RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RGPD4Q7Z3J3 1758 aa26.4■■□□□ 1.82
SSSCA1-206ENST00000531405 OVOS2A0A0G2JMS6 1433 aa26.39■■□□□ 1.82
SSSCA1-206ENST00000531405 OVOS2A0A0J9YW53 1432 aa26.39■■□□□ 1.82
SSSCA1-206ENST00000531405 OVOS2Q6IE36 1432 aa26.39■■□□□ 1.82
SSSCA1-206ENST00000531405 NFAT5O94916 1531 aa26.37■■□□□ 1.81
SSSCA1-206ENST00000531405 WDR17Q8IZU2 1322 aa26.37■■□□□ 1.81
SSSCA1-206ENST00000531405 ZNF692Q9BU19 519 aaPredicted RBP26.36■■□□□ 1.81
SSSCA1-206ENST00000531405 LTN1O94822 1766 aa26.35■■□□□ 1.81
SSSCA1-206ENST00000531405 DDB1Q16531 1140 aa26.35■■□□□ 1.81
SSSCA1-206ENST00000531405 ARHGEF25Q86VW2 580 aa26.35■■□□□ 1.81
SSSCA1-206ENST00000531405 KTN1Q86UP2 1357 aaKnown RBP26.34■■□□□ 1.81
SSSCA1-206ENST00000531405 TTC21AQ8NDW8 1320 aa26.34■■□□□ 1.81
SSSCA1-206ENST00000531405 NBPF14Q5TI25 921 aa26.33■■□□□ 1.81
SSSCA1-206ENST00000531405 KCNH5Q8NCM2 988 aa26.33■■□□□ 1.81
SSSCA1-206ENST00000531405 USP54Q70EL1 1684 aa26.32■■□□□ 1.8
SSSCA1-206ENST00000531405 PTF1AQ7RTS3 328 aa26.32■■□□□ 1.8
SSSCA1-206ENST00000531405 C11orf95C9JLR9 678 aaPredicted RBP26.31■■□□□ 1.8
SSSCA1-206ENST00000531405 CSB-PGBD3P0DP91 1061 aa26.29■■□□□ 1.8
SSSCA1-206ENST00000531405 MARCH10Q8NA82 808 aaPredicted RBP26.29■■□□□ 1.8
SSSCA1-206ENST00000531405 CD163L1Q9NR16 1453 aa26.28■■□□□ 1.8
SSSCA1-206ENST00000531405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.27■■□□□ 1.8
SSSCA1-206ENST00000531405 CARD10Q9BWT7 1032 aa26.27■■□□□ 1.8
SSSCA1-206ENST00000531405 SBNO2Q9Y2G9 1366 aa26.27■■□□□ 1.8
SSSCA1-206ENST00000531405 ABCC6O95255 1503 aa26.27■■□□□ 1.8
SSSCA1-206ENST00000531405 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
SSSCA1-206ENST00000531405 CDCA7Q9BWT1 371 aaPredicted RBP26.25■■□□□ 1.79
SSSCA1-206ENST00000531405 CARD11Q9BXL7 1154 aa26.25■■□□□ 1.79
SSSCA1-206ENST00000531405 KAT6BQ8WYB5 2073 aa26.24■■□□□ 1.79
SSSCA1-206ENST00000531405 PLSCR1O15162 318 aa26.24■■□□□ 1.79
SSSCA1-206ENST00000531405 BCL11BQ9C0K0 894 aaPredicted RBP26.24■■□□□ 1.79
SSSCA1-206ENST00000531405 NME9Q86XW9 330 aa26.23■■□□□ 1.79
SSSCA1-206ENST00000531405 ANO8Q9HCE9 1232 aaPredicted RBP26.22■■□□□ 1.79
SSSCA1-206ENST00000531405 BCL9O00512 1426 aa26.22■■□□□ 1.79
SSSCA1-206ENST00000531405 USP31Q70CQ4 1352 aa26.21■■□□□ 1.79
SSSCA1-206ENST00000531405 TMC1Q8TDI8 760 aa26.21■■□□□ 1.79
SSSCA1-206ENST00000531405 CCDC7Q96M83 1385 aa26.2■■□□□ 1.79
SSSCA1-206ENST00000531405 NHSQ6T4R5 1651 aa26.2■■□□□ 1.78
SSSCA1-206ENST00000531405 SPON1Q9HCB6 807 aa26.19■■□□□ 1.78
SSSCA1-206ENST00000531405 TNS2Q63HR2 1409 aa26.19■■□□□ 1.78
SSSCA1-206ENST00000531405 EXOC5O00471 708 aa26.18■■□□□ 1.78
SSSCA1-206ENST00000531405 KCNQ2O43526 872 aa26.18■■□□□ 1.78
SSSCA1-206ENST00000531405 PROM2Q8N271 834 aa26.18■■□□□ 1.78
SSSCA1-206ENST00000531405 SLC12A5Q9H2X9 1139 aa26.18■■□□□ 1.78
SSSCA1-206ENST00000531405 PPP1R1BQ9UD71 204 aaPredicted RBP26.17■■□□□ 1.78
SSSCA1-206ENST00000531405 TONSLQ96HA7 1378 aa26.16■■□□□ 1.78
SSSCA1-206ENST00000531405 ERBB3P21860 1342 aa26.15■■□□□ 1.78
SSSCA1-206ENST00000531405 HDGFL2Q7Z4V5 671 aaPredicted RBP26.15■■□□□ 1.78
SSSCA1-206ENST00000531405 PDGFDQ9GZP0 370 aaPredicted RBP26.15■■□□□ 1.78
SSSCA1-206ENST00000531405 BTAF1O14981 1849 aa26.15■■□□□ 1.78
SSSCA1-206ENST00000531405 EDC4Q6P2E9 1401 aaKnown RBP26.14■■□□□ 1.78
SSSCA1-206ENST00000531405 NLRP2Q9NX02 1062 aa26.14■■□□□ 1.78
SSSCA1-206ENST00000531405 A0A1W2PP64 1363 aa26.14■■□□□ 1.78
SSSCA1-206ENST00000531405 MYOM1P52179 1685 aa26.12■■□□□ 1.77
SSSCA1-206ENST00000531405 TXNRD1Q16881 649 aa26.11■■□□□ 1.77
SSSCA1-206ENST00000531405 RGPD2P0DJD1 1756 aa26.1■■□□□ 1.77
SSSCA1-206ENST00000531405 FAM208AQ9UK61 1670 aaKnown RBP26.1■■□□□ 1.77
SSSCA1-206ENST00000531405 ANKRD24Q8TF21 1146 aa26.1■■□□□ 1.77
SSSCA1-206ENST00000531405 ACSBG1Q96GR2 724 aa26.1■■□□□ 1.77
SSSCA1-206ENST00000531405 TERF2IPQ9NYB0 399 aa26.09■■□□□ 1.77
SSSCA1-206ENST00000531405 NINLQ9Y2I6 1382 aa26.08■■□□□ 1.77
SSSCA1-206ENST00000531405 ZBTB7AO95365 584 aa26.07■■□□□ 1.76
SSSCA1-206ENST00000531405 IL2RBP14784 551 aa26.07■■□□□ 1.76
SSSCA1-206ENST00000531405 STK32BQ9NY57 414 aa26.06■■□□□ 1.76
SSSCA1-206ENST00000531405 PAPPAQ13219 1627 aa26.05■■□□□ 1.76
SSSCA1-206ENST00000531405 SLC15A2Q16348 729 aa26.03■■□□□ 1.76
SSSCA1-206ENST00000531405 PUS7Q96PZ0 661 aaKnown RBP26.03■■□□□ 1.76
SSSCA1-206ENST00000531405 TESK2Q96S53 571 aa26.03■■□□□ 1.76
SSSCA1-206ENST00000531405 ST20-MTHFSA0A0A6YYL1 179 aa26.02■■□□□ 1.76
SSSCA1-206ENST00000531405 ATF5Q9Y2D1 282 aaPredicted RBP26.02■■□□□ 1.76
SSSCA1-206ENST00000531405 YY1P25490 414 aa26.01■■□□□ 1.75
SSSCA1-206ENST00000531405 LTV1Q96GA3 475 aaPredicted RBP26.01■■□□□ 1.75
SSSCA1-206ENST00000531405 SHANK3Q9BYB0 1731 aa26.01■■□□□ 1.75
SSSCA1-206ENST00000531405 PTGER2P43116 358 aa26■■□□□ 1.75
SSSCA1-206ENST00000531405 IP6K1Q92551 441 aa26■■□□□ 1.75
SSSCA1-206ENST00000531405 DOT1LQ8TEK3 1739 aa26■■□□□ 1.75
SSSCA1-206ENST00000531405 FBLN1P23142 703 aa25.98■■□□□ 1.75
SSSCA1-206ENST00000531405 UTRNP46939 3433 aa25.98■■□□□ 1.75
SSSCA1-206ENST00000531405 TUBGCP6Q96RT7 1819 aa25.96■■□□□ 1.75
SSSCA1-206ENST00000531405 DCAF8L1A6NGE4 600 aa25.96■■□□□ 1.75
SSSCA1-206ENST00000531405 MAP3K19Q56UN5 1328 aa25.95■■□□□ 1.75
SSSCA1-206ENST00000531405 COG3Q96JB2 828 aa25.95■■□□□ 1.74
SSSCA1-206ENST00000531405 KIF20BQ96Q89 1820 aa25.95■■□□□ 1.74
SSSCA1-206ENST00000531405 DDX54Q8TDD1 881 aaKnown RBP25.94■■□□□ 1.74
SSSCA1-206ENST00000531405 QSER1Q2KHR3 1735 aa25.94■■□□□ 1.74
SSSCA1-206ENST00000531405 HOXC9P31274 260 aa25.93■■□□□ 1.74
SSSCA1-206ENST00000531405 ZNF827Q17R98 1081 aa25.92■■□□□ 1.74
SSSCA1-206ENST00000531405 MTFR1LQ9H019 292 aa25.92■■□□□ 1.74
SSSCA1-206ENST00000531405 LRRC4BQ9NT99 713 aa25.92■■□□□ 1.74
SSSCA1-206ENST00000531405 AMPHP49418 695 aa25.91■■□□□ 1.74
SSSCA1-206ENST00000531405 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
SSSCA1-206ENST00000531405 LY75O60449 1722 aa25.91■■□□□ 1.74
SSSCA1-206ENST00000531405 FHDC1Q9C0D6 1143 aaPredicted RBP25.9■■□□□ 1.74
SSSCA1-206ENST00000531405 MEGF6O75095 1541 aa25.89■■□□□ 1.74
SSSCA1-206ENST00000531405 CHD4Q14839 1912 aa25.89■■□□□ 1.74
SSSCA1-206ENST00000531405 SGIP1Q9BQI5 828 aa25.89■■□□□ 1.74
SSSCA1-206ENST00000531405 USP47Q96K76 1375 aa25.86■■□□□ 1.73
SSSCA1-206ENST00000531405 RRS1Q15050 365 aaKnown RBP25.86■■□□□ 1.73
SSSCA1-206ENST00000531405 SYTL4Q96C24 671 aaPredicted RBP25.86■■□□□ 1.73
SSSCA1-206ENST00000531405 SYT17Q9BSW7 474 aa25.86■■□□□ 1.73
SSSCA1-206ENST00000531405 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms