RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
NUP98-218ENST00000530516 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.19□□□□□ -1.26
NUP98-218ENST00000530516 SLC10A4Q96EP9 437 aa7.19□□□□□ -1.26
NUP98-218ENST00000530516 KDM4CQ9H3R0 1056 aa7.19□□□□□ -1.26
NUP98-218ENST00000530516 GPSM3Q9Y4H4 160 aa7.19□□□□□ -1.26
NUP98-218ENST00000530516 PPFIA3O75145 1194 aa7.18□□□□□ -1.26
NUP98-218ENST00000530516 ERFEQ4G0M1 354 aa7.18□□□□□ -1.26
NUP98-218ENST00000530516 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
NUP98-218ENST00000530516 ARHGAP9Q9BRR9 750 aa7.18□□□□□ -1.26
NUP98-218ENST00000530516 FKBPLQ9UIM3 349 aa7.18□□□□□ -1.26
NUP98-218ENST00000530516 SOBPA7XYQ1 873 aa7.17□□□□□ -1.26
NUP98-218ENST00000530516 SKIV2LQ15477 1246 aaKnown RBP7.17□□□□□ -1.26
NUP98-218ENST00000530516 TTLL8A6PVC2 850 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 PTK2Q05397 1052 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 SH3D19Q5HYK7 790 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 Q6ZVU0 165 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 FAM117AQ9C073 453 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 POLR3EQ9NVU0 708 aa7.16□□□□□ -1.26
NUP98-218ENST00000530516 BRPF1P55201 1214 aaPredicted RBP7.15□□□□□ -1.26
NUP98-218ENST00000530516 PPP1R26Q5T8A7 1209 aaPredicted RBP7.15□□□□□ -1.26
NUP98-218ENST00000530516 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
NUP98-218ENST00000530516 ZBTB33Q86T24 672 aa7.15□□□□□ -1.26
NUP98-218ENST00000530516 KCTD15Q96SI1 283 aaPredicted RBP7.15□□□□□ -1.26
NUP98-218ENST00000530516 DNMT3LQ9UJW3 386 aa7.15□□□□□ -1.26
NUP98-218ENST00000530516 SPINT1O43278 529 aa7.14□□□□□ -1.27
NUP98-218ENST00000530516 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
NUP98-218ENST00000530516 NBPF20Q3BBV1 942 aa7.14□□□□□ -1.27
NUP98-218ENST00000530516 NANOS1Q8WY41 292 aaKnown RBP7.12□□□□□ -1.27
NUP98-218ENST00000530516 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.12□□□□□ -1.27
NUP98-218ENST00000530516 RNF225M0QZC1 329 aaPredicted RBP7.11□□□□□ -1.27
NUP98-218ENST00000530516 PTSQ03393 145 aa7.11□□□□□ -1.27
NUP98-218ENST00000530516 NEUROD2Q15784 382 aa7.11□□□□□ -1.27
NUP98-218ENST00000530516 CCDC125Q86Z20 511 aa7.1□□□□□ -1.27
NUP98-218ENST00000530516 LRRN4Q8WUT4 740 aa7.1□□□□□ -1.27
NUP98-218ENST00000530516 KCNMA1Q12791 1236 aa7.09□□□□□ -1.27
NUP98-218ENST00000530516 INTS6LQ5JSJ4 861 aaKnown RBP7.09□□□□□ -1.27
NUP98-218ENST00000530516 FBXO31Q5XUX0 539 aaPredicted RBP7.09□□□□□ -1.27
NUP98-218ENST00000530516 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
NUP98-218ENST00000530516 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 CBLBQ13191 982 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 NR6A1Q15406 480 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 CCDC155Q8N6L0 562 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
NUP98-218ENST00000530516 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
NUP98-218ENST00000530516 AP1G2O75843 785 aa7.07□□□□□ -1.28
NUP98-218ENST00000530516 ADAM32Q8TC27 787 aa7.07□□□□□ -1.28
NUP98-218ENST00000530516 DZIP3Q86Y13 1208 aaKnown RBP7.06□□□□□ -1.28
NUP98-218ENST00000530516 ZNF592Q92610 1267 aa7.06□□□□□ -1.28
NUP98-218ENST00000530516 FIGNL2A6NMB9 653 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 ADH1AP07327 375 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 ITGA6P23229 1130 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 PROCA1Q8NCQ7 364 aaPredicted RBP7.05□□□□□ -1.28
NUP98-218ENST00000530516 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
NUP98-218ENST00000530516 USP17L8P0C7I0 530 aa7.04□□□□□ -1.28
NUP98-218ENST00000530516 RELBQ01201 579 aa7.04□□□□□ -1.28
NUP98-218ENST00000530516 IL27Q8NEV9 243 aa7.04□□□□□ -1.28
NUP98-218ENST00000530516 OCSTAMPQ9BR26 566 aa7.04□□□□□ -1.28
NUP98-218ENST00000530516 COL25A1Q9BXS0 654 aaPredicted RBP7.04□□□□□ -1.28
NUP98-218ENST00000530516 POLMQ9NP87 494 aaPredicted RBP7.04□□□□□ -1.28
NUP98-218ENST00000530516 ESPNB1AK53 854 aa7.03□□□□□ -1.28
NUP98-218ENST00000530516 SLURP2P0DP57 97 aa7.03□□□□□ -1.28
NUP98-218ENST00000530516 RNF217Q8TC41 542 aa7.03□□□□□ -1.28
NUP98-218ENST00000530516 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
NUP98-218ENST00000530516 CTSOP43234 321 aaPredicted RBP7.02□□□□□ -1.29
NUP98-218ENST00000530516 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
NUP98-218ENST00000530516 KRT76Q01546 638 aa7.02□□□□□ -1.29
NUP98-218ENST00000530516 TMEM259Q4ZIN3 620 aa7.02□□□□□ -1.29
NUP98-218ENST00000530516 GPR161Q8N6U8 529 aaKnown RBP7.02□□□□□ -1.29
NUP98-218ENST00000530516 ZNF784Q8NCA9 323 aaPredicted RBP7.02□□□□□ -1.29
NUP98-218ENST00000530516 AGBL1Q96MI9 1066 aa7.02□□□□□ -1.29
NUP98-218ENST00000530516 INSM2Q96T92 566 aaPredicted RBP7.02□□□□□ -1.29
NUP98-218ENST00000530516 ERVH48-1M5A8F1 160 aa7.01□□□□□ -1.29
NUP98-218ENST00000530516 RFC5P40937 340 aa7.01□□□□□ -1.29
NUP98-218ENST00000530516 PTGIRP43119 386 aa7.01□□□□□ -1.29
NUP98-218ENST00000530516 TMEM151AQ8N4L1 468 aa7.01□□□□□ -1.29
NUP98-218ENST00000530516 CDC14CA4D256 554 aa7□□□□□ -1.29
NUP98-218ENST00000530516 LILRA1O75019 489 aa7□□□□□ -1.29
NUP98-218ENST00000530516 GPC1P35052 558 aa7□□□□□ -1.29
NUP98-218ENST00000530516 LYSMD3Q7Z3D4 306 aa7□□□□□ -1.29
NUP98-218ENST00000530516 SVOPQ8N4V2 548 aa7□□□□□ -1.29
NUP98-218ENST00000530516 PCMTD1Q96MG8 357 aaPredicted RBP7□□□□□ -1.29
NUP98-218ENST00000530516 ADAMTS8Q9UP79 889 aa7□□□□□ -1.29
NUP98-218ENST00000530516 RNF20Q5VTR2 975 aa6.99□□□□□ -1.29
NUP98-218ENST00000530516 VWA5B2Q8N398 1253 aa6.99□□□□□ -1.29
NUP98-218ENST00000530516 HMX1Q9NP08 348 aaPredicted RBP6.99□□□□□ -1.29
NUP98-218ENST00000530516 TMPRSS4Q9NRS4 437 aa6.99□□□□□ -1.29
NUP98-218ENST00000530516 ZBBXA8MT70 800 aa6.98□□□□□ -1.29
NUP98-218ENST00000530516 RNF144AP50876 292 aaPredicted RBP6.98□□□□□ -1.29
NUP98-218ENST00000530516 RASSF7Q02833 373 aa6.98□□□□□ -1.29
NUP98-218ENST00000530516 ZNF385CQ66K41 422 aaPredicted RBP6.98□□□□□ -1.29
NUP98-218ENST00000530516 KANK3Q6NY19 840 aa6.98□□□□□ -1.29
NUP98-218ENST00000530516 ZNF395Q9H8N7 513 aaPredicted RBP6.98□□□□□ -1.29
NUP98-218ENST00000530516 ZNF330Q9Y3S2 320 aaPredicted RBP6.98□□□□□ -1.29
NUP98-218ENST00000530516 SENP3-EIF4A1A0A087X0R7 540 aa6.97□□□□□ -1.29
NUP98-218ENST00000530516 SOCS7O14512 581 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms