RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	TCP11L2	Q8N4U5	519 aa		13.18	□□□□□ -0.3
FGFR1-233	ENST00000529552	PARP4	Q9UKK3	1724 aa	Known RBP	13.18	□□□□□ -0.3
FGFR1-233	ENST00000529552	RREB1	Q92766	1687 aa		13.18	□□□□□ -0.3
FGFR1-233	ENST00000529552	APBA3	O96018	575 aa		13.17	□□□□□ -0.3
FGFR1-233	ENST00000529552	EZH2	Q15910	746 aa	Known RBP	13.17	□□□□□ -0.3
FGFR1-233	ENST00000529552	LARP1	Q6PKG0	1096 aa	Known RBP	13.16	□□□□□ -0.3
FGFR1-233	ENST00000529552	CABP2	Q9NPB3	220 aa		13.16	□□□□□ -0.3
FGFR1-233	ENST00000529552	THRAP3	Q9Y2W1	955 aa	Known RBP	13.16	□□□□□ -0.3
FGFR1-233	ENST00000529552	NUP188	Q5SRE5	1749 aa		13.16	□□□□□ -0.3
FGFR1-233	ENST00000529552	USP6	P35125	1406 aa		13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	ZBTB7C	A1YPR0	619 aa		13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	C11orf95	C9JLR9	678 aa	Predicted RBP	13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	GC	P02774	474 aa		13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	CAMKK2	Q96RR4	588 aa		13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	COL5A2	P05997	1499 aa	Predicted RBP	13.15	□□□□□ -0.3
FGFR1-233	ENST00000529552	CRB1	P82279	1406 aa		13.14	□□□□□ -0.31
FGFR1-233	ENST00000529552	TRPM1	Q7Z4N2	1603 aa		13.14	□□□□□ -0.31
FGFR1-233	ENST00000529552	SLIT3	O75094	1523 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	WNK3	Q9BYP7	1800 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	NLRP6	P59044	892 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	NBPF14	Q5TI25	921 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	PROM2	Q8N271	834 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	LRRC37A3	O60309	1634 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	OVOS2	A0A0G2JMS6	1433 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	OVOS2	A0A0J9YW53	1432 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	OVOS2	Q6IE36	1432 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	EVC2	Q86UK5	1308 aa		13.13	□□□□□ -0.31
FGFR1-233	ENST00000529552	PIK3C2A	O00443	1686 aa		13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	AKT1S1	Q96B36	256 aa		13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	CABP1	Q9NZU7	370 aa		13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	AKAP12	Q02952	1782 aa		13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	RGPD4	Q7Z3J3	1758 aa		13.12	□□□□□ -0.31
FGFR1-233	ENST00000529552	AATK	Q6ZMQ8	1374 aa		13.11	□□□□□ -0.31
FGFR1-233	ENST00000529552	SBF2	Q86WG5	1849 aa		13.11	□□□□□ -0.31
FGFR1-233	ENST00000529552	TOM1L2	Q6ZVM7	507 aa		13.1	□□□□□ -0.31
FGFR1-233	ENST00000529552	ROCK2	O75116	1388 aa	Known RBP	13.09	□□□□□ -0.31
FGFR1-233	ENST00000529552	CPSF1	Q10570	1443 aa	Known RBP	13.09	□□□□□ -0.31
FGFR1-233	ENST00000529552	PEAK1	Q9H792	1746 aa		13.09	□□□□□ -0.31
FGFR1-233	ENST00000529552	COL18A1	P39060	1754 aa		13.09	□□□□□ -0.31
FGFR1-233	ENST00000529552	RGPD5	Q99666	1765 aa		13.08	□□□□□ -0.32
FGFR1-233	ENST00000529552	DDB1	Q16531	1140 aa		13.08	□□□□□ -0.32
FGFR1-233	ENST00000529552	KCNH5	Q8NCM2	988 aa		13.08	□□□□□ -0.32
FGFR1-233	ENST00000529552	L3MBTL2	Q969R5	705 aa		13.08	□□□□□ -0.32
FGFR1-233	ENST00000529552	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.07	□□□□□ -0.32
FGFR1-233	ENST00000529552	WDR17	Q8IZU2	1322 aa		13.07	□□□□□ -0.32
FGFR1-233	ENST00000529552	MON2	Q7Z3U7	1717 aa		13.06	□□□□□ -0.32
FGFR1-233	ENST00000529552	CSB-PGBD3	P0DP91	1061 aa		13.06	□□□□□ -0.32
FGFR1-233	ENST00000529552	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.06	□□□□□ -0.32
FGFR1-233	ENST00000529552	TTC21A	Q8NDW8	1320 aa		13.06	□□□□□ -0.32
FGFR1-233	ENST00000529552	ABCC6	O95255	1503 aa		13.05	□□□□□ -0.32
FGFR1-233	ENST00000529552	TTC21B	Q7Z4L5	1316 aa		13.05	□□□□□ -0.32
FGFR1-233	ENST00000529552	SOX12	O15370	315 aa		13.04	□□□□□ -0.32
FGFR1-233	ENST00000529552	NEUROD1	Q13562	356 aa		13.04	□□□□□ -0.32
FGFR1-233	ENST00000529552	SPON1	Q9HCB6	807 aa		13.04	□□□□□ -0.32
FGFR1-233	ENST00000529552	KTN1	Q86UP2	1357 aa	Known RBP	13.04	□□□□□ -0.32
FGFR1-233	ENST00000529552	NFAT5	O94916	1531 aa		13.03	□□□□□ -0.32
FGFR1-233	ENST00000529552	PLSCR1	O15162	318 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	KCNQ2	O43526	872 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	ARHGEF25	Q86VW2	580 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	SIN3A	Q96ST3	1273 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	CCDC7	Q96M83	1385 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	USP54	Q70EL1	1684 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	LTN1	O94822	1766 aa		13.02	□□□□□ -0.33
FGFR1-233	ENST00000529552	CARD10	Q9BWT7	1032 aa		13.01	□□□□□ -0.33
FGFR1-233	ENST00000529552	AXIN2	Q9Y2T1	843 aa		13.01	□□□□□ -0.33
FGFR1-233	ENST00000529552	SBNO2	Q9Y2G9	1366 aa		13.01	□□□□□ -0.33
FGFR1-233	ENST00000529552	NINL	Q9Y2I6	1382 aa		13.01	□□□□□ -0.33
FGFR1-233	ENST00000529552	BCL9	O00512	1426 aa		13.01	□□□□□ -0.33
FGFR1-233	ENST00000529552	CASZ1	Q86V15	1759 aa		13	□□□□□ -0.33
FGFR1-233	ENST00000529552	TNS2	Q63HR2	1409 aa		12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	EXOC5	O00471	708 aa		12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	MARCH10	Q8NA82	808 aa	Predicted RBP	12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	FBXO3	Q9UK99	471 aa		12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	KAT6B	Q8WYB5	2073 aa		12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	NHS	Q6T4R5	1651 aa		12.99	□□□□□ -0.33
FGFR1-233	ENST00000529552	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.98	□□□□□ -0.33
FGFR1-233	ENST00000529552	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
FGFR1-233	ENST00000529552	USP31	Q70CQ4	1352 aa		12.97	□□□□□ -0.33
FGFR1-233	ENST00000529552	CARD11	Q9BXL7	1154 aa		12.97	□□□□□ -0.33
FGFR1-233	ENST00000529552	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.97	□□□□□ -0.33
FGFR1-233	ENST00000529552	STK32B	Q9NY57	414 aa		12.97	□□□□□ -0.33
FGFR1-233	ENST00000529552	YY1	P25490	414 aa		12.96	□□□□□ -0.33
FGFR1-233	ENST00000529552	TMC1	Q8TDI8	760 aa		12.96	□□□□□ -0.33
FGFR1-233	ENST00000529552	FAM208A	Q9UK61	1670 aa	Known RBP	12.96	□□□□□ -0.34
FGFR1-233	ENST00000529552	ERBB3	P21860	1342 aa		12.95	□□□□□ -0.34
FGFR1-233	ENST00000529552	TXNRD1	Q16881	649 aa		12.95	□□□□□ -0.34
FGFR1-233	ENST00000529552	PTF1A	Q7RTS3	328 aa		12.95	□□□□□ -0.34
FGFR1-233	ENST00000529552	NLRP2	Q9NX02	1062 aa		12.95	□□□□□ -0.34
FGFR1-233	ENST00000529552	EDC4	Q6P2E9	1401 aa	Known RBP	12.95	□□□□□ -0.34
FGFR1-233	ENST00000529552	TONSL	Q96HA7	1378 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	MYOM1	P52179	1685 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	CD163L1	Q9NR16	1453 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	IL2RB	P14784	551 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	NME9	Q86XW9	330 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	TERF2IP	Q9NYB0	399 aa		12.94	□□□□□ -0.34
FGFR1-233	ENST00000529552	BTAF1	O14981	1849 aa		12.93	□□□□□ -0.34
FGFR1-233	ENST00000529552	REM2	Q8IYK8	340 aa	Predicted RBP	12.93	□□□□□ -0.34
FGFR1-233	ENST00000529552	ZBTB7A	O95365	584 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms