RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 CRB1P82279 1406 aa46.26■■■■■ 5
SSSCA1-205ENST00000527920 ANKRD36BQ8N2N9 1353 aa46.25■■■■■ 4.99
SSSCA1-205ENST00000527920 ZRANB1Q9UGI0 708 aa46.25■■■■■ 4.99
SSSCA1-205ENST00000527920 USP35Q9P2H5 1018 aa46.23■■■■■ 4.99
SSSCA1-205ENST00000527920 OVOS2A0A0J9YW53 1432 aa46.21■■■■■ 4.99
SSSCA1-205ENST00000527920 OVOS2Q6IE36 1432 aa46.21■■■■■ 4.99
SSSCA1-205ENST00000527920 AXIN2Q9Y2T1 843 aa46.21■■■■■ 4.99
SSSCA1-205ENST00000527920 SOX12O15370 315 aa46.2■■■■■ 4.99
SSSCA1-205ENST00000527920 WDR17Q8IZU2 1322 aa46.18■■■■■ 4.98
SSSCA1-205ENST00000527920 SF3B2Q13435 895 aaKnown RBP46.13■■■■■ 4.98
SSSCA1-205ENST00000527920 TOM1L2Q6ZVM7 507 aa46.1■■■■■ 4.97
SSSCA1-205ENST00000527920 PARP4Q9UKK3 1724 aaKnown RBP46.06■■■■■ 4.96
SSSCA1-205ENST00000527920 EIF4G2P78344 907 aaKnown RBP eCLIP46.04■■■■■ 4.96
SSSCA1-205ENST00000527920 PDE3BQ13370 1112 aa46.04■■■■■ 4.96
SSSCA1-205ENST00000527920 FAM196AQ6ZSG2 479 aa46.04■■■■■ 4.96
SSSCA1-205ENST00000527920 COG3Q96JB2 828 aa46.04■■■■■ 4.96
SSSCA1-205ENST00000527920 CARD10Q9BWT7 1032 aa46.04■■■■■ 4.96
SSSCA1-205ENST00000527920 FAM182BQ5T319 152 aa46.03■■■■■ 4.96
SSSCA1-205ENST00000527920 CSB-PGBD3P0DP91 1061 aa46.01■■■■■ 4.96
SSSCA1-205ENST00000527920 RGPD5Q99666 1765 aa46.01■■■■■ 4.96
SSSCA1-205ENST00000527920 CDCA7Q9BWT1 371 aaPredicted RBP46■■■■■ 4.95
SSSCA1-205ENST00000527920 MYOM1P52179 1685 aa45.99■■■■■ 4.95
SSSCA1-205ENST00000527920 LTN1O94822 1766 aa45.99■■■■■ 4.95
SSSCA1-205ENST00000527920 DEFB132Q7Z7B7 95 aa45.98■■■■■ 4.95
SSSCA1-205ENST00000527920 ERBB3P21860 1342 aa45.98■■■■■ 4.95
SSSCA1-205ENST00000527920 RGPD1P0DJD0 1748 aa45.97■■■■■ 4.95
SSSCA1-205ENST00000527920 CCDC7Q96M83 1385 aa45.96■■■■■ 4.95
SSSCA1-205ENST00000527920 BAG6P46379 1132 aa45.96■■■■■ 4.95
SSSCA1-205ENST00000527920 FYB1O15117 783 aa45.95■■■■■ 4.95
SSSCA1-205ENST00000527920 C11orf95C9JLR9 678 aaPredicted RBP45.94■■■■■ 4.94
SSSCA1-205ENST00000527920 DISP2A7MBM2 1401 aa45.94■■■■■ 4.94
SSSCA1-205ENST00000527920 HSPA5P11021 654 aaKnown RBP45.93■■■■■ 4.94
SSSCA1-205ENST00000527920 LRRC37A3O60309 1634 aa45.91■■■■■ 4.94
SSSCA1-205ENST00000527920 WNK3Q9BYP7 1800 aa45.91■■■■■ 4.94
SSSCA1-205ENST00000527920 IP6K1Q92551 441 aa45.9■■■■■ 4.94
SSSCA1-205ENST00000527920 DDB1Q16531 1140 aa45.89■■■■■ 4.94
SSSCA1-205ENST00000527920 CARD14Q9BXL6 1004 aa45.87■■■■■ 4.93
SSSCA1-205ENST00000527920 TNS1Q9HBL0 1735 aaKnown RBP45.86■■■■■ 4.93
SSSCA1-205ENST00000527920 ANKRD24Q8TF21 1146 aa45.86■■■■■ 4.93
SSSCA1-205ENST00000527920 GGNBP2Q9H3C7 697 aa45.86■■■■■ 4.93
SSSCA1-205ENST00000527920 MAP3K19Q56UN5 1328 aa45.85■■■■■ 4.93
SSSCA1-205ENST00000527920 OVOS2A0A0G2JMS6 1433 aa45.85■■■■■ 4.93
SSSCA1-205ENST00000527920 TRIM37O94972 964 aa45.83■■■■■ 4.93
SSSCA1-205ENST00000527920 NSD3Q9BZ95 1437 aa45.83■■■■■ 4.93
SSSCA1-205ENST00000527920 NLRP2Q9NX02 1062 aa45.82■■■■■ 4.93
SSSCA1-205ENST00000527920 RTL1A6NKG5 1358 aa45.81■■■■■ 4.92
SSSCA1-205ENST00000527920 KIF20BQ96Q89 1820 aa45.8■■■■■ 4.92
SSSCA1-205ENST00000527920 PEAK1Q9H792 1746 aa45.8■■■■■ 4.92
SSSCA1-205ENST00000527920 BCL9O00512 1426 aa45.77■■■■■ 4.92
SSSCA1-205ENST00000527920 HOXC9P31274 260 aa45.77■■■■■ 4.92
SSSCA1-205ENST00000527920 AMPHP49418 695 aa45.75■■■■■ 4.91
SSSCA1-205ENST00000527920 EN1Q05925 392 aaPredicted RBP45.75■■■■■ 4.91
SSSCA1-205ENST00000527920 FAM208AQ9UK61 1670 aaKnown RBP45.74■■■■■ 4.91
SSSCA1-205ENST00000527920 TNS2Q63HR2 1409 aa45.74■■■■■ 4.91
SSSCA1-205ENST00000527920 PARD3Q8TEW0 1356 aa45.73■■■■■ 4.91
SSSCA1-205ENST00000527920 FBLN1P23142 703 aa45.73■■■■■ 4.91
SSSCA1-205ENST00000527920 EXOC5O00471 708 aa45.72■■■■■ 4.91
SSSCA1-205ENST00000527920 CGNL1Q0VF96 1302 aa45.72■■■■■ 4.91
SSSCA1-205ENST00000527920 MARCH10Q8NA82 808 aaPredicted RBP45.71■■■■■ 4.91
SSSCA1-205ENST00000527920 KIF24Q5T7B8 1368 aa45.71■■■■■ 4.91
SSSCA1-205ENST00000527920 POLR3GLQ9BT43 218 aa45.7■■■■■ 4.91
SSSCA1-205ENST00000527920 APBA3O96018 575 aa45.69■■■■■ 4.9
SSSCA1-205ENST00000527920 IL2RBP14784 551 aa45.69■■■■■ 4.9
SSSCA1-205ENST00000527920 RRS1Q15050 365 aaKnown RBP45.69■■■■■ 4.9
SSSCA1-205ENST00000527920 CAMKK2Q96RR4 588 aa45.68■■■■■ 4.9
SSSCA1-205ENST00000527920 LTV1Q96GA3 475 aaPredicted RBP45.64■■■■■ 4.9
SSSCA1-205ENST00000527920 EZH2Q15910 746 aaKnown RBP45.62■■■■■ 4.89
SSSCA1-205ENST00000527920 FLT4P35916 1363 aa45.6■■■■■ 4.89
SSSCA1-205ENST00000527920 INSRP06213 1382 aa45.58■■■■■ 4.89
SSSCA1-205ENST00000527920 BCL11BQ9C0K0 894 aaPredicted RBP45.58■■■■■ 4.89
SSSCA1-205ENST00000527920 SBF2Q86WG5 1849 aa45.58■■■■■ 4.89
SSSCA1-205ENST00000527920 SMG6Q86US8 1419 aaKnown RBP45.57■■■■■ 4.89
SSSCA1-205ENST00000527920 PANK3Q9H999 370 aa45.55■■■■■ 4.88
SSSCA1-205ENST00000527920 RREB1Q92766 1687 aa45.5■■■■■ 4.88
SSSCA1-205ENST00000527920 PLSCR1O15162 318 aa45.5■■■■■ 4.87
SSSCA1-205ENST00000527920 HSP90AB2PQ58FF8 381 aa45.5■■■■■ 4.87
SSSCA1-205ENST00000527920 SRCAPQ6ZRS2 3230 aa45.49■■■■■ 4.87
SSSCA1-205ENST00000527920 RGPD3A6NKT7 1758 aaPredicted RBP45.49■■■■■ 4.87
SSSCA1-205ENST00000527920 RGPD4Q7Z3J3 1758 aa45.49■■■■■ 4.87
SSSCA1-205ENST00000527920 NSD2O96028 1365 aa45.48■■■■■ 4.87
SSSCA1-205ENST00000527920 EMILIN1Q9Y6C2 1016 aa45.48■■■■■ 4.87
SSSCA1-205ENST00000527920 ANKRD26Q9UPS8 1709 aa45.47■■■■■ 4.87
SSSCA1-205ENST00000527920 NBPF6Q5VWK0 638 aa45.46■■■■■ 4.87
SSSCA1-205ENST00000527920 NBPF4Q96M43 638 aa45.46■■■■■ 4.87
SSSCA1-205ENST00000527920 KIF7Q2M1P5 1343 aa45.44■■■■■ 4.86
SSSCA1-205ENST00000527920 PTF1AQ7RTS3 328 aa45.42■■■■■ 4.86
SSSCA1-205ENST00000527920 RGPD2P0DJD1 1756 aa45.41■■■■■ 4.86
SSSCA1-205ENST00000527920 WASHC2AQ641Q2 1341 aa45.41■■■■■ 4.86
SSSCA1-205ENST00000527920 MEGF6O75095 1541 aa45.4■■■■■ 4.86
SSSCA1-205ENST00000527920 NUP188Q5SRE5 1749 aa45.4■■■■■ 4.86
SSSCA1-205ENST00000527920 POLKQ9UBT6 870 aa45.39■■■■■ 4.86
SSSCA1-205ENST00000527920 NHSQ6T4R5 1651 aa45.38■■■■■ 4.86
SSSCA1-205ENST00000527920 PSDA5PKW4 1024 aaPredicted RBP45.38■■■■■ 4.86
SSSCA1-205ENST00000527920 R3HDM1Q15032 1099 aaKnown RBP45.35■■■■■ 4.85
SSSCA1-205ENST00000527920 ZCRB1Q8TBF4 217 aaKnown RBP45.34■■■■■ 4.85
SSSCA1-205ENST00000527920 PPM1GO15355 546 aaPredicted RBP45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 KCNQ2O43526 872 aa45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 NBPF14Q5TI25 921 aa45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 USHBP1Q8N6Y0 703 aa45.33■■■■■ 4.85
SSSCA1-205ENST00000527920 RAPGEF4Q8WZA2 1011 aa45.33■■■■■ 4.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms