RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
TGFBR3-208ENST00000529608 LARP1Q6PKG0 1096 aaKnown RBP12.5□□□□□ -0.41
TGFBR3-208ENST00000529608 PEAK1Q9H792 1746 aa12.5□□□□□ -0.41
TGFBR3-208ENST00000529608 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
TGFBR3-208ENST00000529608 APBA3O96018 575 aa12.49□□□□□ -0.41
TGFBR3-208ENST00000529608 FAM196AQ6ZSG2 479 aa12.49□□□□□ -0.41
TGFBR3-208ENST00000529608 USP19O94966 1318 aa12.48□□□□□ -0.41
TGFBR3-208ENST00000529608 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
TGFBR3-208ENST00000529608 WNK3Q9BYP7 1800 aa12.47□□□□□ -0.41
TGFBR3-208ENST00000529608 PLEKHG3A1L390 1219 aa12.47□□□□□ -0.41
TGFBR3-208ENST00000529608 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
TGFBR3-208ENST00000529608 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
TGFBR3-208ENST00000529608 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
TGFBR3-208ENST00000529608 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 COL18A1P39060 1754 aa12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 CPDO75976 1380 aa12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 ABTB2Q8N961 1025 aa12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
TGFBR3-208ENST00000529608 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 EVA1CP58658 441 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 RGPD5Q99666 1765 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
TGFBR3-208ENST00000529608 GCP02774 474 aa12.44□□□□□ -0.42
TGFBR3-208ENST00000529608 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
TGFBR3-208ENST00000529608 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
TGFBR3-208ENST00000529608 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
TGFBR3-208ENST00000529608 RGPD3A6NKT7 1758 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-208ENST00000529608 RGPD4Q7Z3J3 1758 aa12.43□□□□□ -0.42
TGFBR3-208ENST00000529608 CASZ1Q86V15 1759 aa12.43□□□□□ -0.42
TGFBR3-208ENST00000529608 SLIT3O75094 1523 aa12.43□□□□□ -0.42
TGFBR3-208ENST00000529608 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
TGFBR3-208ENST00000529608 CRB1P82279 1406 aa12.41□□□□□ -0.42
TGFBR3-208ENST00000529608 CREBZFQ9NS37 354 aa12.41□□□□□ -0.42
TGFBR3-208ENST00000529608 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
TGFBR3-208ENST00000529608 USP6P35125 1406 aa12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 SRPK2P78362 688 aaKnown RBP12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 NLRP13Q86W25 1043 aa12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 THRAP3Q9Y2W1 955 aaKnown RBP12.4□□□□□ -0.42
TGFBR3-208ENST00000529608 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
TGFBR3-208ENST00000529608 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
TGFBR3-208ENST00000529608 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
TGFBR3-208ENST00000529608 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 OVOS2A0A0G2JMS6 1433 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 OVOS2A0A0J9YW53 1432 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 OVOS2Q6IE36 1432 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 MYOM1P52179 1685 aa12.38□□□□□ -0.43
TGFBR3-208ENST00000529608 KCNQ2O43526 872 aa12.37□□□□□ -0.43
TGFBR3-208ENST00000529608 NLRP6P59044 892 aa12.37□□□□□ -0.43
TGFBR3-208ENST00000529608 TRPM1Q7Z4N2 1603 aa12.37□□□□□ -0.43
TGFBR3-208ENST00000529608 YY1P25490 414 aa12.36□□□□□ -0.43
TGFBR3-208ENST00000529608 MARCH10Q8NA82 808 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-208ENST00000529608 SPON1Q9HCB6 807 aa12.36□□□□□ -0.43
TGFBR3-208ENST00000529608 PLSCR1O15162 318 aa12.35□□□□□ -0.43
TGFBR3-208ENST00000529608 DDB1Q16531 1140 aa12.35□□□□□ -0.43
TGFBR3-208ENST00000529608 CPSF1Q10570 1443 aaKnown RBP12.35□□□□□ -0.43
TGFBR3-208ENST00000529608 BRD4O60885 1362 aaPredicted RBP12.34□□□□□ -0.43
TGFBR3-208ENST00000529608 NFAT5O94916 1531 aa12.34□□□□□ -0.43
TGFBR3-208ENST00000529608 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
TGFBR3-208ENST00000529608 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
TGFBR3-208ENST00000529608 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
TGFBR3-208ENST00000529608 PPP1R1BQ9UD71 204 aaPredicted RBP12.33□□□□□ -0.44
TGFBR3-208ENST00000529608 NINLQ9Y2I6 1382 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 PTGER2P43116 358 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 FARP1Q9Y4F1 1045 aaPredicted RBP12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
TGFBR3-208ENST00000529608 BCL9O00512 1426 aa12.31□□□□□ -0.44
TGFBR3-208ENST00000529608 SOX12O15370 315 aa12.31□□□□□ -0.44
TGFBR3-208ENST00000529608 ZBTB7AO95365 584 aa12.31□□□□□ -0.44
TGFBR3-208ENST00000529608 L3MBTL2Q969R5 705 aa12.31□□□□□ -0.44
TGFBR3-208ENST00000529608 LTN1O94822 1766 aa12.3□□□□□ -0.44
TGFBR3-208ENST00000529608 PAPPAQ13219 1627 aa12.3□□□□□ -0.44
TGFBR3-208ENST00000529608 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
TGFBR3-208ENST00000529608 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
TGFBR3-208ENST00000529608 TXNRD1Q16881 649 aa12.29□□□□□ -0.44
TGFBR3-208ENST00000529608 BTAF1O14981 1849 aa12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
TGFBR3-208ENST00000529608 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
TGFBR3-208ENST00000529608 HAX1O00165 279 aa12.27□□□□□ -0.45
TGFBR3-208ENST00000529608 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
TGFBR3-208ENST00000529608 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
TGFBR3-208ENST00000529608 SLC15A2Q16348 729 aa12.26□□□□□ -0.45
TGFBR3-208ENST00000529608 UTRNP46939 3433 aa12.26□□□□□ -0.45
TGFBR3-208ENST00000529608 ABCC6O95255 1503 aa12.26□□□□□ -0.45
TGFBR3-208ENST00000529608 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
TGFBR3-208ENST00000529608 KCNH5Q8NCM2 988 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms