RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 HAP1P54257 671 aaPredicted RBP24.92■■□□□ 1.58
SMPD1-203ENST00000527275 NUDCQ9Y266 331 aa24.92■■□□□ 1.58
SMPD1-203ENST00000527275 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
SMPD1-203ENST00000527275 IL13P35225 146 aa24.91■■□□□ 1.58
SMPD1-203ENST00000527275 EIF4A2Q14240 407 aaKnown RBP24.91■■□□□ 1.58
SMPD1-203ENST00000527275 IP6K1Q92551 441 aa24.91■■□□□ 1.58
SMPD1-203ENST00000527275 NEFLP07196 543 aa24.9■■□□□ 1.58
SMPD1-203ENST00000527275 U2AF1L5P0DN76 240 aaPredicted RBP24.9■■□□□ 1.58
SMPD1-203ENST00000527275 U2AF1Q01081 240 aaKnown RBP eCLIP24.9■■□□□ 1.58
SMPD1-203ENST00000527275 RTL1A6NKG5 1358 aa24.9■■□□□ 1.58
SMPD1-203ENST00000527275 FKBP8Q14318 412 aa24.89■■□□□ 1.58
SMPD1-203ENST00000527275 KIAA0232Q92628 1395 aa24.89■■□□□ 1.58
SMPD1-203ENST00000527275 ABCA3Q99758 1704 aa24.88■■□□□ 1.57
SMPD1-203ENST00000527275 SENP3-EIF4A1A0A087X0R7 540 aa24.88■■□□□ 1.57
SMPD1-203ENST00000527275 AXIN2Q9Y2T1 843 aa24.88■■□□□ 1.57
SMPD1-203ENST00000527275 CPDO75976 1380 aa24.87■■□□□ 1.57
SMPD1-203ENST00000527275 CHRNA2Q15822 529 aa24.87■■□□□ 1.57
SMPD1-203ENST00000527275 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
SMPD1-203ENST00000527275 LTV1Q96GA3 475 aaPredicted RBP24.86■■□□□ 1.57
SMPD1-203ENST00000527275 PRDM11Q9NQV5 511 aa24.84■■□□□ 1.57
SMPD1-203ENST00000527275 CCDC146Q8IYE0 955 aa24.84■■□□□ 1.57
SMPD1-203ENST00000527275 HSPA1LP34931 641 aa24.83■■□□□ 1.57
SMPD1-203ENST00000527275 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
SMPD1-203ENST00000527275 HMOX1P09601 288 aa24.81■■□□□ 1.56
SMPD1-203ENST00000527275 COL18A1P39060 1754 aa24.81■■□□□ 1.56
SMPD1-203ENST00000527275 RGPD5Q99666 1765 aa24.8■■□□□ 1.56
SMPD1-203ENST00000527275 EYA1Q99502 592 aa24.8■■□□□ 1.56
SMPD1-203ENST00000527275 JCADQ9P266 1359 aa24.79■■□□□ 1.56
SMPD1-203ENST00000527275 FAM83GA6ND36 823 aa24.79■■□□□ 1.56
SMPD1-203ENST00000527275 FCHSD2O94868 740 aa24.78■■□□□ 1.56
SMPD1-203ENST00000527275 ANKRD24Q8TF21 1146 aa24.78■■□□□ 1.56
SMPD1-203ENST00000527275 ERBB3P21860 1342 aa24.77■■□□□ 1.56
SMPD1-203ENST00000527275 NUTM2BA6NNL0 878 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-203ENST00000527275 NUTM2EB1AL46 878 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-203ENST00000527275 SULT6B1Q6IMI4 303 aa24.77■■□□□ 1.56
SMPD1-203ENST00000527275 AEBP1Q8IUX7 1158 aa24.77■■□□□ 1.56
SMPD1-203ENST00000527275 NUTM2AQ8IVF1 878 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-203ENST00000527275 RGPD1P0DJD0 1748 aa24.77■■□□□ 1.56
SMPD1-203ENST00000527275 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
SMPD1-203ENST00000527275 SALL2Q9Y467 1007 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-203ENST00000527275 PLEKHF1Q96S99 279 aa24.76■■□□□ 1.55
SMPD1-203ENST00000527275 IGSF1Q8N6C5 1336 aa24.76■■□□□ 1.55
SMPD1-203ENST00000527275 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
SMPD1-203ENST00000527275 RUNDC1Q96C34 613 aa24.76■■□□□ 1.55
SMPD1-203ENST00000527275 ABCC6O95255 1503 aa24.76■■□□□ 1.55
SMPD1-203ENST00000527275 NBPF6Q5VWK0 638 aa24.75■■□□□ 1.55
SMPD1-203ENST00000527275 NBPF4Q96M43 638 aa24.75■■□□□ 1.55
SMPD1-203ENST00000527275 APAF1O14727 1248 aa24.74■■□□□ 1.55
SMPD1-203ENST00000527275 PRKAR2BP31323 418 aa24.74■■□□□ 1.55
SMPD1-203ENST00000527275 CAMTA1Q9Y6Y1 1673 aa24.74■■□□□ 1.55
SMPD1-203ENST00000527275 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
SMPD1-203ENST00000527275 USHBP1Q8N6Y0 703 aa24.72■■□□□ 1.55
SMPD1-203ENST00000527275 PNNQ9H307 717 aaKnown RBP24.72■■□□□ 1.55
SMPD1-203ENST00000527275 PDE3BQ13370 1112 aa24.71■■□□□ 1.55
SMPD1-203ENST00000527275 RGPD2P0DJD1 1756 aa24.71■■□□□ 1.55
SMPD1-203ENST00000527275 KDRP35968 1356 aa24.71■■□□□ 1.55
SMPD1-203ENST00000527275 TCP11L2Q8N4U5 519 aa24.71■■□□□ 1.55
SMPD1-203ENST00000527275 CSB-PGBD3P0DP91 1061 aa24.7■■□□□ 1.55
SMPD1-203ENST00000527275 PHACTR3Q96KR7 559 aa24.7■■□□□ 1.54
SMPD1-203ENST00000527275 BTG4Q9NY30 223 aa24.7■■□□□ 1.54
SMPD1-203ENST00000527275 MAPK8IP3Q9UPT6 1336 aa24.69■■□□□ 1.54
SMPD1-203ENST00000527275 COL5A2P05997 1499 aaPredicted RBP24.69■■□□□ 1.54
SMPD1-203ENST00000527275 NLRP2Q9NX02 1062 aa24.68■■□□□ 1.54
SMPD1-203ENST00000527275 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
SMPD1-203ENST00000527275 RRP7AQ9Y3A4 280 aaKnown RBP24.67■■□□□ 1.54
SMPD1-203ENST00000527275 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
SMPD1-203ENST00000527275 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
SMPD1-203ENST00000527275 STRN4Q9NRL3 753 aa24.67■■□□□ 1.54
SMPD1-203ENST00000527275 COL14A1Q05707 1796 aaKnown RBP24.67■■□□□ 1.54
SMPD1-203ENST00000527275 NEFMP07197 916 aa24.66■■□□□ 1.54
SMPD1-203ENST00000527275 WDR17Q8IZU2 1322 aa24.66■■□□□ 1.54
SMPD1-203ENST00000527275 EVA1CP58658 441 aa24.66■■□□□ 1.54
SMPD1-203ENST00000527275 IRX6P78412 446 aaPredicted RBP24.66■■□□□ 1.54
SMPD1-203ENST00000527275 LARP1Q6PKG0 1096 aaKnown RBP24.63■■□□□ 1.53
SMPD1-203ENST00000527275 TOM1L2Q6ZVM7 507 aa24.63■■□□□ 1.53
SMPD1-203ENST00000527275 NCAPD2Q15021 1401 aa24.63■■□□□ 1.53
SMPD1-203ENST00000527275 TMPOP42166 694 aaKnown RBP24.63■■□□□ 1.53
SMPD1-203ENST00000527275 LRP6O75581 1613 aa24.62■■□□□ 1.53
SMPD1-203ENST00000527275 CDCA7LQ96GN5 454 aa24.61■■□□□ 1.53
SMPD1-203ENST00000527275 FAM208AQ9UK61 1670 aaKnown RBP24.61■■□□□ 1.53
SMPD1-203ENST00000527275 ERICH6BQ5W0A0 696 aa24.6■■□□□ 1.53
SMPD1-203ENST00000527275 C8orf37Q96NL8 207 aa24.6■■□□□ 1.53
SMPD1-203ENST00000527275 PLCH1Q4KWH8 1693 aa24.59■■□□□ 1.53
SMPD1-203ENST00000527275 RIPK4P57078 832 aa24.59■■□□□ 1.53
SMPD1-203ENST00000527275 NGEFQ8N5V2 710 aa24.59■■□□□ 1.53
SMPD1-203ENST00000527275 NFE2L2Q16236 605 aa24.58■■□□□ 1.53
SMPD1-203ENST00000527275 NGLY1Q96IV0 654 aa24.58■■□□□ 1.53
SMPD1-203ENST00000527275 FBXO41Q8TF61 875 aa24.57■■□□□ 1.52
SMPD1-203ENST00000527275 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
SMPD1-203ENST00000527275 CARD10Q9BWT7 1032 aa24.57■■□□□ 1.52
SMPD1-203ENST00000527275 RNF123Q5XPI4 1314 aa24.57■■□□□ 1.52
SMPD1-203ENST00000527275 SLIT2O94813 1529 aa24.56■■□□□ 1.52
SMPD1-203ENST00000527275 WWC1Q8IX03 1113 aa24.56■■□□□ 1.52
SMPD1-203ENST00000527275 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
SMPD1-203ENST00000527275 CRB1P82279 1406 aa24.56■■□□□ 1.52
SMPD1-203ENST00000527275 ZNF521Q96K83 1311 aa24.55■■□□□ 1.52
SMPD1-203ENST00000527275 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
SMPD1-203ENST00000527275 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
SMPD1-203ENST00000527275 TRIM35Q9UPQ4 493 aa24.54■■□□□ 1.52
SMPD1-203ENST00000527275 CCDC27Q2M243 656 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms