 1107 aa25.55■■□□□ 1.68
SCN4B-205ENST00000531550 KLHL34Q8N239 644 aa25.55■■□□□ 1.68
SCN4B-205ENST00000531550 TERF2IPQ9NYB0 399 aa25.55■■□□□ 1.68
SCN4B-205ENST00000531550 LY75O60449 1722 aa25.54■■□□□ 1.68
SCN4B-205ENST00000531550 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
SCN4B-205ENST00000531550 SHANK3Q9BYB0 1731 aa25.54■■□□□ 1.68
SCN4B-205ENST00000531550 ANKRD36BQ8N2N9 1353 aa25.53■■□□□ 1.68
SCN4B-205ENST00000531550 NSD2O96028 1365 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms