RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
USF1-208ENST00000528768 RGPD3A6NKT7 1758 aaPredicted RBP15.71■□□□□ 0.11
USF1-208ENST00000528768 RGPD4Q7Z3J3 1758 aa15.71■□□□□ 0.11
USF1-208ENST00000528768 ATP7BP35670 1465 aa15.71■□□□□ 0.1
USF1-208ENST00000528768 SSH2Q76I76 1423 aa15.7■□□□□ 0.1
USF1-208ENST00000528768 PLSCR1O15162 318 aa15.7■□□□□ 0.1
USF1-208ENST00000528768 INSRP06213 1382 aa15.7■□□□□ 0.1
USF1-208ENST00000528768 WASLO00401 505 aaPredicted RBP15.69■□□□□ 0.1
USF1-208ENST00000528768 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
USF1-208ENST00000528768 C1QTNF8P60827 252 aa15.68■□□□□ 0.1
USF1-208ENST00000528768 CHRNA2Q15822 529 aa15.68■□□□□ 0.1
USF1-208ENST00000528768 SMG6Q86US8 1419 aaKnown RBP15.68■□□□□ 0.1
USF1-208ENST00000528768 PRR36Q9H6K5 1346 aa15.68■□□□□ 0.1
USF1-208ENST00000528768 OVOS2A0A0G2JMS6 1433 aa15.67■□□□□ 0.1
USF1-208ENST00000528768 OVOS2A0A0J9YW53 1432 aa15.67■□□□□ 0.1
USF1-208ENST00000528768 OVOS2Q6IE36 1432 aa15.67■□□□□ 0.1
USF1-208ENST00000528768 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
USF1-208ENST00000528768 PHRF1Q9P1Y6 1649 aaKnown RBP15.66■□□□□ 0.1
USF1-208ENST00000528768 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
USF1-208ENST00000528768 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
USF1-208ENST00000528768 CPDO75976 1380 aa15.65■□□□□ 0.1
USF1-208ENST00000528768 NPC1L1Q9UHC9 1359 aa15.65■□□□□ 0.1
USF1-208ENST00000528768 NUDCQ9Y266 331 aa15.65■□□□□ 0.1
USF1-208ENST00000528768 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
USF1-208ENST00000528768 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
USF1-208ENST00000528768 MINK1Q8N4C8 1332 aaPredicted RBP15.65■□□□□ 0.1
USF1-208ENST00000528768 CC2D1BQ5T0F9 858 aaKnown RBP15.64■□□□□ 0.09
USF1-208ENST00000528768 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
USF1-208ENST00000528768 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
USF1-208ENST00000528768 CASZ1Q86V15 1759 aa15.64■□□□□ 0.09
USF1-208ENST00000528768 BCL11BQ9C0K0 894 aaPredicted RBP15.63■□□□□ 0.09
USF1-208ENST00000528768 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
USF1-208ENST00000528768 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
USF1-208ENST00000528768 CHD4Q14839 1912 aa15.62■□□□□ 0.09
USF1-208ENST00000528768 ADGRB1O14514 1584 aa15.62■□□□□ 0.09
USF1-208ENST00000528768 SYT17Q9BSW7 474 aa15.61■□□□□ 0.09
USF1-208ENST00000528768 PTGER2P43116 358 aa15.6■□□□□ 0.09
USF1-208ENST00000528768 NUDT16Q96DE0 195 aaKnown RBP15.6■□□□□ 0.09
USF1-208ENST00000528768 PUS7Q96PZ0 661 aaKnown RBP15.6■□□□□ 0.09
USF1-208ENST00000528768 ANO8Q9HCE9 1232 aaPredicted RBP15.6■□□□□ 0.09
USF1-208ENST00000528768 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
USF1-208ENST00000528768 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
USF1-208ENST00000528768 POLR3AO14802 1390 aaPredicted RBP15.6■□□□□ 0.09
USF1-208ENST00000528768 CRB1P82279 1406 aa15.6■□□□□ 0.09
USF1-208ENST00000528768 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
USF1-208ENST00000528768 STK32BQ9NY57 414 aa15.59■□□□□ 0.09
USF1-208ENST00000528768 BCL9O00512 1426 aa15.59■□□□□ 0.09
USF1-208ENST00000528768 MYOM1P52179 1685 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 PEAK1Q9H792 1746 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 DDB1Q16531 1140 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 ABTB2Q8N961 1025 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 CDCA7Q9BWT1 371 aaPredicted RBP15.58■□□□□ 0.08
USF1-208ENST00000528768 FHDC1Q9C0D6 1143 aaPredicted RBP15.58■□□□□ 0.08
USF1-208ENST00000528768 MTFR1LQ9H019 292 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 USP19O94966 1318 aa15.58■□□□□ 0.08
USF1-208ENST00000528768 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
USF1-208ENST00000528768 NUTM2GQ5VZR2 741 aa15.57■□□□□ 0.08
USF1-208ENST00000528768 MAP3K5Q99683 1374 aa15.57■□□□□ 0.08
USF1-208ENST00000528768 COL5A2P05997 1499 aaPredicted RBP15.57■□□□□ 0.08
USF1-208ENST00000528768 AMER1Q5JTC6 1135 aaPredicted RBP15.56■□□□□ 0.08
USF1-208ENST00000528768 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
USF1-208ENST00000528768 UTRNP46939 3433 aa15.56■□□□□ 0.08
USF1-208ENST00000528768 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 ACEP12821 1306 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 PLEKHG3A1L390 1219 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 GIGYF1O75420 1035 aaPredicted RBP15.55■□□□□ 0.08
USF1-208ENST00000528768 GCP02774 474 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 PPP2R1AP30153 589 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 SLC15A2Q16348 729 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 CCDC61Q9Y6R9 512 aa15.55■□□□□ 0.08
USF1-208ENST00000528768 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
USF1-208ENST00000528768 EVC2Q86UK5 1308 aa15.54■□□□□ 0.08
USF1-208ENST00000528768 PROM2Q8N271 834 aa15.53■□□□□ 0.08
USF1-208ENST00000528768 PDGFDQ9GZP0 370 aaPredicted RBP15.53■□□□□ 0.08
USF1-208ENST00000528768 TXNRD1Q16881 649 aa15.52■□□□□ 0.08
USF1-208ENST00000528768 ARXQ96QS3 562 aa15.52■□□□□ 0.08
USF1-208ENST00000528768 SGIP1Q9BQI5 828 aa15.52■□□□□ 0.08
USF1-208ENST00000528768 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
USF1-208ENST00000528768 LRRC37A3O60309 1634 aa15.52■□□□□ 0.08
USF1-208ENST00000528768 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
USF1-208ENST00000528768 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
USF1-208ENST00000528768 TOPAZ1Q8N9V7 1692 aa15.5■□□□□ 0.07
USF1-208ENST00000528768 QRICH2Q9H0J4 1663 aa15.5■□□□□ 0.07
USF1-208ENST00000528768 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
USF1-208ENST00000528768 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
USF1-208ENST00000528768 GPR162Q16538 588 aa15.49■□□□□ 0.07
USF1-208ENST00000528768 MARCH10Q8NA82 808 aaPredicted RBP15.48■□□□□ 0.07
USF1-208ENST00000528768 CEP350Q5VT06 3117 aa15.48■□□□□ 0.07
USF1-208ENST00000528768 WDR17Q8IZU2 1322 aa15.47■□□□□ 0.07
USF1-208ENST00000528768 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
USF1-208ENST00000528768 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
USF1-208ENST00000528768 AKAP12Q02952 1782 aa15.47■□□□□ 0.07
USF1-208ENST00000528768 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
USF1-208ENST00000528768 EXOC5O00471 708 aa15.45■□□□□ 0.06
USF1-208ENST00000528768 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
USF1-208ENST00000528768 NSD2O96028 1365 aa15.45■□□□□ 0.06
USF1-208ENST00000528768 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
USF1-208ENST00000528768 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
USF1-208ENST00000528768 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
USF1-208ENST00000528768 WNK3Q9BYP7 1800 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms