RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 RTL1A6NKG5 1358 aa17.95■□□□□ 0.46
CNKSR1-211ENST00000528001 NPC1L1Q9UHC9 1359 aa17.95■□□□□ 0.46
CNKSR1-211ENST00000528001 PER1O15534 1290 aaPredicted RBP17.95■□□□□ 0.46
CNKSR1-211ENST00000528001 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
CNKSR1-211ENST00000528001 ONECUT3O60422 494 aaPredicted RBP17.94■□□□□ 0.46
CNKSR1-211ENST00000528001 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
CNKSR1-211ENST00000528001 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
CNKSR1-211ENST00000528001 GLI3P10071 1580 aa17.93■□□□□ 0.46
CNKSR1-211ENST00000528001 LTN1O94822 1766 aa17.92■□□□□ 0.46
CNKSR1-211ENST00000528001 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
CNKSR1-211ENST00000528001 IP6K1Q92551 441 aa17.92■□□□□ 0.46
CNKSR1-211ENST00000528001 CRB1P82279 1406 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 EVA1CP58658 441 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 MAP3K19Q56UN5 1328 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 SPATA31A1Q5TZJ5 1347 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
CNKSR1-211ENST00000528001 SOX12O15370 315 aa17.9■□□□□ 0.46
CNKSR1-211ENST00000528001 RGS12O14924 1447 aa17.89■□□□□ 0.46
CNKSR1-211ENST00000528001 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
CNKSR1-211ENST00000528001 ERBB3P21860 1342 aa17.89■□□□□ 0.45
CNKSR1-211ENST00000528001 STRN4Q9NRL3 753 aa17.88■□□□□ 0.45
CNKSR1-211ENST00000528001 FLT4P35916 1363 aa17.88■□□□□ 0.45
CNKSR1-211ENST00000528001 HOXC9P31274 260 aa17.87■□□□□ 0.45
CNKSR1-211ENST00000528001 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
CNKSR1-211ENST00000528001 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
CNKSR1-211ENST00000528001 SMG6Q86US8 1419 aaKnown RBP17.87■□□□□ 0.45
CNKSR1-211ENST00000528001 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
CNKSR1-211ENST00000528001 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
CNKSR1-211ENST00000528001 AMPHP49418 695 aa17.86■□□□□ 0.45
CNKSR1-211ENST00000528001 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
CNKSR1-211ENST00000528001 INSRP06213 1382 aa17.86■□□□□ 0.45
CNKSR1-211ENST00000528001 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
CNKSR1-211ENST00000528001 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
CNKSR1-211ENST00000528001 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
CNKSR1-211ENST00000528001 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
CNKSR1-211ENST00000528001 CDCA7Q9BWT1 371 aaPredicted RBP17.84■□□□□ 0.45
CNKSR1-211ENST00000528001 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
CNKSR1-211ENST00000528001 TOM1L2Q6ZVM7 507 aa17.83■□□□□ 0.44
CNKSR1-211ENST00000528001 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.44
CNKSR1-211ENST00000528001 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
CNKSR1-211ENST00000528001 PEAK1Q9H792 1746 aa17.82■□□□□ 0.44
CNKSR1-211ENST00000528001 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
CNKSR1-211ENST00000528001 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
CNKSR1-211ENST00000528001 FBLN1P23142 703 aa17.81■□□□□ 0.44
CNKSR1-211ENST00000528001 FAM98CQ17RN3 349 aaKnown RBP17.81■□□□□ 0.44
CNKSR1-211ENST00000528001 EMILIN1Q9Y6C2 1016 aa17.8■□□□□ 0.44
CNKSR1-211ENST00000528001 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
CNKSR1-211ENST00000528001 DISP2A7MBM2 1401 aa17.8■□□□□ 0.44
CNKSR1-211ENST00000528001 MAP2P11137 1827 aaKnown RBP17.79■□□□□ 0.44
CNKSR1-211ENST00000528001 HSP90AB2PQ58FF8 381 aa17.78■□□□□ 0.44
CNKSR1-211ENST00000528001 WNK3Q9BYP7 1800 aa17.77■□□□□ 0.44
CNKSR1-211ENST00000528001 NCAPD2Q15021 1401 aa17.77■□□□□ 0.44
CNKSR1-211ENST00000528001 PLEKHG2Q9H7P9 1386 aa17.77■□□□□ 0.43
CNKSR1-211ENST00000528001 NLRP2Q9NX02 1062 aa17.76■□□□□ 0.43
CNKSR1-211ENST00000528001 USP35Q9P2H5 1018 aa17.76■□□□□ 0.43
CNKSR1-211ENST00000528001 CC2D1BQ5T0F9 858 aaKnown RBP17.75■□□□□ 0.43
CNKSR1-211ENST00000528001 KRT27Q7Z3Y8 459 aa17.75■□□□□ 0.43
CNKSR1-211ENST00000528001 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
CNKSR1-211ENST00000528001 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
CNKSR1-211ENST00000528001 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
CNKSR1-211ENST00000528001 IL2RBP14784 551 aa17.73■□□□□ 0.43
CNKSR1-211ENST00000528001 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
CNKSR1-211ENST00000528001 A0A0G2JS52 829 aa17.72■□□□□ 0.43
CNKSR1-211ENST00000528001 PPM1GO15355 546 aaPredicted RBP17.72■□□□□ 0.43
CNKSR1-211ENST00000528001 MYT1Q01538 1121 aa17.72■□□□□ 0.43
CNKSR1-211ENST00000528001 BCL9O00512 1426 aa17.72■□□□□ 0.43
CNKSR1-211ENST00000528001 PARD3Q8TEW0 1356 aa17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 DDB1Q16531 1140 aa17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 NBPF6Q5VWK0 638 aa17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 NBPF4Q96M43 638 aa17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
CNKSR1-211ENST00000528001 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
CNKSR1-211ENST00000528001 EIF4A2Q14240 407 aaKnown RBP17.7■□□□□ 0.42
CNKSR1-211ENST00000528001 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
CNKSR1-211ENST00000528001 MTHFSP49914 203 aa17.69■□□□□ 0.42
CNKSR1-211ENST00000528001 UPF1Q92900 1129 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNKSR1-211ENST00000528001 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
CNKSR1-211ENST00000528001 EXOC5O00471 708 aa17.68■□□□□ 0.42
CNKSR1-211ENST00000528001 RALBP1Q15311 655 aa17.68■□□□□ 0.42
CNKSR1-211ENST00000528001 FAM196AQ6ZSG2 479 aa17.68■□□□□ 0.42
CNKSR1-211ENST00000528001 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
CNKSR1-211ENST00000528001 EYA1Q99502 592 aa17.67■□□□□ 0.42
CNKSR1-211ENST00000528001 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
CNKSR1-211ENST00000528001 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
CNKSR1-211ENST00000528001 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
CNKSR1-211ENST00000528001 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 PPP2R1AP30153 589 aa17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 IL13P35225 146 aa17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 MEGF6O75095 1541 aa17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 KDRP35968 1356 aa17.65■□□□□ 0.42
CNKSR1-211ENST00000528001 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
CNKSR1-211ENST00000528001 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
CNKSR1-211ENST00000528001 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
CNKSR1-211ENST00000528001 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
CNKSR1-211ENST00000528001 ZCRB1Q8TBF4 217 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms