RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 CPDO75976 1380 aa15.95■□□□□ 0.14
CCDC90B-211ENST00000529073 GJD4Q96KN9 370 aaPredicted RBP15.94■□□□□ 0.14
CCDC90B-211ENST00000529073 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
CCDC90B-211ENST00000529073 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
CCDC90B-211ENST00000529073 COL5A2P05997 1499 aaPredicted RBP15.94■□□□□ 0.14
CCDC90B-211ENST00000529073 CDK12Q9NYV4 1490 aaPredicted RBP15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 NINLQ9Y2I6 1382 aa15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 VPS72Q15906 364 aa15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 GGNBP2Q9H3C7 697 aa15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 TERF2IPQ9NYB0 399 aa15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 KIF7Q2M1P5 1343 aa15.93■□□□□ 0.14
CCDC90B-211ENST00000529073 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
CCDC90B-211ENST00000529073 PEAK1Q9H792 1746 aa15.92■□□□□ 0.14
CCDC90B-211ENST00000529073 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
CCDC90B-211ENST00000529073 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
CCDC90B-211ENST00000529073 ARHGEF25Q86VW2 580 aa15.9■□□□□ 0.14
CCDC90B-211ENST00000529073 USP35Q9P2H5 1018 aa15.9■□□□□ 0.14
CCDC90B-211ENST00000529073 SPATA31A5Q5VU36 1347 aa15.9■□□□□ 0.14
CCDC90B-211ENST00000529073 SPATA31A7Q8IWB4 1347 aa15.9■□□□□ 0.14
CCDC90B-211ENST00000529073 FYB1O15117 783 aa15.89■□□□□ 0.13
CCDC90B-211ENST00000529073 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
CCDC90B-211ENST00000529073 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
CCDC90B-211ENST00000529073 SPATA31A1Q5TZJ5 1347 aa15.88■□□□□ 0.13
CCDC90B-211ENST00000529073 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 EP400Q96L91 3159 aa15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 RRS1Q15050 365 aaKnown RBP15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 SEPT12Q8IYM1 358 aa15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
CCDC90B-211ENST00000529073 ANKRD26Q9UPS8 1709 aa15.86■□□□□ 0.13
CCDC90B-211ENST00000529073 PANK3Q9H999 370 aa15.86■□□□□ 0.13
CCDC90B-211ENST00000529073 LRRC37A3O60309 1634 aa15.85■□□□□ 0.13
CCDC90B-211ENST00000529073 MAP3K19Q56UN5 1328 aa15.85■□□□□ 0.13
CCDC90B-211ENST00000529073 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
CCDC90B-211ENST00000529073 A0A0G2JS52 829 aa15.84■□□□□ 0.13
CCDC90B-211ENST00000529073 MYT1Q01538 1121 aa15.84■□□□□ 0.13
CCDC90B-211ENST00000529073 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
CCDC90B-211ENST00000529073 UPF1Q92900 1129 aaKnown RBP eCLIP15.83■□□□□ 0.12
CCDC90B-211ENST00000529073 COG3Q96JB2 828 aa15.83■□□□□ 0.12
CCDC90B-211ENST00000529073 EVA1CP58658 441 aa15.82■□□□□ 0.12
CCDC90B-211ENST00000529073 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
CCDC90B-211ENST00000529073 LTV1Q96GA3 475 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-211ENST00000529073 CRB1P82279 1406 aa15.82■□□□□ 0.12
CCDC90B-211ENST00000529073 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
CCDC90B-211ENST00000529073 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
CCDC90B-211ENST00000529073 PARP4Q9UKK3 1724 aaKnown RBP15.8■□□□□ 0.12
CCDC90B-211ENST00000529073 WDR17Q8IZU2 1322 aa15.8■□□□□ 0.12
CCDC90B-211ENST00000529073 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
CCDC90B-211ENST00000529073 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-211ENST00000529073 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-211ENST00000529073 ABCC6O95255 1503 aa15.79■□□□□ 0.12
CCDC90B-211ENST00000529073 ONECUT3O60422 494 aaPredicted RBP15.79■□□□□ 0.12
CCDC90B-211ENST00000529073 DISP2A7MBM2 1401 aa15.78■□□□□ 0.12
CCDC90B-211ENST00000529073 ERBB3P21860 1342 aa15.78■□□□□ 0.12
CCDC90B-211ENST00000529073 HOXC9P31274 260 aa15.78■□□□□ 0.12
CCDC90B-211ENST00000529073 TOM1L2Q6ZVM7 507 aa15.78■□□□□ 0.12
CCDC90B-211ENST00000529073 ANKRD24Q8TF21 1146 aa15.78■□□□□ 0.12
CCDC90B-211ENST00000529073 CSB-PGBD3P0DP91 1061 aa15.77■□□□□ 0.12
CCDC90B-211ENST00000529073 USHBP1Q8N6Y0 703 aa15.77■□□□□ 0.12
CCDC90B-211ENST00000529073 KRT27Q7Z3Y8 459 aa15.76■□□□□ 0.11
CCDC90B-211ENST00000529073 TCP11L2Q8N4U5 519 aa15.76■□□□□ 0.11
CCDC90B-211ENST00000529073 TNS1Q9HBL0 1735 aaKnown RBP15.76■□□□□ 0.11
CCDC90B-211ENST00000529073 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
CCDC90B-211ENST00000529073 HSP90AB2PQ58FF8 381 aa15.75■□□□□ 0.11
CCDC90B-211ENST00000529073 IP6K1Q92551 441 aa15.75■□□□□ 0.11
CCDC90B-211ENST00000529073 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
CCDC90B-211ENST00000529073 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
CCDC90B-211ENST00000529073 AMPHP49418 695 aa15.74■□□□□ 0.11
CCDC90B-211ENST00000529073 BLMP54132 1417 aaPredicted RBP15.74■□□□□ 0.11
CCDC90B-211ENST00000529073 MEGF6O75095 1541 aa15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 AMER1Q5JTC6 1135 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 BARGINQ6ZT62 677 aa15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 PTF1AQ7RTS3 328 aa15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 NLRP2Q9NX02 1062 aa15.73■□□□□ 0.11
CCDC90B-211ENST00000529073 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-211ENST00000529073 CARD10Q9BWT7 1032 aa15.72■□□□□ 0.11
CCDC90B-211ENST00000529073 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
CCDC90B-211ENST00000529073 DEFB132Q7Z7B7 95 aa15.71■□□□□ 0.11
CCDC90B-211ENST00000529073 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
CCDC90B-211ENST00000529073 RTL1A6NKG5 1358 aa15.71■□□□□ 0.11
CCDC90B-211ENST00000529073 NBPF6Q5VWK0 638 aa15.7■□□□□ 0.1
CCDC90B-211ENST00000529073 NBPF4Q96M43 638 aa15.7■□□□□ 0.1
CCDC90B-211ENST00000529073 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
CCDC90B-211ENST00000529073 FLT4P35916 1363 aa15.69■□□□□ 0.1
CCDC90B-211ENST00000529073 TNS2Q63HR2 1409 aa15.68■□□□□ 0.1
CCDC90B-211ENST00000529073 INSRP06213 1382 aa15.68■□□□□ 0.1
CCDC90B-211ENST00000529073 MARCH10Q8NA82 808 aaPredicted RBP15.68■□□□□ 0.1
CCDC90B-211ENST00000529073 SBF2Q86WG5 1849 aa15.68■□□□□ 0.1
CCDC90B-211ENST00000529073 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
CCDC90B-211ENST00000529073 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
CCDC90B-211ENST00000529073 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
CCDC90B-211ENST00000529073 RGPD1P0DJD0 1748 aa15.67■□□□□ 0.1
CCDC90B-211ENST00000529073 MORC1Q86VD1 984 aa15.66■□□□□ 0.1
CCDC90B-211ENST00000529073 TRIM37O94972 964 aa15.65■□□□□ 0.1
CCDC90B-211ENST00000529073 NSD2O96028 1365 aa15.64■□□□□ 0.09
CCDC90B-211ENST00000529073 PDE3BQ13370 1112 aa15.64■□□□□ 0.09
CCDC90B-211ENST00000529073 EIF4A2Q14240 407 aaKnown RBP15.64■□□□□ 0.09
CCDC90B-211ENST00000529073 DDB1Q16531 1140 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms