RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 CGNL1Q0VF96 1302 aa24.04■■□□□ 1.44
CHRDL2-206ENST00000528789 COL5A2P05997 1499 aaPredicted RBP24.03■■□□□ 1.44
CHRDL2-206ENST00000528789 ZEB1P37275 1124 aaPredicted RBP24.03■■□□□ 1.44
CHRDL2-206ENST00000528789 LARP1Q6PKG0 1096 aaKnown RBP24.03■■□□□ 1.44
CHRDL2-206ENST00000528789 SPATA31A5Q5VU36 1347 aa24.03■■□□□ 1.44
CHRDL2-206ENST00000528789 SPATA31A7Q8IWB4 1347 aa24.03■■□□□ 1.44
CHRDL2-206ENST00000528789 LTN1O94822 1766 aa24.02■■□□□ 1.44
CHRDL2-206ENST00000528789 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
CHRDL2-206ENST00000528789 RGPD5Q99666 1765 aa24■■□□□ 1.43
CHRDL2-206ENST00000528789 SOCS7O14512 581 aa23.99■■□□□ 1.43
CHRDL2-206ENST00000528789 FAM98CQ17RN3 349 aaKnown RBP23.99■■□□□ 1.43
CHRDL2-206ENST00000528789 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
CHRDL2-206ENST00000528789 RRS1Q15050 365 aaKnown RBP23.98■■□□□ 1.43
CHRDL2-206ENST00000528789 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
CHRDL2-206ENST00000528789 A0A0G2JS52 829 aa23.97■■□□□ 1.43
CHRDL2-206ENST00000528789 CSB-PGBD3P0DP91 1061 aa23.97■■□□□ 1.43
CHRDL2-206ENST00000528789 MYT1Q01538 1121 aa23.97■■□□□ 1.43
CHRDL2-206ENST00000528789 KNSTRNQ9Y448 316 aa23.97■■□□□ 1.43
CHRDL2-206ENST00000528789 ABCC6O95255 1503 aa23.96■■□□□ 1.43
CHRDL2-206ENST00000528789 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
CHRDL2-206ENST00000528789 AMPHP49418 695 aa23.95■■□□□ 1.42
CHRDL2-206ENST00000528789 TOM1L2Q6ZVM7 507 aa23.95■■□□□ 1.42
CHRDL2-206ENST00000528789 CRB1P82279 1406 aa23.94■■□□□ 1.42
CHRDL2-206ENST00000528789 WDR17Q8IZU2 1322 aa23.94■■□□□ 1.42
CHRDL2-206ENST00000528789 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
CHRDL2-206ENST00000528789 IP6K1Q92551 441 aa23.94■■□□□ 1.42
CHRDL2-206ENST00000528789 ONECUT3O60422 494 aaPredicted RBP23.93■■□□□ 1.42
CHRDL2-206ENST00000528789 HOXC9P31274 260 aa23.92■■□□□ 1.42
CHRDL2-206ENST00000528789 TCP11L2Q8N4U5 519 aa23.92■■□□□ 1.42
CHRDL2-206ENST00000528789 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
CHRDL2-206ENST00000528789 LTV1Q96GA3 475 aaPredicted RBP23.92■■□□□ 1.42
CHRDL2-206ENST00000528789 ANKRD26Q9UPS8 1709 aa23.92■■□□□ 1.42
CHRDL2-206ENST00000528789 NSD2O96028 1365 aa23.91■■□□□ 1.42
CHRDL2-206ENST00000528789 ERBB3P21860 1342 aa23.9■■□□□ 1.42
CHRDL2-206ENST00000528789 AMER1Q5JTC6 1135 aaPredicted RBP23.9■■□□□ 1.42
CHRDL2-206ENST00000528789 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
CHRDL2-206ENST00000528789 BLMP54132 1417 aaPredicted RBP23.9■■□□□ 1.42
CHRDL2-206ENST00000528789 PER1O15534 1290 aaPredicted RBP23.89■■□□□ 1.41
CHRDL2-206ENST00000528789 MORC1Q86VD1 984 aa23.89■■□□□ 1.41
CHRDL2-206ENST00000528789 RTL1A6NKG5 1358 aa23.89■■□□□ 1.41
CHRDL2-206ENST00000528789 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.41
CHRDL2-206ENST00000528789 CNGB1Q14028 1251 aaPredicted RBP23.88■■□□□ 1.41
CHRDL2-206ENST00000528789 NLRP2Q9NX02 1062 aa23.88■■□□□ 1.41
CHRDL2-206ENST00000528789 THSD7AQ9UPZ6 1657 aa23.88■■□□□ 1.41
CHRDL2-206ENST00000528789 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
CHRDL2-206ENST00000528789 PPM1GO15355 546 aaPredicted RBP23.87■■□□□ 1.41
CHRDL2-206ENST00000528789 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
CHRDL2-206ENST00000528789 CC2D1BQ5T0F9 858 aaKnown RBP23.86■■□□□ 1.41
CHRDL2-206ENST00000528789 CARD10Q9BWT7 1032 aa23.86■■□□□ 1.41
CHRDL2-206ENST00000528789 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
CHRDL2-206ENST00000528789 HSP90AB2PQ58FF8 381 aa23.85■■□□□ 1.41
CHRDL2-206ENST00000528789 FLT4P35916 1363 aa23.84■■□□□ 1.41
CHRDL2-206ENST00000528789 KRT27Q7Z3Y8 459 aa23.84■■□□□ 1.41
CHRDL2-206ENST00000528789 POLKQ9UBT6 870 aa23.84■■□□□ 1.41
CHRDL2-206ENST00000528789 MAP2P11137 1827 aaKnown RBP23.83■■□□□ 1.41
CHRDL2-206ENST00000528789 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
CHRDL2-206ENST00000528789 INSRP06213 1382 aa23.8■■□□□ 1.4
CHRDL2-206ENST00000528789 FAM182BQ5T319 152 aa23.8■■□□□ 1.4
CHRDL2-206ENST00000528789 UPF1Q92900 1129 aaKnown RBP eCLIP23.79■■□□□ 1.4
CHRDL2-206ENST00000528789 WNK3Q9BYP7 1800 aa23.79■■□□□ 1.4
CHRDL2-206ENST00000528789 SMG6Q86US8 1419 aaKnown RBP23.78■■□□□ 1.4
CHRDL2-206ENST00000528789 DISP2A7MBM2 1401 aa23.77■■□□□ 1.4
CHRDL2-206ENST00000528789 FAM208AQ9UK61 1670 aaKnown RBP23.77■■□□□ 1.4
CHRDL2-206ENST00000528789 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
CHRDL2-206ENST00000528789 RGPD2P0DJD1 1756 aa23.77■■□□□ 1.4
CHRDL2-206ENST00000528789 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
CHRDL2-206ENST00000528789 NBPF6Q5VWK0 638 aa23.76■■□□□ 1.39
CHRDL2-206ENST00000528789 USHBP1Q8N6Y0 703 aa23.76■■□□□ 1.39
CHRDL2-206ENST00000528789 NBPF4Q96M43 638 aa23.76■■□□□ 1.39
CHRDL2-206ENST00000528789 NPC1L1Q9UHC9 1359 aa23.76■■□□□ 1.39
CHRDL2-206ENST00000528789 LRRC37A3O60309 1634 aa23.75■■□□□ 1.39
CHRDL2-206ENST00000528789 DDB1Q16531 1140 aa23.75■■□□□ 1.39
CHRDL2-206ENST00000528789 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
CHRDL2-206ENST00000528789 IL2RBP14784 551 aa23.73■■□□□ 1.39
CHRDL2-206ENST00000528789 DDX10Q13206 875 aaKnown RBP23.73■■□□□ 1.39
CHRDL2-206ENST00000528789 EP400Q96L91 3159 aa23.72■■□□□ 1.39
CHRDL2-206ENST00000528789 EIF4A2Q14240 407 aaKnown RBP23.7■■□□□ 1.38
CHRDL2-206ENST00000528789 EXOC5O00471 708 aa23.69■■□□□ 1.38
CHRDL2-206ENST00000528789 MTHFSP49914 203 aa23.68■■□□□ 1.38
CHRDL2-206ENST00000528789 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
CHRDL2-206ENST00000528789 EYA1Q99502 592 aa23.67■■□□□ 1.38
CHRDL2-206ENST00000528789 MEGF6O75095 1541 aa23.67■■□□□ 1.38
CHRDL2-206ENST00000528789 FAM196AQ6ZSG2 479 aa23.66■■□□□ 1.38
CHRDL2-206ENST00000528789 MARCH10Q8NA82 808 aaPredicted RBP23.66■■□□□ 1.38
CHRDL2-206ENST00000528789 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
CHRDL2-206ENST00000528789 OVOS2A0A0G2JMS6 1433 aa23.63■■□□□ 1.37
CHRDL2-206ENST00000528789 TATP17735 454 aaPredicted RBP23.62■■□□□ 1.37
CHRDL2-206ENST00000528789 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
CHRDL2-206ENST00000528789 TRIM37O94972 964 aa23.61■■□□□ 1.37
CHRDL2-206ENST00000528789 CCDC125Q86Z20 511 aa23.61■■□□□ 1.37
CHRDL2-206ENST00000528789 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
CHRDL2-206ENST00000528789 IL13P35225 146 aa23.6■■□□□ 1.37
CHRDL2-206ENST00000528789 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
CHRDL2-206ENST00000528789 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
CHRDL2-206ENST00000528789 PPP2R1AP30153 589 aa23.59■■□□□ 1.37
CHRDL2-206ENST00000528789 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
CHRDL2-206ENST00000528789 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
CHRDL2-206ENST00000528789 DEFB132Q7Z7B7 95 aa23.57■■□□□ 1.36
CHRDL2-206ENST00000528789 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
CHRDL2-206ENST00000528789 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms