RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 EVA1CP58658 441 aa20.87■□□□□ 0.93
CCS-206ENST00000530961 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
CCS-206ENST00000530961 VPS72Q15906 364 aa20.86■□□□□ 0.93
CCS-206ENST00000530961 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
CCS-206ENST00000530961 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
CCS-206ENST00000530961 R3HDM1Q15032 1099 aaKnown RBP20.84■□□□□ 0.93
CCS-206ENST00000530961 IP6K1Q92551 441 aa20.84■□□□□ 0.93
CCS-206ENST00000530961 MAP3K19Q56UN5 1328 aa20.83■□□□□ 0.93
CCS-206ENST00000530961 FBLN1P23142 703 aa20.83■□□□□ 0.93
CCS-206ENST00000530961 AMPHP49418 695 aa20.83■□□□□ 0.93
CCS-206ENST00000530961 AXIN2Q9Y2T1 843 aa20.83■□□□□ 0.93
CCS-206ENST00000530961 NFAT5O94916 1531 aa20.83■□□□□ 0.92
CCS-206ENST00000530961 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
CCS-206ENST00000530961 CC2D1BQ5T0F9 858 aaKnown RBP20.82■□□□□ 0.92
CCS-206ENST00000530961 STRN4Q9NRL3 753 aa20.82■□□□□ 0.92
CCS-206ENST00000530961 CCDC9Q9Y3X0 531 aaKnown RBP20.81■□□□□ 0.92
CCS-206ENST00000530961 KIF24Q5T7B8 1368 aa20.81■□□□□ 0.92
CCS-206ENST00000530961 PHRF1Q9P1Y6 1649 aaKnown RBP20.8■□□□□ 0.92
CCS-206ENST00000530961 TNNT2P45379 298 aaPredicted RBP20.8■□□□□ 0.92
CCS-206ENST00000530961 CRYBG1Q9Y4K1 1723 aa20.79■□□□□ 0.92
CCS-206ENST00000530961 HOXC9P31274 260 aa20.79■□□□□ 0.92
CCS-206ENST00000530961 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
CCS-206ENST00000530961 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
CCS-206ENST00000530961 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
CCS-206ENST00000530961 ABCA3Q99758 1704 aa20.78■□□□□ 0.92
CCS-206ENST00000530961 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
CCS-206ENST00000530961 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
CCS-206ENST00000530961 COL14A1Q05707 1796 aaKnown RBP20.77■□□□□ 0.92
CCS-206ENST00000530961 CSB-PGBD3P0DP91 1061 aa20.77■□□□□ 0.92
CCS-206ENST00000530961 LARP1Q6PKG0 1096 aaKnown RBP20.77■□□□□ 0.92
CCS-206ENST00000530961 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
CCS-206ENST00000530961 WDR17Q8IZU2 1322 aa20.77■□□□□ 0.91
CCS-206ENST00000530961 CAMTA1Q9Y6Y1 1673 aa20.77■□□□□ 0.91
CCS-206ENST00000530961 C1QTNF8P60827 252 aa20.76■□□□□ 0.91
CCS-206ENST00000530961 ZNF784Q8NCA9 323 aaPredicted RBP20.76■□□□□ 0.91
CCS-206ENST00000530961 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
CCS-206ENST00000530961 ABCC6O95255 1503 aa20.76■□□□□ 0.91
CCS-206ENST00000530961 COL5A2P05997 1499 aaPredicted RBP20.75■□□□□ 0.91
CCS-206ENST00000530961 PPM1GO15355 546 aaPredicted RBP20.75■□□□□ 0.91
CCS-206ENST00000530961 TOM1L2Q6ZVM7 507 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 KRT27Q7Z3Y8 459 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 ANKRD24Q8TF21 1146 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 GLI3P10071 1580 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 ERBB3P21860 1342 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 SPATA31A1Q5TZJ5 1347 aa20.75■□□□□ 0.91
CCS-206ENST00000530961 FLT4P35916 1363 aa20.74■□□□□ 0.91
CCS-206ENST00000530961 THRAP3Q9Y2W1 955 aaKnown RBP20.74■□□□□ 0.91
CCS-206ENST00000530961 ONECUT3O60422 494 aaPredicted RBP20.73■□□□□ 0.91
CCS-206ENST00000530961 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
CCS-206ENST00000530961 TCP11L2Q8N4U5 519 aa20.73■□□□□ 0.91
CCS-206ENST00000530961 CARD10Q9BWT7 1032 aa20.73■□□□□ 0.91
CCS-206ENST00000530961 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
CCS-206ENST00000530961 INSRP06213 1382 aa20.72■□□□□ 0.91
CCS-206ENST00000530961 BRWD3Q6RI45 1802 aa20.72■□□□□ 0.91
CCS-206ENST00000530961 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
CCS-206ENST00000530961 MARF1Q9Y4F3 1742 aaKnown RBP20.72■□□□□ 0.91
CCS-206ENST00000530961 CRB1P82279 1406 aa20.71■□□□□ 0.91
CCS-206ENST00000530961 EN1Q05925 392 aaPredicted RBP20.71■□□□□ 0.91
CCS-206ENST00000530961 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
CCS-206ENST00000530961 USP35Q9P2H5 1018 aa20.71■□□□□ 0.91
CCS-206ENST00000530961 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
CCS-206ENST00000530961 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
CCS-206ENST00000530961 PPP1R1BQ9UD71 204 aaPredicted RBP20.7■□□□□ 0.9
CCS-206ENST00000530961 LMO7Q8WWI1 1683 aa20.7■□□□□ 0.9
CCS-206ENST00000530961 MTHFSP49914 203 aa20.69■□□□□ 0.9
CCS-206ENST00000530961 FAM98CQ17RN3 349 aaKnown RBP20.69■□□□□ 0.9
CCS-206ENST00000530961 NWD2Q9ULI1 1742 aa20.68■□□□□ 0.9
CCS-206ENST00000530961 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
CCS-206ENST00000530961 RALBP1Q15311 655 aa20.67■□□□□ 0.9
CCS-206ENST00000530961 CDCA7Q9BWT1 371 aaPredicted RBP20.67■□□□□ 0.9
CCS-206ENST00000530961 KIF20BQ96Q89 1820 aa20.65■□□□□ 0.9
CCS-206ENST00000530961 PLCH1Q4KWH8 1693 aa20.65■□□□□ 0.9
CCS-206ENST00000530961 A0A0G2JS52 829 aa20.64■□□□□ 0.89
CCS-206ENST00000530961 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
CCS-206ENST00000530961 MYT1Q01538 1121 aa20.64■□□□□ 0.89
CCS-206ENST00000530961 COL18A1P39060 1754 aa20.64■□□□□ 0.89
CCS-206ENST00000530961 PARD3Q8TEW0 1356 aa20.63■□□□□ 0.89
CCS-206ENST00000530961 EIF4A2Q14240 407 aaKnown RBP20.63■□□□□ 0.89
CCS-206ENST00000530961 NBPF6Q5VWK0 638 aa20.63■□□□□ 0.89
CCS-206ENST00000530961 NBPF4Q96M43 638 aa20.63■□□□□ 0.89
CCS-206ENST00000530961 NRAPQ86VF7 1730 aa20.62■□□□□ 0.89
CCS-206ENST00000530961 DISP2A7MBM2 1401 aa20.61■□□□□ 0.89
CCS-206ENST00000530961 IL2RBP14784 551 aa20.6■□□□□ 0.89
CCS-206ENST00000530961 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
CCS-206ENST00000530961 EYA1Q99502 592 aa20.59■□□□□ 0.89
CCS-206ENST00000530961 SPON1Q9HCB6 807 aa20.59■□□□□ 0.89
CCS-206ENST00000530961 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
CCS-206ENST00000530961 DIAPH1O60610 1272 aaKnown RBP20.58■□□□□ 0.89
CCS-206ENST00000530961 IL13P35225 146 aa20.58■□□□□ 0.89
CCS-206ENST00000530961 DDB1Q16531 1140 aa20.57■□□□□ 0.88
CCS-206ENST00000530961 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
CCS-206ENST00000530961 EXOC5O00471 708 aa20.56■□□□□ 0.88
CCS-206ENST00000530961 PDE3BQ13370 1112 aa20.56■□□□□ 0.88
CCS-206ENST00000530961 EZH2Q15910 746 aaKnown RBP20.56■□□□□ 0.88
CCS-206ENST00000530961 RAPGEF4Q8WZA2 1011 aa20.56■□□□□ 0.88
CCS-206ENST00000530961 ANKRD26Q9UPS8 1709 aa20.56■□□□□ 0.88
CCS-206ENST00000530961 USHBP1Q8N6Y0 703 aa20.55■□□□□ 0.88
CCS-206ENST00000530961 IGSF1Q8N6C5 1336 aa20.54■□□□□ 0.88
CCS-206ENST00000530961 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
CCS-206ENST00000530961 PEAK1Q9H792 1746 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms