RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 AATKQ6ZMQ8 1374 aa26.05■■□□□ 1.76
GMDS-208ENST00000530927 SPATA31A1Q5TZJ5 1347 aa26.04■■□□□ 1.76
GMDS-208ENST00000530927 FBLN1P23142 703 aa26.04■■□□□ 1.76
GMDS-208ENST00000530927 UPF1Q92900 1129 aaKnown RBP eCLIP26.04■■□□□ 1.763e-10■■■■■ 36
GMDS-208ENST00000530927 LTN1O94822 1766 aa26.02■■□□□ 1.76
GMDS-208ENST00000530927 A0A0G2JS52 829 aa26.02■■□□□ 1.76
GMDS-208ENST00000530927 ONECUT3O60422 494 aaPredicted RBP26.02■■□□□ 1.76
GMDS-208ENST00000530927 MYT1Q01538 1121 aa26.02■■□□□ 1.76
GMDS-208ENST00000530927 GGNBP2Q9H3C7 697 aa26.02■■□□□ 1.76
GMDS-208ENST00000530927 NSD3Q9BZ95 1437 aa26.02■■□□□ 1.76
GMDS-208ENST00000530927 FYB1O15117 783 aa26■■□□□ 1.75
GMDS-208ENST00000530927 KIF20BQ96Q89 1820 aa26■■□□□ 1.75
GMDS-208ENST00000530927 THSD7AQ9UPZ6 1657 aa26■■□□□ 1.75
GMDS-208ENST00000530927 COG3Q96JB2 828 aa25.98■■□□□ 1.75
GMDS-208ENST00000530927 FAM182BQ5T319 152 aa25.95■■□□□ 1.74
GMDS-208ENST00000530927 CRB1P82279 1406 aa25.95■■□□□ 1.74
GMDS-208ENST00000530927 KIF7Q2M1P5 1343 aa25.93■■□□□ 1.74
GMDS-208ENST00000530927 TOM1L2Q6ZVM7 507 aa25.92■■□□□ 1.74
GMDS-208ENST00000530927 KRT27Q7Z3Y8 459 aa25.92■■□□□ 1.74
GMDS-208ENST00000530927 TCP11L2Q8N4U5 519 aa25.92■■□□□ 1.74
GMDS-208ENST00000530927 PANK3Q9H999 370 aa25.92■■□□□ 1.74
GMDS-208ENST00000530927 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
GMDS-208ENST00000530927 MAP3K19Q56UN5 1328 aa25.91■■□□□ 1.74
GMDS-208ENST00000530927 ABCC6O95255 1503 aa25.91■■□□□ 1.74
GMDS-208ENST00000530927 RRS1Q15050 365 aaKnown RBP25.9■■□□□ 1.74
GMDS-208ENST00000530927 CSB-PGBD3P0DP91 1061 aa25.89■■□□□ 1.74
GMDS-208ENST00000530927 BARGINQ6ZT62 677 aa25.88■■□□□ 1.73
GMDS-208ENST00000530927 ERBB3P21860 1342 aa25.86■■□□□ 1.73
GMDS-208ENST00000530927 WNK3Q9BYP7 1800 aa25.85■■□□□ 1.73
GMDS-208ENST00000530927 ANKRD24Q8TF21 1146 aa25.85■■□□□ 1.73
GMDS-208ENST00000530927 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
GMDS-208ENST00000530927 PEAK1Q9H792 1746 aa25.84■■□□□ 1.73
GMDS-208ENST00000530927 IP6K1Q92551 441 aa25.84■■□□□ 1.73
GMDS-208ENST00000530927 PARP4Q9UKK3 1724 aaKnown RBP25.83■■□□□ 1.73
GMDS-208ENST00000530927 HOXC9P31274 260 aa25.83■■□□□ 1.73
GMDS-208ENST00000530927 THRAP3Q9Y2W1 955 aaKnown RBP25.83■■□□□ 1.73
GMDS-208ENST00000530927 CGNL1Q0VF96 1302 aa25.83■■□□□ 1.73
GMDS-208ENST00000530927 AMPHP49418 695 aa25.82■■□□□ 1.72
GMDS-208ENST00000530927 CARD10Q9BWT7 1032 aa25.82■■□□□ 1.72
GMDS-208ENST00000530927 LRRC37A3O60309 1634 aa25.82■■□□□ 1.72
GMDS-208ENST00000530927 WASHC2AQ641Q2 1341 aa25.81■■□□□ 1.72
GMDS-208ENST00000530927 BLMP54132 1417 aaPredicted RBP25.81■■□□□ 1.72
GMDS-208ENST00000530927 NLRP2Q9NX02 1062 aa25.8■■□□□ 1.72
GMDS-208ENST00000530927 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
GMDS-208ENST00000530927 ANKRD26Q9UPS8 1709 aa25.8■■□□□ 1.72
GMDS-208ENST00000530927 EMILIN1Q9Y6C2 1016 aa25.8■■□□□ 1.72
GMDS-208ENST00000530927 RGPD2P0DJD1 1756 aa25.79■■□□□ 1.72
GMDS-208ENST00000530927 TNNT2P45379 298 aaPredicted RBP25.79■■□□□ 1.72
GMDS-208ENST00000530927 DISP2A7MBM2 1401 aa25.79■■□□□ 1.72
GMDS-208ENST00000530927 PDE3BQ13370 1112 aa25.76■■□□□ 1.71
GMDS-208ENST00000530927 HSP90AB2PQ58FF8 381 aa25.76■■□□□ 1.71
GMDS-208ENST00000530927 RTL1A6NKG5 1358 aa25.75■■□□□ 1.71
GMDS-208ENST00000530927 PPM1GO15355 546 aaPredicted RBP25.73■■□□□ 1.71
GMDS-208ENST00000530927 DEFB132Q7Z7B7 95 aa25.73■■□□□ 1.71
GMDS-208ENST00000530927 MAP2P11137 1827 aaKnown RBP25.73■■□□□ 1.71
GMDS-208ENST00000530927 DDB1Q16531 1140 aa25.72■■□□□ 1.71
GMDS-208ENST00000530927 FAM208AQ9UK61 1670 aaKnown RBP25.72■■□□□ 1.71
GMDS-208ENST00000530927 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
GMDS-208ENST00000530927 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
GMDS-208ENST00000530927 FLT4P35916 1363 aa25.7■■□□□ 1.71
GMDS-208ENST00000530927 TNS1Q9HBL0 1735 aaKnown RBP25.7■■□□□ 1.7
GMDS-208ENST00000530927 POLKQ9UBT6 870 aa25.7■■□□□ 1.7
GMDS-208ENST00000530927 TRIM37O94972 964 aa25.69■■□□□ 1.7
GMDS-208ENST00000530927 AMER1Q5JTC6 1135 aaPredicted RBP25.69■■□□□ 1.7
GMDS-208ENST00000530927 NBPF6Q5VWK0 638 aa25.69■■□□□ 1.7
GMDS-208ENST00000530927 MARCH10Q8NA82 808 aaPredicted RBP25.69■■□□□ 1.7
GMDS-208ENST00000530927 NBPF4Q96M43 638 aa25.69■■□□□ 1.7
GMDS-208ENST00000530927 INSRP06213 1382 aa25.69■■□□□ 1.7
GMDS-208ENST00000530927 PER1O15534 1290 aaPredicted RBP25.68■■□□□ 1.7
GMDS-208ENST00000530927 FAM196AQ6ZSG2 479 aa25.68■■□□□ 1.7
GMDS-208ENST00000530927 CCDC125Q86Z20 511 aa25.68■■□□□ 1.7
GMDS-208ENST00000530927 RGPD1P0DJD0 1748 aa25.67■■□□□ 1.7
GMDS-208ENST00000530927 IL2RBP14784 551 aa25.67■■□□□ 1.7
GMDS-208ENST00000530927 NSD2O96028 1365 aa25.66■■□□□ 1.7
GMDS-208ENST00000530927 CNGB1Q14028 1251 aaPredicted RBP25.66■■□□□ 1.7
GMDS-208ENST00000530927 CDCA7Q9BWT1 371 aaPredicted RBP25.66■■□□□ 1.7
GMDS-208ENST00000530927 TNS2Q63HR2 1409 aa25.66■■□□□ 1.7
GMDS-208ENST00000530927 MORC1Q86VD1 984 aa25.65■■□□□ 1.7
GMDS-208ENST00000530927 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.7
GMDS-208ENST00000530927 SF3B2Q13435 895 aaKnown RBP25.64■■□□□ 1.7
GMDS-208ENST00000530927 OVOS2A0A0G2JMS6 1433 aa25.64■■□□□ 1.7
GMDS-208ENST00000530927 MEGF6O75095 1541 aa25.64■■□□□ 1.69
GMDS-208ENST00000530927 EXOC5O00471 708 aa25.63■■□□□ 1.69
GMDS-208ENST00000530927 PTF1AQ7RTS3 328 aa25.63■■□□□ 1.69
GMDS-208ENST00000530927 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
GMDS-208ENST00000530927 CC2D1BQ5T0F9 858 aaKnown RBP25.63■■□□□ 1.69
GMDS-208ENST00000530927 SBF2Q86WG5 1849 aa25.61■■□□□ 1.69
GMDS-208ENST00000530927 ZEB1P37275 1124 aaPredicted RBP25.61■■□□□ 1.69
GMDS-208ENST00000530927 EN1Q05925 392 aaPredicted RBP25.61■■□□□ 1.69
GMDS-208ENST00000530927 SHANK3Q9BYB0 1731 aa25.58■■□□□ 1.69
GMDS-208ENST00000530927 APBA3O96018 575 aa25.56■■□□□ 1.68
GMDS-208ENST00000530927 BAG6P46379 1132 aa25.56■■□□□ 1.68
GMDS-208ENST00000530927 EIF4A2Q14240 407 aaKnown RBP25.56■■□□□ 1.68
GMDS-208ENST00000530927 DDX54Q8TDD1 881 aaKnown RBP25.55■■□□□ 1.68
GMDS-208ENST00000530927 EZH2Q15910 746 aaKnown RBP25.54■■□□□ 1.68
GMDS-208ENST00000530927 EYA1Q99502 592 aa25.54■■□□□ 1.68
GMDS-208ENST00000530927 ACSBG1Q96GR2 724 aa25.54■■□□□ 1.68
GMDS-208ENST00000530927 KCNQ2O43526 872 aa25.53■■□□□ 1.68
GMDS-208ENST00000530927 BCL9O00512 1426 aa25.51■■□□□ 1.67
GMDS-208ENST00000530927 NCAPD2Q15021 1401 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms