RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 UTRNP46939 3433 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 PTGER2P43116 358 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
USP35-205ENST00000530521 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
USP35-205ENST00000530521 MYOM1P52179 1685 aa12.53□□□□□ -0.4
USP35-205ENST00000530521 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
USP35-205ENST00000530521 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
USP35-205ENST00000530521 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.41
USP35-205ENST00000530521 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.41
USP35-205ENST00000530521 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.41
USP35-205ENST00000530521 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
USP35-205ENST00000530521 CSB-PGBD3P0DP91 1061 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 STK32BQ9NY57 414 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 QRICH2Q9H0J4 1663 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
USP35-205ENST00000530521 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
USP35-205ENST00000530521 EXOC5O00471 708 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 USP6P35125 1406 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 CHD4Q14839 1912 aa12.5□□□□□ -0.41
USP35-205ENST00000530521 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
USP35-205ENST00000530521 SLIT3O75094 1523 aa12.48□□□□□ -0.41
USP35-205ENST00000530521 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
USP35-205ENST00000530521 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
USP35-205ENST00000530521 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
USP35-205ENST00000530521 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
USP35-205ENST00000530521 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
USP35-205ENST00000530521 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
USP35-205ENST00000530521 CDCA7Q9BWT1 371 aaPredicted RBP12.45□□□□□ -0.42
USP35-205ENST00000530521 MTFR1LQ9H019 292 aa12.45□□□□□ -0.42
USP35-205ENST00000530521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP35-205ENST00000530521 KCNH5Q8NCM2 988 aa12.44□□□□□ -0.42
USP35-205ENST00000530521 ARXQ96QS3 562 aa12.44□□□□□ -0.42
USP35-205ENST00000530521 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
USP35-205ENST00000530521 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 KCNQ4P56696 695 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 L3MBTL2Q969R5 705 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
USP35-205ENST00000530521 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
USP35-205ENST00000530521 BTAF1O14981 1849 aa12.42□□□□□ -0.42
USP35-205ENST00000530521 C1QTNF8P60827 252 aa12.42□□□□□ -0.42
USP35-205ENST00000530521 SIN3AQ96ST3 1273 aa12.42□□□□□ -0.42
USP35-205ENST00000530521 BCL9O00512 1426 aa12.42□□□□□ -0.42
USP35-205ENST00000530521 GPR162Q16538 588 aa12.41□□□□□ -0.42
USP35-205ENST00000530521 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
USP35-205ENST00000530521 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
USP35-205ENST00000530521 NME9Q86XW9 330 aa12.4□□□□□ -0.42
USP35-205ENST00000530521 NHSQ6T4R5 1651 aa12.4□□□□□ -0.42
USP35-205ENST00000530521 LTN1O94822 1766 aa12.4□□□□□ -0.42
USP35-205ENST00000530521 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
USP35-205ENST00000530521 NFAT5O94916 1531 aa12.39□□□□□ -0.43
USP35-205ENST00000530521 NEUROD1Q13562 356 aa12.39□□□□□ -0.43
USP35-205ENST00000530521 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
USP35-205ENST00000530521 GOLGB1Q14789 3259 aaKnown RBP12.39□□□□□ -0.43
USP35-205ENST00000530521 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
USP35-205ENST00000530521 TRPM1Q7Z4N2 1603 aa12.38□□□□□ -0.43
USP35-205ENST00000530521 IL2RBP14784 551 aa12.38□□□□□ -0.43
USP35-205ENST00000530521 ANKRD24Q8TF21 1146 aa12.38□□□□□ -0.43
USP35-205ENST00000530521 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
USP35-205ENST00000530521 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
USP35-205ENST00000530521 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
USP35-205ENST00000530521 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
USP35-205ENST00000530521 FBLN1P23142 703 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 TUBGCP6Q96RT7 1819 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 ERBB3P21860 1342 aa12.36□□□□□ -0.43
USP35-205ENST00000530521 SYTL4Q96C24 671 aaPredicted RBP12.35□□□□□ -0.43
USP35-205ENST00000530521 RGPD2P0DJD1 1756 aa12.35□□□□□ -0.43
USP35-205ENST00000530521 PNPLA7Q6ZV29 1317 aa12.35□□□□□ -0.43
USP35-205ENST00000530521 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
USP35-205ENST00000530521 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
USP35-205ENST00000530521 TFCP2L1Q9NZI6 479 aa12.34□□□□□ -0.43
USP35-205ENST00000530521 ROCK2O75116 1388 aaKnown RBP12.33□□□□□ -0.44
USP35-205ENST00000530521 ABCC6O95255 1503 aa12.32□□□□□ -0.44
USP35-205ENST00000530521 MSH5O43196 834 aa12.32□□□□□ -0.44
USP35-205ENST00000530521 GIGYF1O75420 1035 aaPredicted RBP12.32□□□□□ -0.44
USP35-205ENST00000530521 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
USP35-205ENST00000530521 POLD1P28340 1107 aa12.32□□□□□ -0.44
USP35-205ENST00000530521 CD163L1Q9NR16 1453 aa12.32□□□□□ -0.44
USP35-205ENST00000530521 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
USP35-205ENST00000530521 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
USP35-205ENST00000530521 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
USP35-205ENST00000530521 CEP350Q5VT06 3117 aa12.3□□□□□ -0.44
USP35-205ENST00000530521 MSL1Q68DK7 614 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms