RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
LINC00958-203ENST00000527945 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
LINC00958-203ENST00000527945 ZC3H6P61129 1189 aaKnown RBP12.83□□□□□ -0.36
LINC00958-203ENST00000527945 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
LINC00958-203ENST00000527945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00958-203ENST00000527945 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
LINC00958-203ENST00000527945 THSD7AQ9UPZ6 1657 aa12.82□□□□□ -0.36
LINC00958-203ENST00000527945 CAMTA1Q9Y6Y1 1673 aa12.82□□□□□ -0.36
LINC00958-203ENST00000527945 ABCC6O95255 1503 aa12.82□□□□□ -0.36
LINC00958-203ENST00000527945 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
LINC00958-203ENST00000527945 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
LINC00958-203ENST00000527945 CCDC9Q9Y3X0 531 aaKnown RBP12.81□□□□□ -0.36
LINC00958-203ENST00000527945 PEAK1Q9H792 1746 aa12.81□□□□□ -0.36
LINC00958-203ENST00000527945 EVA1CP58658 441 aa12.8□□□□□ -0.36
LINC00958-203ENST00000527945 CHRNA2Q15822 529 aa12.8□□□□□ -0.36
LINC00958-203ENST00000527945 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
LINC00958-203ENST00000527945 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
LINC00958-203ENST00000527945 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
LINC00958-203ENST00000527945 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
LINC00958-203ENST00000527945 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
LINC00958-203ENST00000527945 TCP11L2Q8N4U5 519 aa12.78□□□□□ -0.36
LINC00958-203ENST00000527945 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
LINC00958-203ENST00000527945 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
LINC00958-203ENST00000527945 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
LINC00958-203ENST00000527945 POLR3GLQ9BT43 218 aa12.77□□□□□ -0.37
LINC00958-203ENST00000527945 FYB1O15117 783 aa12.76□□□□□ -0.37
LINC00958-203ENST00000527945 FBLN1P23142 703 aa12.76□□□□□ -0.37
LINC00958-203ENST00000527945 FAM196AQ6ZSG2 479 aa12.76□□□□□ -0.37
LINC00958-203ENST00000527945 COG3Q96JB2 828 aa12.76□□□□□ -0.37
LINC00958-203ENST00000527945 STRN4Q9NRL3 753 aa12.76□□□□□ -0.37
LINC00958-203ENST00000527945 BCL9O00512 1426 aa12.75□□□□□ -0.37
LINC00958-203ENST00000527945 MAP2P11137 1827 aaKnown RBP12.75□□□□□ -0.37
LINC00958-203ENST00000527945 CRB1P82279 1406 aa12.75□□□□□ -0.37
LINC00958-203ENST00000527945 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
LINC00958-203ENST00000527945 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 SOX12O15370 315 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
LINC00958-203ENST00000527945 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 PANK3Q9H999 370 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 AXIN2Q9Y2T1 843 aa12.74□□□□□ -0.37
LINC00958-203ENST00000527945 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
LINC00958-203ENST00000527945 BAG6P46379 1132 aa12.73□□□□□ -0.37
LINC00958-203ENST00000527945 CARD10Q9BWT7 1032 aa12.72□□□□□ -0.37
LINC00958-203ENST00000527945 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
LINC00958-203ENST00000527945 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
LINC00958-203ENST00000527945 TOM1L2Q6ZVM7 507 aa12.71□□□□□ -0.37
LINC00958-203ENST00000527945 IP6K1Q92551 441 aa12.71□□□□□ -0.37
LINC00958-203ENST00000527945 CAMKK2Q96RR4 588 aa12.71□□□□□ -0.37
LINC00958-203ENST00000527945 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
LINC00958-203ENST00000527945 A0A0G2JS52 829 aa12.7□□□□□ -0.38
LINC00958-203ENST00000527945 PER1O15534 1290 aaPredicted RBP12.7□□□□□ -0.38
LINC00958-203ENST00000527945 MYT1Q01538 1121 aa12.7□□□□□ -0.38
LINC00958-203ENST00000527945 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 ERBB3P21860 1342 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 MAP3K19Q56UN5 1328 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 ZBTB7CA1YPR0 619 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 AMER1Q5JTC6 1135 aaPredicted RBP12.69□□□□□ -0.38
LINC00958-203ENST00000527945 LRRC37A3O60309 1634 aa12.69□□□□□ -0.38
LINC00958-203ENST00000527945 PARP4Q9UKK3 1724 aaKnown RBP12.68□□□□□ -0.38
LINC00958-203ENST00000527945 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
LINC00958-203ENST00000527945 FAM182BQ5T319 152 aa12.68□□□□□ -0.38
LINC00958-203ENST00000527945 USP35Q9P2H5 1018 aa12.68□□□□□ -0.38
LINC00958-203ENST00000527945 SHANK3Q9BYB0 1731 aa12.68□□□□□ -0.38
LINC00958-203ENST00000527945 RRS1Q15050 365 aaKnown RBP12.67□□□□□ -0.38
LINC00958-203ENST00000527945 NSD2O96028 1365 aa12.67□□□□□ -0.38
LINC00958-203ENST00000527945 SMG6Q86US8 1419 aaKnown RBP12.66□□□□□ -0.38
LINC00958-203ENST00000527945 AMPHP49418 695 aa12.66□□□□□ -0.38
LINC00958-203ENST00000527945 EN1Q05925 392 aaPredicted RBP12.66□□□□□ -0.38
LINC00958-203ENST00000527945 OVOS2A0A0G2JMS6 1433 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 PLSCR1O15162 318 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 TRIM37O94972 964 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 HOXC9P31274 260 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
LINC00958-203ENST00000527945 DDB1Q16531 1140 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 ANKRD24Q8TF21 1146 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
LINC00958-203ENST00000527945 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
LINC00958-203ENST00000527945 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
LINC00958-203ENST00000527945 TNS1Q9HBL0 1735 aaKnown RBP12.64□□□□□ -0.39
LINC00958-203ENST00000527945 EXOC5O00471 708 aa12.63□□□□□ -0.39
LINC00958-203ENST00000527945 EZH2Q15910 746 aaKnown RBP12.63□□□□□ -0.39
LINC00958-203ENST00000527945 NLRP2Q9NX02 1062 aa12.63□□□□□ -0.39
LINC00958-203ENST00000527945 INSRP06213 1382 aa12.63□□□□□ -0.39
LINC00958-203ENST00000527945 FLT4P35916 1363 aa12.63□□□□□ -0.39
LINC00958-203ENST00000527945 APBA3O96018 575 aa12.62□□□□□ -0.39
LINC00958-203ENST00000527945 IL2RBP14784 551 aa12.62□□□□□ -0.39
LINC00958-203ENST00000527945 MARCH10Q8NA82 808 aaPredicted RBP12.62□□□□□ -0.39
LINC00958-203ENST00000527945 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
LINC00958-203ENST00000527945 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
LINC00958-203ENST00000527945 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
LINC00958-203ENST00000527945 NPC1L1Q9UHC9 1359 aa12.61□□□□□ -0.39
LINC00958-203ENST00000527945 SBF2Q86WG5 1849 aa12.61□□□□□ -0.39
LINC00958-203ENST00000527945 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
LINC00958-203ENST00000527945 LRP5O75197 1615 aa12.61□□□□□ -0.39
LINC00958-203ENST00000527945 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
LINC00958-203ENST00000527945 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
LINC00958-203ENST00000527945 TNS2Q63HR2 1409 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms