RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
SVIP-203ENST00000529848 NBPF20Q3BBV1 942 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 MAP7D1Q3KQU3 841 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 RNF20Q5VTR2 975 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 PLEKHM2Q8IWE5 1019 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 PLPP7Q8NBV4 271 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 TRAIPQ9BWF2 469 aa7.21□□□□□ -1.26
SVIP-203ENST00000529848 LZTS3O60299 673 aaPredicted RBP7.2□□□□□ -1.26
SVIP-203ENST00000529848 ATG7O95352 703 aa7.2□□□□□ -1.26
SVIP-203ENST00000529848 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
SVIP-203ENST00000529848 EML3Q32P44 896 aa7.2□□□□□ -1.26
SVIP-203ENST00000529848 PHTF2Q8N3S3 785 aa7.2□□□□□ -1.26
SVIP-203ENST00000529848 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
SVIP-203ENST00000529848 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
SVIP-203ENST00000529848 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
SVIP-203ENST00000529848 NCOA4Q13772 614 aa7.19□□□□□ -1.26
SVIP-203ENST00000529848 TRMT44Q8IYL2 757 aaKnown RBP7.19□□□□□ -1.26
SVIP-203ENST00000529848 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
SVIP-203ENST00000529848 DOLKQ9UPQ8 538 aa7.19□□□□□ -1.26
SVIP-203ENST00000529848 USTQ9Y2C2 406 aa7.19□□□□□ -1.26
SVIP-203ENST00000529848 ATP5J2-PTCD1G3V325 749 aa7.18□□□□□ -1.26
SVIP-203ENST00000529848 SKOR1P84550 965 aa7.18□□□□□ -1.26
SVIP-203ENST00000529848 KANK4Q5T7N3 995 aaPredicted RBP7.18□□□□□ -1.26
SVIP-203ENST00000529848 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
SVIP-203ENST00000529848 ZBTB7CA1YPR0 619 aa7.17□□□□□ -1.26
SVIP-203ENST00000529848 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
SVIP-203ENST00000529848 LARP1Q6PKG0 1096 aaKnown RBP7.17□□□□□ -1.26
SVIP-203ENST00000529848 VASH1Q7L8A9 365 aaPredicted RBP7.17□□□□□ -1.26
SVIP-203ENST00000529848 CHIC2Q9UKJ5 165 aa7.17□□□□□ -1.26
SVIP-203ENST00000529848 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
SVIP-203ENST00000529848 TRIM26Q12899 539 aaPredicted RBP7.16□□□□□ -1.26
SVIP-203ENST00000529848 TRAF7Q6Q0C0 670 aa7.16□□□□□ -1.26
SVIP-203ENST00000529848 TRIM50Q86XT4 487 aa7.16□□□□□ -1.26
SVIP-203ENST00000529848 CCDC125Q86Z20 511 aa7.16□□□□□ -1.26
SVIP-203ENST00000529848 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
SVIP-203ENST00000529848 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
SVIP-203ENST00000529848 EMID1Q96A84 441 aaPredicted RBP7.16□□□□□ -1.26
SVIP-203ENST00000529848 CCDC85AQ96PX6 553 aaPredicted RBP7.16□□□□□ -1.26
SVIP-203ENST00000529848 KCTD15Q96SI1 283 aaPredicted RBP7.16□□□□□ -1.26
SVIP-203ENST00000529848 FAM196BA6NMK8 535 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 ESPNB1AK53 854 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L10C9JJH3 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L21D6R901 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 RASA1P20936 1047 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 ATP1A2P50993 1020 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 RAB15P59190 212 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 ELOAQ14241 798 aaKnown RBP7.15□□□□□ -1.26
SVIP-203ENST00000529848 ARID5BQ14865 1188 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.26
SVIP-203ENST00000529848 AEBP1Q8IUX7 1158 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 SIRT1Q96EB6 747 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 NOVA2Q9UNW9 492 aaKnown RBP7.15□□□□□ -1.26
SVIP-203ENST00000529848 MAP4K5Q9Y4K4 846 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
SVIP-203ENST00000529848 TSGA10IPQ3SY00 556 aa7.14□□□□□ -1.27
SVIP-203ENST00000529848 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
SVIP-203ENST00000529848 SLC19A1P41440 591 aa7.13□□□□□ -1.27
SVIP-203ENST00000529848 CRTC2Q53ET0 693 aaPredicted RBP7.13□□□□□ -1.27
SVIP-203ENST00000529848 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
SVIP-203ENST00000529848 DNAAF2Q9NVR5 837 aaKnown RBP7.13□□□□□ -1.27
SVIP-203ENST00000529848 USP4Q13107 963 aa7.12□□□□□ -1.27
SVIP-203ENST00000529848 PTK7Q13308 1070 aa7.12□□□□□ -1.27
SVIP-203ENST00000529848 INTS6LQ5JSJ4 861 aaKnown RBP7.12□□□□□ -1.27
SVIP-203ENST00000529848 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
SVIP-203ENST00000529848 FAM200AQ8TCP9 573 aa7.12□□□□□ -1.27
SVIP-203ENST00000529848 CDCA7Q9BWT1 371 aaPredicted RBP7.12□□□□□ -1.27
SVIP-203ENST00000529848 ESF1Q9H501 851 aaKnown RBP7.12□□□□□ -1.27
SVIP-203ENST00000529848 PODXL2Q9NZ53 605 aa7.12□□□□□ -1.27
SVIP-203ENST00000529848 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
SVIP-203ENST00000529848 PATL2C9JE40 543 aaKnown RBP7.11□□□□□ -1.27
SVIP-203ENST00000529848 MYCP01106 439 aaPredicted RBP7.11□□□□□ -1.27
SVIP-203ENST00000529848 FSHRP23945 695 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 GTF2IP78347 998 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 STK32AQ8WU08 396 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
SVIP-203ENST00000529848 ZMIZ1Q9ULJ6 1067 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
SVIP-203ENST00000529848 CARNS1A5YM72 827 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 TMEM88BA6NKF7 163 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 WNT7AO00755 349 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 PSME1Q06323 249 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 DHX9Q08211 1270 aaKnown RBP7.1□□□□□ -1.27
SVIP-203ENST00000529848 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 MPNDQ8N594 471 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 CDK15Q96Q40 435 aa7.1□□□□□ -1.27
SVIP-203ENST00000529848 ERVH48-1M5A8F1 160 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms