RNA–Protein interactions for RNA: ENST00000529998.5

UBASH3B-205, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 4

Gene UBASH3B, Length 698 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-205ENST00000529998 GJD4Q96KN9 370 aaPredicted RBP11.98□□□□□ -0.49
UBASH3B-205ENST00000529998 AXIN2Q9Y2T1 843 aa11.98□□□□□ -0.49
UBASH3B-205ENST00000529998 AATKQ6ZMQ8 1374 aa11.97□□□□□ -0.49
UBASH3B-205ENST00000529998 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
UBASH3B-205ENST00000529998 CGNL1Q0VF96 1302 aa11.96□□□□□ -0.49
UBASH3B-205ENST00000529998 CCDC9Q9Y3X0 531 aaKnown RBP11.96□□□□□ -0.49
UBASH3B-205ENST00000529998 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
UBASH3B-205ENST00000529998 EVA1CP58658 441 aa11.95□□□□□ -0.5
UBASH3B-205ENST00000529998 COL5A2P05997 1499 aaPredicted RBP11.95□□□□□ -0.5
UBASH3B-205ENST00000529998 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
UBASH3B-205ENST00000529998 SPATA31A5Q5VU36 1347 aa11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 SPATA31A7Q8IWB4 1347 aa11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 LARP1Q6PKG0 1096 aaKnown RBP11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 RGS12O14924 1447 aa11.94□□□□□ -0.5
UBASH3B-205ENST00000529998 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
UBASH3B-205ENST00000529998 RRS1Q15050 365 aaKnown RBP11.93□□□□□ -0.5
UBASH3B-205ENST00000529998 KNSTRNQ9Y448 316 aa11.93□□□□□ -0.5
UBASH3B-205ENST00000529998 MAP3K19Q56UN5 1328 aa11.92□□□□□ -0.5
UBASH3B-205ENST00000529998 SPATA31A1Q5TZJ5 1347 aa11.92□□□□□ -0.5
UBASH3B-205ENST00000529998 ABCC6O95255 1503 aa11.92□□□□□ -0.5
UBASH3B-205ENST00000529998 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 IP6K1Q92551 441 aa11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 USP35Q9P2H5 1018 aa11.91□□□□□ -0.5
UBASH3B-205ENST00000529998 WDR17Q8IZU2 1322 aa11.9□□□□□ -0.5
UBASH3B-205ENST00000529998 HOXC9P31274 260 aa11.9□□□□□ -0.5
UBASH3B-205ENST00000529998 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
UBASH3B-205ENST00000529998 CRB1P82279 1406 aa11.9□□□□□ -0.5
UBASH3B-205ENST00000529998 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
UBASH3B-205ENST00000529998 RGPD2P0DJD1 1756 aa11.9□□□□□ -0.51
UBASH3B-205ENST00000529998 AMPHP49418 695 aa11.89□□□□□ -0.51
UBASH3B-205ENST00000529998 TOM1L2Q6ZVM7 507 aa11.89□□□□□ -0.51
UBASH3B-205ENST00000529998 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
UBASH3B-205ENST00000529998 NSD2O96028 1365 aa11.89□□□□□ -0.51
UBASH3B-205ENST00000529998 ERBB3P21860 1342 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 SOCS7O14512 581 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 CSB-PGBD3P0DP91 1061 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 LTV1Q96GA3 475 aaPredicted RBP11.88□□□□□ -0.51
UBASH3B-205ENST00000529998 HSP90AB2PQ58FF8 381 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 CARD10Q9BWT7 1032 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 WNK3Q9BYP7 1800 aa11.87□□□□□ -0.51
UBASH3B-205ENST00000529998 A0A0G2JS52 829 aa11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 PPM1GO15355 546 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 MYT1Q01538 1121 aa11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 CNGB1Q14028 1251 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-205ENST00000529998 FLT4P35916 1363 aa11.85□□□□□ -0.51
UBASH3B-205ENST00000529998 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
UBASH3B-205ENST00000529998 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
UBASH3B-205ENST00000529998 INSRP06213 1382 aa11.84□□□□□ -0.51
UBASH3B-205ENST00000529998 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
UBASH3B-205ENST00000529998 EP400Q96L91 3159 aa11.83□□□□□ -0.51
UBASH3B-205ENST00000529998 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
UBASH3B-205ENST00000529998 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
UBASH3B-205ENST00000529998 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 DISP2A7MBM2 1401 aa11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 SMG6Q86US8 1419 aaKnown RBP11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
UBASH3B-205ENST00000529998 USHBP1Q8N6Y0 703 aa11.81□□□□□ -0.52
UBASH3B-205ENST00000529998 UPF1Q92900 1129 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBASH3B-205ENST00000529998 IL2RBP14784 551 aa11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 MTHFSP49914 203 aa11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 PDE3BQ13370 1112 aa11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 EIF4A2Q14240 407 aaKnown RBP11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 DDB1Q16531 1140 aa11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
UBASH3B-205ENST00000529998 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
UBASH3B-205ENST00000529998 EXOC5O00471 708 aa11.78□□□□□ -0.52
UBASH3B-205ENST00000529998 EYA1Q99502 592 aa11.78□□□□□ -0.52
UBASH3B-205ENST00000529998 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
UBASH3B-205ENST00000529998 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.53
UBASH3B-205ENST00000529998 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
UBASH3B-205ENST00000529998 MEGF6O75095 1541 aa11.76□□□□□ -0.53
UBASH3B-205ENST00000529998 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
UBASH3B-205ENST00000529998 NCAPD2Q15021 1401 aa11.76□□□□□ -0.53
UBASH3B-205ENST00000529998 RGPD1P0DJD0 1748 aa11.75□□□□□ -0.53
UBASH3B-205ENST00000529998 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
UBASH3B-205ENST00000529998 IL13P35225 146 aa11.75□□□□□ -0.53
UBASH3B-205ENST00000529998 FAM196AQ6ZSG2 479 aa11.75□□□□□ -0.53
UBASH3B-205ENST00000529998 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
UBASH3B-205ENST00000529998 RAPGEF4Q8WZA2 1011 aa11.74□□□□□ -0.53
UBASH3B-205ENST00000529998 IGSF1Q8N6C5 1336 aa11.74□□□□□ -0.53
UBASH3B-205ENST00000529998 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms