RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 RXRBP28702 533 aa24.45■■□□□ 1.5
NXF1-206ENST00000527902 RBM6P78332 1123 aaKnown RBP24.45■■□□□ 1.5
NXF1-206ENST00000527902 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
NXF1-206ENST00000527902 GJD4Q96KN9 370 aaPredicted RBP24.44■■□□□ 1.5
NXF1-206ENST00000527902 STRN4Q9NRL3 753 aa24.44■■□□□ 1.5
NXF1-206ENST00000527902 MAP2P11137 1827 aaKnown RBP24.44■■□□□ 1.5
NXF1-206ENST00000527902 MAP3K19Q56UN5 1328 aa24.43■■□□□ 1.5
NXF1-206ENST00000527902 AMER1Q5JTC6 1135 aaPredicted RBP24.43■■□□□ 1.5
NXF1-206ENST00000527902 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
NXF1-206ENST00000527902 RGS12O14924 1447 aa24.42■■□□□ 1.5
NXF1-206ENST00000527902 NSD2O96028 1365 aa24.42■■□□□ 1.5
NXF1-206ENST00000527902 CDK12Q9NYV4 1490 aaPredicted RBP24.41■■□□□ 1.5
NXF1-206ENST00000527902 RRS1Q15050 365 aaKnown RBP24.41■■□□□ 1.5
NXF1-206ENST00000527902 SPATA31A5Q5VU36 1347 aa24.4■■□□□ 1.5
NXF1-206ENST00000527902 SPATA31A7Q8IWB4 1347 aa24.4■■□□□ 1.5
NXF1-206ENST00000527902 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
NXF1-206ENST00000527902 CCDC9Q9Y3X0 531 aaKnown RBP24.4■■□□□ 1.5
NXF1-206ENST00000527902 EVA1CP58658 441 aa24.38■■□□□ 1.49
NXF1-206ENST00000527902 BRWD3Q6RI45 1802 aa24.37■■□□□ 1.49
NXF1-206ENST00000527902 SPATA31A1Q5TZJ5 1347 aa24.36■■□□□ 1.49
NXF1-206ENST00000527902 IP6K1Q92551 441 aa24.36■■□□□ 1.49
NXF1-206ENST00000527902 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
NXF1-206ENST00000527902 RGPD2P0DJD1 1756 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 HOXC9P31274 260 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 TNNT2P45379 298 aaPredicted RBP24.35■■□□□ 1.49
NXF1-206ENST00000527902 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 WNK3Q9BYP7 1800 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 CRB1P82279 1406 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
NXF1-206ENST00000527902 THSD7AQ9UPZ6 1657 aa24.34■■□□□ 1.49
NXF1-206ENST00000527902 RTL1A6NKG5 1358 aa24.34■■□□□ 1.49
NXF1-206ENST00000527902 ERBB3P21860 1342 aa24.34■■□□□ 1.49
NXF1-206ENST00000527902 AMPHP49418 695 aa24.33■■□□□ 1.49
NXF1-206ENST00000527902 NPC1L1Q9UHC9 1359 aa24.32■■□□□ 1.48
NXF1-206ENST00000527902 FAM208AQ9UK61 1670 aaKnown RBP24.32■■□□□ 1.48
NXF1-206ENST00000527902 CC2D1BQ5T0F9 858 aaKnown RBP24.32■■□□□ 1.48
NXF1-206ENST00000527902 MORC1Q86VD1 984 aa24.32■■□□□ 1.48
NXF1-206ENST00000527902 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
NXF1-206ENST00000527902 FAM98CQ17RN3 349 aaKnown RBP24.31■■□□□ 1.48
NXF1-206ENST00000527902 POLKQ9UBT6 870 aa24.31■■□□□ 1.48
NXF1-206ENST00000527902 ONECUT3O60422 494 aaPredicted RBP24.3■■□□□ 1.48
NXF1-206ENST00000527902 TOM1L2Q6ZVM7 507 aa24.3■■□□□ 1.48
NXF1-206ENST00000527902 ANKRD24Q8TF21 1146 aa24.3■■□□□ 1.48
NXF1-206ENST00000527902 FLT4P35916 1363 aa24.29■■□□□ 1.48
NXF1-206ENST00000527902 KIF24Q5T7B8 1368 aa24.29■■□□□ 1.48
NXF1-206ENST00000527902 CSB-PGBD3P0DP91 1061 aa24.29■■□□□ 1.48
NXF1-206ENST00000527902 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
NXF1-206ENST00000527902 CNGB1Q14028 1251 aaPredicted RBP24.28■■□□□ 1.48
NXF1-206ENST00000527902 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
NXF1-206ENST00000527902 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
NXF1-206ENST00000527902 DDX10Q13206 875 aaKnown RBP24.27■■□□□ 1.48
NXF1-206ENST00000527902 SEPT12Q8IYM1 358 aa24.27■■□□□ 1.48
NXF1-206ENST00000527902 TCP11L2Q8N4U5 519 aa24.27■■□□□ 1.48
NXF1-206ENST00000527902 INSRP06213 1382 aa24.27■■□□□ 1.48
NXF1-206ENST00000527902 PPM1GO15355 546 aaPredicted RBP24.26■■□□□ 1.47
NXF1-206ENST00000527902 PARP4Q9UKK3 1724 aaKnown RBP24.26■■□□□ 1.47
NXF1-206ENST00000527902 BARGINQ6ZT62 677 aa24.25■■□□□ 1.47
NXF1-206ENST00000527902 CARD10Q9BWT7 1032 aa24.25■■□□□ 1.47
NXF1-206ENST00000527902 NLRP2Q9NX02 1062 aa24.23■■□□□ 1.47
NXF1-206ENST00000527902 THRAP3Q9Y2W1 955 aaKnown RBP24.23■■□□□ 1.47
NXF1-206ENST00000527902 LRRC37A3O60309 1634 aa24.23■■□□□ 1.47
NXF1-206ENST00000527902 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
NXF1-206ENST00000527902 A0A0G2JS52 829 aa24.21■■□□□ 1.47
NXF1-206ENST00000527902 ZNF316A6NFI3 1004 aaPredicted RBP24.21■■□□□ 1.47
NXF1-206ENST00000527902 MYT1Q01538 1121 aa24.21■■□□□ 1.47
NXF1-206ENST00000527902 EP400Q96L91 3159 aa24.21■■□□□ 1.47
NXF1-206ENST00000527902 NBPF6Q5VWK0 638 aa24.18■■□□□ 1.46
NXF1-206ENST00000527902 NBPF4Q96M43 638 aa24.18■■□□□ 1.46
NXF1-206ENST00000527902 SOCS7O14512 581 aa24.15■■□□□ 1.46
NXF1-206ENST00000527902 MTHFSP49914 203 aa24.15■■□□□ 1.46
NXF1-206ENST00000527902 EIF4A2Q14240 407 aaKnown RBP24.15■■□□□ 1.46
NXF1-206ENST00000527902 USHBP1Q8N6Y0 703 aa24.15■■□□□ 1.46
NXF1-206ENST00000527902 KRT27Q7Z3Y8 459 aa24.14■■□□□ 1.45
NXF1-206ENST00000527902 NCAPD2Q15021 1401 aa24.13■■□□□ 1.45
NXF1-206ENST00000527902 PARD3Q8TEW0 1356 aa24.13■■□□□ 1.45
NXF1-206ENST00000527902 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
NXF1-206ENST00000527902 MEGF6O75095 1541 aa24.12■■□□□ 1.45
NXF1-206ENST00000527902 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
NXF1-206ENST00000527902 SHANK3Q9BYB0 1731 aa24.12■■□□□ 1.45
NXF1-206ENST00000527902 COL3A1P02461 1466 aaPredicted RBP24.12■■□□□ 1.45
NXF1-206ENST00000527902 IL2RBP14784 551 aa24.1■■□□□ 1.45
NXF1-206ENST00000527902 EYA1Q99502 592 aa24.1■■□□□ 1.45
NXF1-206ENST00000527902 CDCA7Q9BWT1 371 aaPredicted RBP24.1■■□□□ 1.45
NXF1-206ENST00000527902 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
NXF1-206ENST00000527902 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
NXF1-206ENST00000527902 DDB1Q16531 1140 aa24.08■■□□□ 1.45
NXF1-206ENST00000527902 IL13P35225 146 aa24.06■■□□□ 1.44
NXF1-206ENST00000527902 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
NXF1-206ENST00000527902 OVOS2A0A0G2JMS6 1433 aa24.06■■□□□ 1.44
NXF1-206ENST00000527902 IGSF1Q8N6C5 1336 aa24.06■■□□□ 1.44
NXF1-206ENST00000527902 UPF1Q92900 1129 aaKnown RBP eCLIP24.05■■□□□ 1.44
NXF1-206ENST00000527902 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
NXF1-206ENST00000527902 PKD1L3Q7Z443 1732 aa24.04■■□□□ 1.44
NXF1-206ENST00000527902 MARCH10Q8NA82 808 aaPredicted RBP24.04■■□□□ 1.44
NXF1-206ENST00000527902 EXOC5O00471 708 aa24.03■■□□□ 1.44
NXF1-206ENST00000527902 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
NXF1-206ENST00000527902 AEBP1Q8IUX7 1158 aa24■■□□□ 1.43
NXF1-206ENST00000527902 RAPGEF4Q8WZA2 1011 aa24■■□□□ 1.43
NXF1-206ENST00000527902 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
NXF1-206ENST00000527902 RALBP1Q15311 655 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms