RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 GGNBP2Q9H3C7 697 aa22.56■■□□□ 1.2
RELA-216ENST00000531238 MYOM1P52179 1685 aa22.55■■□□□ 1.2
RELA-216ENST00000531238 USP35Q9P2H5 1018 aa22.55■■□□□ 1.2
RELA-216ENST00000531238 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
RELA-216ENST00000531238 COL5A2P05997 1499 aaPredicted RBP22.54■■□□□ 1.2
RELA-216ENST00000531238 COG3Q96JB2 828 aa22.54■■□□□ 1.2
RELA-216ENST00000531238 PANK3Q9H999 370 aa22.51■■□□□ 1.19
RELA-216ENST00000531238 NSD3Q9BZ95 1437 aa22.5■■□□□ 1.19
RELA-216ENST00000531238 BRWD3Q6RI45 1802 aa22.5■■□□□ 1.19
RELA-216ENST00000531238 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
RELA-216ENST00000531238 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
RELA-216ENST00000531238 TCP11L2Q8N4U5 519 aa22.49■■□□□ 1.19
RELA-216ENST00000531238 A0A0G2JS52 829 aa22.48■■□□□ 1.19
RELA-216ENST00000531238 MYT1Q01538 1121 aa22.48■■□□□ 1.19
RELA-216ENST00000531238 KIF7Q2M1P5 1343 aa22.48■■□□□ 1.19
RELA-216ENST00000531238 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
RELA-216ENST00000531238 FAM182BQ5T319 152 aa22.47■■□□□ 1.19
RELA-216ENST00000531238 TOM1L2Q6ZVM7 507 aa22.47■■□□□ 1.19
RELA-216ENST00000531238 MAP3K19Q56UN5 1328 aa22.47■■□□□ 1.19
RELA-216ENST00000531238 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
RELA-216ENST00000531238 CRB1P82279 1406 aa22.47■■□□□ 1.19
RELA-216ENST00000531238 IP6K1Q92551 441 aa22.46■■□□□ 1.19
RELA-216ENST00000531238 THRAP3Q9Y2W1 955 aaKnown RBP22.46■■□□□ 1.19
RELA-216ENST00000531238 RRS1Q15050 365 aaKnown RBP22.45■■□□□ 1.18
RELA-216ENST00000531238 THSD7AQ9UPZ6 1657 aa22.45■■□□□ 1.18
RELA-216ENST00000531238 CSB-PGBD3P0DP91 1061 aa22.43■■□□□ 1.18
RELA-216ENST00000531238 ANKRD24Q8TF21 1146 aa22.43■■□□□ 1.18
RELA-216ENST00000531238 CARD10Q9BWT7 1032 aa22.43■■□□□ 1.18
RELA-216ENST00000531238 HOXC9P31274 260 aa22.42■■□□□ 1.18
RELA-216ENST00000531238 ERBB3P21860 1342 aa22.41■■□□□ 1.18
RELA-216ENST00000531238 LTN1O94822 1766 aa22.4■■□□□ 1.18
RELA-216ENST00000531238 CGNL1Q0VF96 1302 aa22.4■■□□□ 1.18
RELA-216ENST00000531238 ABCC6O95255 1503 aa22.4■■□□□ 1.18
RELA-216ENST00000531238 WASHC2AQ641Q2 1341 aa22.39■■□□□ 1.18
RELA-216ENST00000531238 AMPHP49418 695 aa22.39■■□□□ 1.17
RELA-216ENST00000531238 LTV1Q96GA3 475 aaPredicted RBP22.39■■□□□ 1.17
RELA-216ENST00000531238 NLRP2Q9NX02 1062 aa22.37■■□□□ 1.17
RELA-216ENST00000531238 KIF20BQ96Q89 1820 aa22.36■■□□□ 1.17
RELA-216ENST00000531238 HSP90AB2PQ58FF8 381 aa22.36■■□□□ 1.17
RELA-216ENST00000531238 EMILIN1Q9Y6C2 1016 aa22.36■■□□□ 1.17
RELA-216ENST00000531238 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
RELA-216ENST00000531238 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
RELA-216ENST00000531238 PER1O15534 1290 aaPredicted RBP22.35■■□□□ 1.17
RELA-216ENST00000531238 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
RELA-216ENST00000531238 CCDC125Q86Z20 511 aa22.35■■□□□ 1.17
RELA-216ENST00000531238 DISP2A7MBM2 1401 aa22.34■■□□□ 1.17
RELA-216ENST00000531238 TNNT2P45379 298 aaPredicted RBP22.32■■□□□ 1.16
RELA-216ENST00000531238 DDB1Q16531 1140 aa22.32■■□□□ 1.16
RELA-216ENST00000531238 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
RELA-216ENST00000531238 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
RELA-216ENST00000531238 DEFB132Q7Z7B7 95 aa22.31■■□□□ 1.16
RELA-216ENST00000531238 PEAK1Q9H792 1746 aa22.31■■□□□ 1.16
RELA-216ENST00000531238 NBPF6Q5VWK0 638 aa22.3■■□□□ 1.16
RELA-216ENST00000531238 FAM196AQ6ZSG2 479 aa22.3■■□□□ 1.16
RELA-216ENST00000531238 MARCH10Q8NA82 808 aaPredicted RBP22.3■■□□□ 1.16
RELA-216ENST00000531238 NBPF4Q96M43 638 aa22.3■■□□□ 1.16
RELA-216ENST00000531238 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
RELA-216ENST00000531238 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
RELA-216ENST00000531238 PARP4Q9UKK3 1724 aaKnown RBP22.29■■□□□ 1.16
RELA-216ENST00000531238 RTL1A6NKG5 1358 aa22.29■■□□□ 1.16
RELA-216ENST00000531238 INSRP06213 1382 aa22.28■■□□□ 1.16
RELA-216ENST00000531238 EXOC5O00471 708 aa22.28■■□□□ 1.16
RELA-216ENST00000531238 PPM1GO15355 546 aaPredicted RBP22.28■■□□□ 1.16
RELA-216ENST00000531238 TRIM37O94972 964 aa22.27■■□□□ 1.16
RELA-216ENST00000531238 IL2RBP14784 551 aa22.27■■□□□ 1.16
RELA-216ENST00000531238 FLT4P35916 1363 aa22.26■■□□□ 1.15
RELA-216ENST00000531238 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
RELA-216ENST00000531238 KIF24Q5T7B8 1368 aa22.25■■□□□ 1.15
RELA-216ENST00000531238 LRRC37A3O60309 1634 aa22.25■■□□□ 1.15
RELA-216ENST00000531238 USHBP1Q8N6Y0 703 aa22.25■■□□□ 1.15
RELA-216ENST00000531238 PTF1AQ7RTS3 328 aa22.24■■□□□ 1.15
RELA-216ENST00000531238 NSD2O96028 1365 aa22.24■■□□□ 1.15
RELA-216ENST00000531238 RGPD2P0DJD1 1756 aa22.23■■□□□ 1.15
RELA-216ENST00000531238 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
RELA-216ENST00000531238 MAP2P11137 1827 aaKnown RBP22.22■■□□□ 1.15
RELA-216ENST00000531238 SF3B2Q13435 895 aaKnown RBP22.22■■□□□ 1.15
RELA-216ENST00000531238 ANKRD26Q9UPS8 1709 aa22.21■■□□□ 1.15
RELA-216ENST00000531238 EN1Q05925 392 aaPredicted RBP22.21■■□□□ 1.15
RELA-216ENST00000531238 CC2D1BQ5T0F9 858 aaKnown RBP22.2■■□□□ 1.14
RELA-216ENST00000531238 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
RELA-216ENST00000531238 OVOS2A0A0G2JMS6 1433 aa22.18■■□□□ 1.14
RELA-216ENST00000531238 TNS2Q63HR2 1409 aa22.18■■□□□ 1.14
RELA-216ENST00000531238 APBA3O96018 575 aa22.18■■□□□ 1.14
RELA-216ENST00000531238 EIF4A2Q14240 407 aaKnown RBP22.18■■□□□ 1.14
RELA-216ENST00000531238 EYA1Q99502 592 aa22.18■■□□□ 1.14
RELA-216ENST00000531238 BAG6P46379 1132 aa22.17■■□□□ 1.14
RELA-216ENST00000531238 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
RELA-216ENST00000531238 MEGF6O75095 1541 aa22.16■■□□□ 1.14
RELA-216ENST00000531238 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
RELA-216ENST00000531238 CAMKK2Q96RR4 588 aa22.16■■□□□ 1.14
RELA-216ENST00000531238 BCL9O00512 1426 aa22.15■■□□□ 1.14
RELA-216ENST00000531238 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
RELA-216ENST00000531238 KCNQ2O43526 872 aa22.15■■□□□ 1.14
RELA-216ENST00000531238 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
RELA-216ENST00000531238 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
RELA-216ENST00000531238 TNS1Q9HBL0 1735 aaKnown RBP22.14■■□□□ 1.13
RELA-216ENST00000531238 ACSBG1Q96GR2 724 aa22.13■■□□□ 1.13
RELA-216ENST00000531238 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
RELA-216ENST00000531238 RGPD1P0DJD0 1748 aa22.13■■□□□ 1.13
RELA-216ENST00000531238 NPC1L1Q9UHC9 1359 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms