RNA–Protein interactions for RNA: ENST00000529477.5

PTP4A2-212, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-212ENST00000529477 USP31Q70CQ4 1352 aa26.53■■□□□ 1.84
PTP4A2-212ENST00000529477 RREB1Q92766 1687 aa26.53■■□□□ 1.84
PTP4A2-212ENST00000529477 R3HDM1Q15032 1099 aaKnown RBP26.52■■□□□ 1.84
PTP4A2-212ENST00000529477 LMO7Q8WWI1 1683 aa26.52■■□□□ 1.84
PTP4A2-212ENST00000529477 CAMTA1Q9Y6Y1 1673 aa26.51■■□□□ 1.83
PTP4A2-212ENST00000529477 AATKQ6ZMQ8 1374 aa26.51■■□□□ 1.83
PTP4A2-212ENST00000529477 HSPA5P11021 654 aaKnown RBP26.51■■□□□ 1.83
PTP4A2-212ENST00000529477 USP54Q70EL1 1684 aa26.5■■□□□ 1.83
PTP4A2-212ENST00000529477 PARD3Q8TEW0 1356 aa26.48■■□□□ 1.83
PTP4A2-212ENST00000529477 SPATA31A1Q5TZJ5 1347 aa26.48■■□□□ 1.83
PTP4A2-212ENST00000529477 NUP188Q5SRE5 1749 aa26.48■■□□□ 1.83
PTP4A2-212ENST00000529477 EZH2Q15910 746 aaKnown RBP26.47■■□□□ 1.83
PTP4A2-212ENST00000529477 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
PTP4A2-212ENST00000529477 CAMKK2Q96RR4 588 aa26.47■■□□□ 1.83
PTP4A2-212ENST00000529477 POLR3GLQ9BT43 218 aa26.47■■□□□ 1.83
PTP4A2-212ENST00000529477 USP35Q9P2H5 1018 aa26.46■■□□□ 1.83
PTP4A2-212ENST00000529477 COL5A2P05997 1499 aaPredicted RBP26.46■■□□□ 1.83
PTP4A2-212ENST00000529477 NFAT5O94916 1531 aa26.45■■□□□ 1.83
PTP4A2-212ENST00000529477 COG3Q96JB2 828 aa26.45■■□□□ 1.82
PTP4A2-212ENST00000529477 LARP1Q6PKG0 1096 aaKnown RBP26.44■■□□□ 1.82
PTP4A2-212ENST00000529477 MYOM1P52179 1685 aa26.44■■□□□ 1.82
PTP4A2-212ENST00000529477 OVOS2A0A0J9YW53 1432 aa26.43■■□□□ 1.82
PTP4A2-212ENST00000529477 OVOS2Q6IE36 1432 aa26.43■■□□□ 1.82
PTP4A2-212ENST00000529477 FAM196AQ6ZSG2 479 aa26.43■■□□□ 1.82
PTP4A2-212ENST00000529477 COL18A1P39060 1754 aa26.42■■□□□ 1.82
PTP4A2-212ENST00000529477 ABCC6O95255 1503 aa26.41■■□□□ 1.82
PTP4A2-212ENST00000529477 TRIM37O94972 964 aa26.41■■□□□ 1.82
PTP4A2-212ENST00000529477 TCP11L2Q8N4U5 519 aa26.41■■□□□ 1.82
PTP4A2-212ENST00000529477 LTN1O94822 1766 aa26.41■■□□□ 1.82
PTP4A2-212ENST00000529477 CRB1P82279 1406 aa26.4■■□□□ 1.82
PTP4A2-212ENST00000529477 THRAP3Q9Y2W1 955 aaKnown RBP26.4■■□□□ 1.82
PTP4A2-212ENST00000529477 RGPD5Q99666 1765 aa26.39■■□□□ 1.82
PTP4A2-212ENST00000529477 CSB-PGBD3P0DP91 1061 aa26.39■■□□□ 1.82
PTP4A2-212ENST00000529477 BARGINQ6ZT62 677 aa26.39■■□□□ 1.82
PTP4A2-212ENST00000529477 TOM1L2Q6ZVM7 507 aa26.39■■□□□ 1.82
PTP4A2-212ENST00000529477 AXIN2Q9Y2T1 843 aa26.38■■□□□ 1.81
PTP4A2-212ENST00000529477 KIF20BQ96Q89 1820 aa26.37■■□□□ 1.81
PTP4A2-212ENST00000529477 WDR17Q8IZU2 1322 aa26.37■■□□□ 1.81
PTP4A2-212ENST00000529477 FYB1O15117 783 aa26.35■■□□□ 1.81
PTP4A2-212ENST00000529477 APBA3O96018 575 aa26.35■■□□□ 1.81
PTP4A2-212ENST00000529477 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
PTP4A2-212ENST00000529477 NSD3Q9BZ95 1437 aa26.34■■□□□ 1.81
PTP4A2-212ENST00000529477 GGNBP2Q9H3C7 697 aa26.34■■□□□ 1.81
PTP4A2-212ENST00000529477 RGPD3A6NKT7 1758 aaPredicted RBP26.33■■□□□ 1.8
PTP4A2-212ENST00000529477 RGPD4Q7Z3J3 1758 aa26.33■■□□□ 1.8
PTP4A2-212ENST00000529477 PDE3BQ13370 1112 aa26.31■■□□□ 1.8
PTP4A2-212ENST00000529477 CARD14Q9BXL6 1004 aa26.31■■□□□ 1.8
PTP4A2-212ENST00000529477 CGNL1Q0VF96 1302 aa26.3■■□□□ 1.8
PTP4A2-212ENST00000529477 AMPHP49418 695 aa26.29■■□□□ 1.8
PTP4A2-212ENST00000529477 CARD10Q9BWT7 1032 aa26.29■■□□□ 1.8
PTP4A2-212ENST00000529477 PEAK1Q9H792 1746 aa26.28■■□□□ 1.8
PTP4A2-212ENST00000529477 CDCA7Q9BWT1 371 aaPredicted RBP26.28■■□□□ 1.8
PTP4A2-212ENST00000529477 ERBB3P21860 1342 aa26.28■■□□□ 1.8
PTP4A2-212ENST00000529477 IP6K1Q92551 441 aa26.27■■□□□ 1.8
PTP4A2-212ENST00000529477 CCDC7Q96M83 1385 aa26.27■■□□□ 1.8
PTP4A2-212ENST00000529477 SBF2Q86WG5 1849 aa26.26■■□□□ 1.79
PTP4A2-212ENST00000529477 MAP3K19Q56UN5 1328 aa26.26■■□□□ 1.79
PTP4A2-212ENST00000529477 ANKRD24Q8TF21 1146 aa26.26■■□□□ 1.79
PTP4A2-212ENST00000529477 NLRP2Q9NX02 1062 aa26.26■■□□□ 1.79
PTP4A2-212ENST00000529477 NBPF14Q5TI25 921 aa26.24■■□□□ 1.79
PTP4A2-212ENST00000529477 PANK3Q9H999 370 aa26.24■■□□□ 1.79
PTP4A2-212ENST00000529477 WNK3Q9BYP7 1800 aa26.23■■□□□ 1.79
PTP4A2-212ENST00000529477 C11orf95C9JLR9 678 aaPredicted RBP26.23■■□□□ 1.79
PTP4A2-212ENST00000529477 YY1P25490 414 aa26.23■■□□□ 1.79
PTP4A2-212ENST00000529477 DDB1Q16531 1140 aa26.23■■□□□ 1.79
PTP4A2-212ENST00000529477 RTL1A6NKG5 1358 aa26.22■■□□□ 1.79
PTP4A2-212ENST00000529477 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
PTP4A2-212ENST00000529477 LRRC37A3O60309 1634 aa26.21■■□□□ 1.79
PTP4A2-212ENST00000529477 FBLN1P23142 703 aa26.21■■□□□ 1.79
PTP4A2-212ENST00000529477 HOXC9P31274 260 aa26.21■■□□□ 1.79
PTP4A2-212ENST00000529477 RRS1Q15050 365 aaKnown RBP26.21■■□□□ 1.79
PTP4A2-212ENST00000529477 CASZ1Q86V15 1759 aa26.2■■□□□ 1.79
PTP4A2-212ENST00000529477 LTV1Q96GA3 475 aaPredicted RBP26.2■■□□□ 1.78
PTP4A2-212ENST00000529477 KIF7Q2M1P5 1343 aa26.19■■□□□ 1.78
PTP4A2-212ENST00000529477 SPON1Q9HCB6 807 aa26.19■■□□□ 1.78
PTP4A2-212ENST00000529477 OVOS2A0A0G2JMS6 1433 aa26.18■■□□□ 1.78
PTP4A2-212ENST00000529477 KIF24Q5T7B8 1368 aa26.18■■□□□ 1.78
PTP4A2-212ENST00000529477 SMG6Q86US8 1419 aaKnown RBP26.17■■□□□ 1.78
PTP4A2-212ENST00000529477 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
PTP4A2-212ENST00000529477 ANKRD26Q9UPS8 1709 aa26.17■■□□□ 1.78
PTP4A2-212ENST00000529477 KCNQ2O43526 872 aa26.16■■□□□ 1.78
PTP4A2-212ENST00000529477 EXOC5O00471 708 aa26.15■■□□□ 1.78
PTP4A2-212ENST00000529477 NSD2O96028 1365 aa26.15■■□□□ 1.78
PTP4A2-212ENST00000529477 FLT4P35916 1363 aa26.15■■□□□ 1.78
PTP4A2-212ENST00000529477 IL2RBP14784 551 aa26.14■■□□□ 1.78
PTP4A2-212ENST00000529477 PPP1R1BQ9UD71 204 aaPredicted RBP26.13■■□□□ 1.77
PTP4A2-212ENST00000529477 MAP2P11137 1827 aaKnown RBP26.12■■□□□ 1.77
PTP4A2-212ENST00000529477 PPM1GO15355 546 aaPredicted RBP26.12■■□□□ 1.77
PTP4A2-212ENST00000529477 INSRP06213 1382 aa26.11■■□□□ 1.77
PTP4A2-212ENST00000529477 PLSCR1O15162 318 aa26.11■■□□□ 1.77
PTP4A2-212ENST00000529477 TNS2Q63HR2 1409 aa26.09■■□□□ 1.77
PTP4A2-212ENST00000529477 TNNT2P45379 298 aaPredicted RBP26.09■■□□□ 1.77
PTP4A2-212ENST00000529477 EMILIN1Q9Y6C2 1016 aa26.09■■□□□ 1.77
PTP4A2-212ENST00000529477 BCL9O00512 1426 aa26.08■■□□□ 1.77
PTP4A2-212ENST00000529477 HSP90AB2PQ58FF8 381 aa26.08■■□□□ 1.77
PTP4A2-212ENST00000529477 MORC1Q86VD1 984 aa26.07■■□□□ 1.76
PTP4A2-212ENST00000529477 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
PTP4A2-212ENST00000529477 RGPD2P0DJD1 1756 aa26.07■■□□□ 1.76
PTP4A2-212ENST00000529477 MARCH10Q8NA82 808 aaPredicted RBP26.05■■□□□ 1.76
PTP4A2-212ENST00000529477 DCAF8L1A6NGE4 600 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms