RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-216ENST00000530426 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
LTBP3-216ENST00000530426 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-216ENST00000530426 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
LTBP3-216ENST00000530426 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
LTBP3-216ENST00000530426 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
LTBP3-216ENST00000530426 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
LTBP3-216ENST00000530426 FAM83GA6ND36 823 aa20.56■□□□□ 0.88
LTBP3-216ENST00000530426 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
LTBP3-216ENST00000530426 INSRP06213 1382 aa20.55■□□□□ 0.88
LTBP3-216ENST00000530426 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
LTBP3-216ENST00000530426 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
LTBP3-216ENST00000530426 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
LTBP3-216ENST00000530426 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
LTBP3-216ENST00000530426 EVA1CP58658 441 aa20.53■□□□□ 0.88
LTBP3-216ENST00000530426 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
LTBP3-216ENST00000530426 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
LTBP3-216ENST00000530426 C8orf37Q96NL8 207 aa20.53■□□□□ 0.88
LTBP3-216ENST00000530426 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
LTBP3-216ENST00000530426 COL14A1Q05707 1796 aaKnown RBP20.52■□□□□ 0.88
LTBP3-216ENST00000530426 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
LTBP3-216ENST00000530426 LRP6O75581 1613 aa20.52■□□□□ 0.88
LTBP3-216ENST00000530426 COL18A1P39060 1754 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 COL3A1P02461 1466 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-216ENST00000530426 IL13P35225 146 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 STRN4Q9NRL3 753 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 BTG4Q9NY30 223 aa20.51■□□□□ 0.87
LTBP3-216ENST00000530426 ABCC6O95255 1503 aa20.5■□□□□ 0.87
LTBP3-216ENST00000530426 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
LTBP3-216ENST00000530426 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
LTBP3-216ENST00000530426 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
LTBP3-216ENST00000530426 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
LTBP3-216ENST00000530426 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
LTBP3-216ENST00000530426 ERBB3P21860 1342 aa20.47■□□□□ 0.87
LTBP3-216ENST00000530426 PLCH1Q4KWH8 1693 aa20.46■□□□□ 0.87
LTBP3-216ENST00000530426 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
LTBP3-216ENST00000530426 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
LTBP3-216ENST00000530426 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
LTBP3-216ENST00000530426 EYA1Q99502 592 aa20.45■□□□□ 0.86
LTBP3-216ENST00000530426 HMOX1P09601 288 aa20.44■□□□□ 0.86
LTBP3-216ENST00000530426 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
LTBP3-216ENST00000530426 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
LTBP3-216ENST00000530426 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
LTBP3-216ENST00000530426 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
LTBP3-216ENST00000530426 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
LTBP3-216ENST00000530426 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
LTBP3-216ENST00000530426 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
LTBP3-216ENST00000530426 ILDR1Q86SU0 546 aaPredicted RBP20.42■□□□□ 0.86
LTBP3-216ENST00000530426 USP21Q9UK80 565 aa20.42■□□□□ 0.86
LTBP3-216ENST00000530426 CCDC9Q9Y3X0 531 aaKnown RBP20.42■□□□□ 0.86
LTBP3-216ENST00000530426 SLIT2O94813 1529 aa20.41■□□□□ 0.86
LTBP3-216ENST00000530426 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
LTBP3-216ENST00000530426 AFF2P51816 1311 aa20.4■□□□□ 0.86
LTBP3-216ENST00000530426 UNC5CLQ8IV45 518 aa20.4■□□□□ 0.86
LTBP3-216ENST00000530426 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
LTBP3-216ENST00000530426 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
LTBP3-216ENST00000530426 USP35Q9P2H5 1018 aa20.4■□□□□ 0.86
LTBP3-216ENST00000530426 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
LTBP3-216ENST00000530426 NWD2Q9ULI1 1742 aa20.4■□□□□ 0.86
LTBP3-216ENST00000530426 NEFMP07197 916 aa20.39■□□□□ 0.85
LTBP3-216ENST00000530426 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
LTBP3-216ENST00000530426 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
LTBP3-216ENST00000530426 FNBP4Q8N3X1 1017 aaPredicted RBP20.39■□□□□ 0.85
LTBP3-216ENST00000530426 NRAPQ86VF7 1730 aa20.39■□□□□ 0.85
LTBP3-216ENST00000530426 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
LTBP3-216ENST00000530426 CRB1P82279 1406 aa20.37■□□□□ 0.85
LTBP3-216ENST00000530426 FCHSD2O94868 740 aa20.37■□□□□ 0.85
LTBP3-216ENST00000530426 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
LTBP3-216ENST00000530426 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
LTBP3-216ENST00000530426 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
LTBP3-216ENST00000530426 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
LTBP3-216ENST00000530426 BCL9LQ86UU0 1499 aa20.35■□□□□ 0.85
LTBP3-216ENST00000530426 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
LTBP3-216ENST00000530426 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
LTBP3-216ENST00000530426 VPS72Q15906 364 aa20.33■□□□□ 0.85
LTBP3-216ENST00000530426 SENP3-EIF4A1A0A087X0R7 540 aa20.32■□□□□ 0.84
LTBP3-216ENST00000530426 TATP17735 454 aaPredicted RBP20.32■□□□□ 0.84
LTBP3-216ENST00000530426 KDRP35968 1356 aa20.32■□□□□ 0.84
LTBP3-216ENST00000530426 SPATA31A5Q5VU36 1347 aa20.31■□□□□ 0.84
LTBP3-216ENST00000530426 SPATA31A7Q8IWB4 1347 aa20.31■□□□□ 0.84
LTBP3-216ENST00000530426 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
LTBP3-216ENST00000530426 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
LTBP3-216ENST00000530426 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-216ENST00000530426 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
LTBP3-216ENST00000530426 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
LTBP3-216ENST00000530426 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
LTBP3-216ENST00000530426 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
LTBP3-216ENST00000530426 NCAPD2Q15021 1401 aa20.29■□□□□ 0.84
LTBP3-216ENST00000530426 IL2RBP14784 551 aa20.29■□□□□ 0.84
LTBP3-216ENST00000530426 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
LTBP3-216ENST00000530426 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
LTBP3-216ENST00000530426 APAF1O14727 1248 aa20.28■□□□□ 0.84
LTBP3-216ENST00000530426 PLEKHO1Q53GL0 409 aaPredicted RBP20.28■□□□□ 0.84
LTBP3-216ENST00000530426 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
LTBP3-216ENST00000530426 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
LTBP3-216ENST00000530426 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
LTBP3-216ENST00000530426 NEUROD2Q15784 382 aa20.27■□□□□ 0.84
LTBP3-216ENST00000530426 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms