RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
SOX6-214ENST00000531297 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
SOX6-214ENST00000531297 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
SOX6-214ENST00000531297 PTK2Q05397 1052 aa8.56□□□□□ -1.04
SOX6-214ENST00000531297 FKBPLQ9UIM3 349 aa8.56□□□□□ -1.04
SOX6-214ENST00000531297 SKIV2LQ15477 1246 aaKnown RBP8.55□□□□□ -1.04
SOX6-214ENST00000531297 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
SOX6-214ENST00000531297 ERFEQ4G0M1 354 aa8.55□□□□□ -1.04
SOX6-214ENST00000531297 GPSM3Q9Y4H4 160 aa8.55□□□□□ -1.04
SOX6-214ENST00000531297 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
SOX6-214ENST00000531297 TTLL8A6PVC2 850 aa8.54□□□□□ -1.04
SOX6-214ENST00000531297 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
SOX6-214ENST00000531297 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
SOX6-214ENST00000531297 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
SOX6-214ENST00000531297 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
SOX6-214ENST00000531297 CTDSPL2Q05D32 466 aa8.52□□□□□ -1.05
SOX6-214ENST00000531297 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
SOX6-214ENST00000531297 DNMT3LQ9UJW3 386 aa8.51□□□□□ -1.05
SOX6-214ENST00000531297 RNF225M0QZC1 329 aaPredicted RBP8.5□□□□□ -1.05
SOX6-214ENST00000531297 Q6ZVU0 165 aa8.5□□□□□ -1.05
SOX6-214ENST00000531297 SPINT1O43278 529 aa8.49□□□□□ -1.05
SOX6-214ENST00000531297 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
SOX6-214ENST00000531297 AP1G2O75843 785 aa8.47□□□□□ -1.05
SOX6-214ENST00000531297 PTSQ03393 145 aa8.47□□□□□ -1.05
SOX6-214ENST00000531297 LRRN4Q8WUT4 740 aa8.47□□□□□ -1.05
SOX6-214ENST00000531297 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
SOX6-214ENST00000531297 NR6A1Q15406 480 aa8.46□□□□□ -1.06
SOX6-214ENST00000531297 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
SOX6-214ENST00000531297 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.46□□□□□ -1.06
SOX6-214ENST00000531297 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.06
SOX6-214ENST00000531297 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
SOX6-214ENST00000531297 ZNF592Q92610 1267 aa8.45□□□□□ -1.06
SOX6-214ENST00000531297 FIGNL2A6NMB9 653 aa8.44□□□□□ -1.06
SOX6-214ENST00000531297 CBLBQ13191 982 aa8.44□□□□□ -1.06
SOX6-214ENST00000531297 INTS6LQ5JSJ4 861 aaKnown RBP8.44□□□□□ -1.06
SOX6-214ENST00000531297 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
SOX6-214ENST00000531297 ADAM32Q8TC27 787 aa8.44□□□□□ -1.06
SOX6-214ENST00000531297 NANOS1Q8WY41 292 aaKnown RBP8.44□□□□□ -1.06
SOX6-214ENST00000531297 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
SOX6-214ENST00000531297 SEPT12Q8IYM1 358 aa8.43□□□□□ -1.06
SOX6-214ENST00000531297 RELBQ01201 579 aa8.42□□□□□ -1.06
SOX6-214ENST00000531297 SV2AQ7L0J3 742 aa8.42□□□□□ -1.06
SOX6-214ENST00000531297 BCANQ96GW7 911 aa8.42□□□□□ -1.06
SOX6-214ENST00000531297 CNTNAP3BQ96NU0 1288 aa8.41□□□□□ -1.06
SOX6-214ENST00000531297 CNTNAP3Q9BZ76 1288 aa8.41□□□□□ -1.06
SOX6-214ENST00000531297 CDC14CA4D256 554 aa8.4□□□□□ -1.06
SOX6-214ENST00000531297 ADH1AP07327 375 aa8.4□□□□□ -1.06
SOX6-214ENST00000531297 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
SOX6-214ENST00000531297 ITGA6P23229 1130 aa8.4□□□□□ -1.06
SOX6-214ENST00000531297 KCNMA1Q12791 1236 aa8.4□□□□□ -1.06
SOX6-214ENST00000531297 SLC35F4A4IF30 521 aa8.39□□□□□ -1.07
SOX6-214ENST00000531297 TMEM259Q4ZIN3 620 aa8.39□□□□□ -1.07
SOX6-214ENST00000531297 SVOPQ8N4V2 548 aa8.39□□□□□ -1.07
SOX6-214ENST00000531297 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
SOX6-214ENST00000531297 PCMTD1Q96MG8 357 aaPredicted RBP8.39□□□□□ -1.07
SOX6-214ENST00000531297 INSM2Q96T92 566 aaPredicted RBP8.39□□□□□ -1.07
SOX6-214ENST00000531297 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
SOX6-214ENST00000531297 FAM117AQ9C073 453 aa8.39□□□□□ -1.07
SOX6-214ENST00000531297 RAB15P59190 212 aa8.38□□□□□ -1.07
SOX6-214ENST00000531297 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
SOX6-214ENST00000531297 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
SOX6-214ENST00000531297 CTSOP43234 321 aaPredicted RBP8.37□□□□□ -1.07
SOX6-214ENST00000531297 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
SOX6-214ENST00000531297 RNF20Q5VTR2 975 aa8.37□□□□□ -1.07
SOX6-214ENST00000531297 FOXR1Q6PIV2 292 aa8.37□□□□□ -1.07
SOX6-214ENST00000531297 ZNF784Q8NCA9 323 aaPredicted RBP8.37□□□□□ -1.07
SOX6-214ENST00000531297 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
SOX6-214ENST00000531297 ZNF330Q9Y3S2 320 aaPredicted RBP8.37□□□□□ -1.07
SOX6-214ENST00000531297 RFC5P40937 340 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 PTGIRP43119 386 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 LYSMD3Q7Z3D4 306 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
SOX6-214ENST00000531297 ESF1Q9H501 851 aaKnown RBP8.36□□□□□ -1.07
SOX6-214ENST00000531297 APBB1O00213 710 aa8.35□□□□□ -1.07
SOX6-214ENST00000531297 MAP3K10Q02779 954 aa8.35□□□□□ -1.07
SOX6-214ENST00000531297 VWA5B2Q8N398 1253 aa8.35□□□□□ -1.07
SOX6-214ENST00000531297 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
SOX6-214ENST00000531297 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
SOX6-214ENST00000531297 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
SOX6-214ENST00000531297 ENAMQ9NRM1 1142 aa8.34□□□□□ -1.07
SOX6-214ENST00000531297 ZBBXA8MT70 800 aa8.33□□□□□ -1.08
SOX6-214ENST00000531297 ESPNB1AK53 854 aa8.33□□□□□ -1.08
SOX6-214ENST00000531297 GPR161Q8N6U8 529 aaKnown RBP8.33□□□□□ -1.08
SOX6-214ENST00000531297 SCARF2Q96GP6 870 aaPredicted RBP8.33□□□□□ -1.08
SOX6-214ENST00000531297 TMPRSS4Q9NRS4 437 aa8.33□□□□□ -1.08
SOX6-214ENST00000531297 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
SOX6-214ENST00000531297 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 GDF11O95390 407 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 SLURP2P0DP57 97 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 GPC1P35052 558 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 KRT76Q01546 638 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 OCSTAMPQ9BR26 566 aa8.32□□□□□ -1.08
SOX6-214ENST00000531297 H7C1W4 665 aa8.31□□□□□ -1.08
SOX6-214ENST00000531297 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
SOX6-214ENST00000531297 HMX1Q9NP08 348 aaPredicted RBP8.31□□□□□ -1.08
SOX6-214ENST00000531297 PCDHB9Q9Y5E1 797 aa8.31□□□□□ -1.08
SOX6-214ENST00000531297 LILRA1O75019 489 aa8.3□□□□□ -1.08
SOX6-214ENST00000531297 RNF144AP50876 292 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms