RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
CTNND1-217ENST00000527599 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
CTNND1-217ENST00000527599 CDV3Q9UKY7 258 aaKnown RBP16.56■□□□□ 0.24
CTNND1-217ENST00000527599 TBC1D2BQ9UPU7 963 aa16.56■□□□□ 0.24
CTNND1-217ENST00000527599 SNRPBP14678 240 aaKnown RBP16.55■□□□□ 0.24
CTNND1-217ENST00000527599 CCDC116Q8IYX3 515 aa16.55■□□□□ 0.24
CTNND1-217ENST00000527599 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
CTNND1-217ENST00000527599 INTS6LQ5JSJ4 861 aaKnown RBP16.54■□□□□ 0.24
CTNND1-217ENST00000527599 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
CTNND1-217ENST00000527599 TRIM47Q96LD4 638 aa16.53■□□□□ 0.24
CTNND1-217ENST00000527599 PPP1R26Q5T8A7 1209 aaPredicted RBP16.52■□□□□ 0.24
CTNND1-217ENST00000527599 MCM6Q14566 821 aa16.51■□□□□ 0.23
CTNND1-217ENST00000527599 APBB1O00213 710 aa16.5■□□□□ 0.23
CTNND1-217ENST00000527599 NR1H3Q13133 447 aa16.5■□□□□ 0.23
CTNND1-217ENST00000527599 ESPNB1AK53 854 aa16.49■□□□□ 0.23
CTNND1-217ENST00000527599 MRPL14Q6P1L8 145 aaKnown RBP16.49■□□□□ 0.23
CTNND1-217ENST00000527599 ZNF775Q96BV0 537 aaPredicted RBP16.49■□□□□ 0.23
CTNND1-217ENST00000527599 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
CTNND1-217ENST00000527599 IRF5Q13568 498 aa16.48■□□□□ 0.23
CTNND1-217ENST00000527599 TMEM132AQ24JP5 1023 aa16.48■□□□□ 0.23
CTNND1-217ENST00000527599 ZFP42Q96MM3 310 aa16.48■□□□□ 0.23
CTNND1-217ENST00000527599 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
CTNND1-217ENST00000527599 PCDHB9Q9Y5E1 797 aa16.48■□□□□ 0.23
CTNND1-217ENST00000527599 NBPF20Q3BBV1 942 aa16.47■□□□□ 0.23
CTNND1-217ENST00000527599 MEIOBQ8N635 442 aa16.46■□□□□ 0.23
CTNND1-217ENST00000527599 RAB15P59190 212 aa16.45■□□□□ 0.22
CTNND1-217ENST00000527599 PURBQ96QR8 312 aaKnown RBP16.45■□□□□ 0.22
CTNND1-217ENST00000527599 GDPD2Q9HCC8 539 aa16.45■□□□□ 0.22
CTNND1-217ENST00000527599 TMPRSS4Q9NRS4 437 aa16.45■□□□□ 0.22
CTNND1-217ENST00000527599 GIGYF1O75420 1035 aaPredicted RBP16.44■□□□□ 0.22
CTNND1-217ENST00000527599 CBLBQ13191 982 aa16.44■□□□□ 0.22
CTNND1-217ENST00000527599 ERVH48-1M5A8F1 160 aa16.43■□□□□ 0.22
CTNND1-217ENST00000527599 KIFC2Q96AC6 838 aa16.43■□□□□ 0.22
CTNND1-217ENST00000527599 DHX9Q08211 1270 aaKnown RBP16.41■□□□□ 0.22
CTNND1-217ENST00000527599 Q6ZVU0 165 aa16.41■□□□□ 0.22
CTNND1-217ENST00000527599 PGPEP1Q9NXJ5 209 aa16.41■□□□□ 0.22
CTNND1-217ENST00000527599 C6orf118Q5T5N4 469 aa16.39■□□□□ 0.21
CTNND1-217ENST00000527599 SCARF1Q14162 830 aa16.38■□□□□ 0.21
CTNND1-217ENST00000527599 LINC00528Q8N1L1 170 aa16.38■□□□□ 0.21
CTNND1-217ENST00000527599 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
CTNND1-217ENST00000527599 LILRA1O75019 489 aa16.37■□□□□ 0.21
CTNND1-217ENST00000527599 ABL2P42684 1182 aa16.36■□□□□ 0.21
CTNND1-217ENST00000527599 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
CTNND1-217ENST00000527599 PRM3Q9NNZ6 103 aa16.36■□□□□ 0.21
CTNND1-217ENST00000527599 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
CTNND1-217ENST00000527599 COG6Q9Y2V7 657 aa16.35■□□□□ 0.21
CTNND1-217ENST00000527599 POM121Q96HA1 1249 aa16.34■□□□□ 0.21
CTNND1-217ENST00000527599 SOBPA7XYQ1 873 aa16.33■□□□□ 0.2
CTNND1-217ENST00000527599 BMP2P12643 396 aa16.33■□□□□ 0.2
CTNND1-217ENST00000527599 VAC14Q08AM6 782 aa16.33■□□□□ 0.2
CTNND1-217ENST00000527599 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
CTNND1-217ENST00000527599 TSEN34Q9BSV6 310 aaKnown RBP16.33■□□□□ 0.2
CTNND1-217ENST00000527599 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
CTNND1-217ENST00000527599 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
CTNND1-217ENST00000527599 UPP2O95045 317 aa16.3■□□□□ 0.2
CTNND1-217ENST00000527599 KDF1Q8NAX2 398 aaPredicted RBP16.3■□□□□ 0.2
CTNND1-217ENST00000527599 CEP126Q9P2H0 1117 aa16.3■□□□□ 0.2
CTNND1-217ENST00000527599 CYLDQ9NQC7 956 aa16.29■□□□□ 0.2
CTNND1-217ENST00000527599 SOS2Q07890 1332 aaPredicted RBP16.28■□□□□ 0.2
CTNND1-217ENST00000527599 RELBQ01201 579 aa16.26■□□□□ 0.19
CTNND1-217ENST00000527599 LCE2AQ5TA79 106 aaPredicted RBP16.26■□□□□ 0.19
CTNND1-217ENST00000527599 SPINT1O43278 529 aa16.25■□□□□ 0.19
CTNND1-217ENST00000527599 FLIIQ13045 1269 aa16.25■□□□□ 0.19
CTNND1-217ENST00000527599 ADH1AP07327 375 aa16.24■□□□□ 0.19
CTNND1-217ENST00000527599 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
CTNND1-217ENST00000527599 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
CTNND1-217ENST00000527599 ZNF592Q92610 1267 aa16.24■□□□□ 0.19
CTNND1-217ENST00000527599 SCTRP47872 440 aa16.23■□□□□ 0.19
CTNND1-217ENST00000527599 EIF4G2P78344 907 aaKnown RBP eCLIP16.23■□□□□ 0.19
CTNND1-217ENST00000527599 TREML4Q6UXN2 200 aa16.23■□□□□ 0.19
CTNND1-217ENST00000527599 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
CTNND1-217ENST00000527599 DNMT3LQ9UJW3 386 aa16.23■□□□□ 0.19
CTNND1-217ENST00000527599 TSGA10IPQ3SY00 556 aa16.22■□□□□ 0.19
CTNND1-217ENST00000527599 LCE2CQ5TA81 110 aa16.22■□□□□ 0.19
CTNND1-217ENST00000527599 PHTF2Q8N3S3 785 aa16.22■□□□□ 0.19
CTNND1-217ENST00000527599 ZNF395Q9H8N7 513 aaPredicted RBP16.22■□□□□ 0.19
CTNND1-217ENST00000527599 PCDHB11Q9Y5F2 797 aa16.22■□□□□ 0.19
CTNND1-217ENST00000527599 ERVK-9P63128 1117 aa16.21■□□□□ 0.19
CTNND1-217ENST00000527599 WASHC4Q2M389 1173 aa16.21■□□□□ 0.19
CTNND1-217ENST00000527599 TERTO14746 1132 aaKnown RBP16.2■□□□□ 0.18
CTNND1-217ENST00000527599 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
CTNND1-217ENST00000527599 INSM2Q96T92 566 aaPredicted RBP16.2■□□□□ 0.18
CTNND1-217ENST00000527599 MAN1A2O60476 641 aa16.19■□□□□ 0.18
CTNND1-217ENST00000527599 PTGIRP43119 386 aa16.19■□□□□ 0.18
CTNND1-217ENST00000527599 CTSOP43234 321 aaPredicted RBP16.19■□□□□ 0.18
CTNND1-217ENST00000527599 CDCA7Q9BWT1 371 aaPredicted RBP16.19■□□□□ 0.18
CTNND1-217ENST00000527599 TTLL8A6PVC2 850 aa16.18■□□□□ 0.18
CTNND1-217ENST00000527599 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
CTNND1-217ENST00000527599 CC2D2BQ6DHV5 1058 aa16.17■□□□□ 0.18
CTNND1-217ENST00000527599 NXF1Q9UBU9 619 aaKnown RBP16.17■□□□□ 0.18
CTNND1-217ENST00000527599 FIGNL2A6NMB9 653 aa16.16■□□□□ 0.18
CTNND1-217ENST00000527599 VEGFBP49765 207 aa16.16■□□□□ 0.18
CTNND1-217ENST00000527599 WFS1O76024 890 aa16.14■□□□□ 0.17
CTNND1-217ENST00000527599 OSBPL3Q9H4L5 887 aa16.14■□□□□ 0.17
CTNND1-217ENST00000527599 ATP5J2-PTCD1G3V325 749 aa16.12■□□□□ 0.17
CTNND1-217ENST00000527599 RAD21O60216 631 aa16.12■□□□□ 0.17
CTNND1-217ENST00000527599 TRAK2O60296 914 aa16.12■□□□□ 0.17
CTNND1-217ENST00000527599 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
CTNND1-217ENST00000527599 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
CTNND1-217ENST00000527599 SEMA3FQ13275 785 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms