RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
CAPN1-207ENST00000527189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN1-207ENST00000527189 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
CAPN1-207ENST00000527189 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
CAPN1-207ENST00000527189 DISP2A7MBM2 1401 aa18.85■□□□□ 0.61
CAPN1-207ENST00000527189 WDR17Q8IZU2 1322 aa18.85■□□□□ 0.61
CAPN1-207ENST00000527189 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
CAPN1-207ENST00000527189 COL18A1P39060 1754 aa18.85■□□□□ 0.61
CAPN1-207ENST00000527189 EDC4Q6P2E9 1401 aaKnown RBP18.84■□□□□ 0.61
CAPN1-207ENST00000527189 YY1P25490 414 aa18.84■□□□□ 0.61
CAPN1-207ENST00000527189 CDCA7Q9BWT1 371 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-207ENST00000527189 SOX12O15370 315 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 TRIM37O94972 964 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
CAPN1-207ENST00000527189 NME9Q86XW9 330 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 ABCC6O95255 1503 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 UTRNP46939 3433 aa18.82■□□□□ 0.6
CAPN1-207ENST00000527189 A0A1W2PP64 1363 aa18.81■□□□□ 0.6
CAPN1-207ENST00000527189 NFAT5O94916 1531 aa18.81■□□□□ 0.6
CAPN1-207ENST00000527189 TMF1P82094 1093 aa18.81■□□□□ 0.6
CAPN1-207ENST00000527189 R3HDM1Q15032 1099 aaKnown RBP18.81■□□□□ 0.6
CAPN1-207ENST00000527189 DDB1Q16531 1140 aa18.8■□□□□ 0.6
CAPN1-207ENST00000527189 PARP4Q9UKK3 1724 aaKnown RBP18.8■□□□□ 0.6
CAPN1-207ENST00000527189 USP54Q70EL1 1684 aa18.79■□□□□ 0.6
CAPN1-207ENST00000527189 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
CAPN1-207ENST00000527189 CDCA8Q53HL2 280 aa18.79■□□□□ 0.6
CAPN1-207ENST00000527189 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
CAPN1-207ENST00000527189 USP47Q96K76 1375 aa18.79■□□□□ 0.6
CAPN1-207ENST00000527189 APBA3O96018 575 aa18.78■□□□□ 0.6
CAPN1-207ENST00000527189 CAMKK2Q96RR4 588 aa18.78■□□□□ 0.6
CAPN1-207ENST00000527189 PCGF6Q9BYE7 350 aa18.77■□□□□ 0.6
CAPN1-207ENST00000527189 CCDC7Q96M83 1385 aa18.77■□□□□ 0.6
CAPN1-207ENST00000527189 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
CAPN1-207ENST00000527189 OVOS2A0A0G2JMS6 1433 aa18.75■□□□□ 0.59
CAPN1-207ENST00000527189 OVOS2A0A0J9YW53 1432 aa18.75■□□□□ 0.59
CAPN1-207ENST00000527189 OVOS2Q6IE36 1432 aa18.75■□□□□ 0.59
CAPN1-207ENST00000527189 ANKRD36BQ8N2N9 1353 aa18.75■□□□□ 0.59
CAPN1-207ENST00000527189 EXOC5O00471 708 aa18.74■□□□□ 0.59
CAPN1-207ENST00000527189 BCL9O00512 1426 aa18.74■□□□□ 0.59
CAPN1-207ENST00000527189 ERBB3P21860 1342 aa18.74■□□□□ 0.59
CAPN1-207ENST00000527189 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
CAPN1-207ENST00000527189 COG3Q96JB2 828 aa18.73■□□□□ 0.59
CAPN1-207ENST00000527189 IP6K1Q92551 441 aa18.72■□□□□ 0.59
CAPN1-207ENST00000527189 RREB1Q92766 1687 aa18.72■□□□□ 0.59
CAPN1-207ENST00000527189 LRRC37A3O60309 1634 aa18.71■□□□□ 0.58
CAPN1-207ENST00000527189 PLSCR1O15162 318 aa18.7■□□□□ 0.58
CAPN1-207ENST00000527189 NUP188Q5SRE5 1749 aa18.7■□□□□ 0.58
CAPN1-207ENST00000527189 MARCH10Q8NA82 808 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-207ENST00000527189 ANKRD24Q8TF21 1146 aa18.7■□□□□ 0.58
CAPN1-207ENST00000527189 BCL11BQ9C0K0 894 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-207ENST00000527189 NLRP2Q9NX02 1062 aa18.7■□□□□ 0.58
CAPN1-207ENST00000527189 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
CAPN1-207ENST00000527189 NBPF14Q5TI25 921 aa18.68■□□□□ 0.58
CAPN1-207ENST00000527189 LTN1O94822 1766 aa18.68■□□□□ 0.58
CAPN1-207ENST00000527189 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
CAPN1-207ENST00000527189 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
CAPN1-207ENST00000527189 FYB1O15117 783 aa18.67■□□□□ 0.58
CAPN1-207ENST00000527189 IL2RBP14784 551 aa18.67■□□□□ 0.58
CAPN1-207ENST00000527189 MAP3K19Q56UN5 1328 aa18.65■□□□□ 0.58
CAPN1-207ENST00000527189 HOXC9P31274 260 aa18.64■□□□□ 0.57
CAPN1-207ENST00000527189 AMPHP49418 695 aa18.64■□□□□ 0.57
CAPN1-207ENST00000527189 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-207ENST00000527189 TNS2Q63HR2 1409 aa18.64■□□□□ 0.57
CAPN1-207ENST00000527189 SBF2Q86WG5 1849 aa18.63■□□□□ 0.57
CAPN1-207ENST00000527189 IFFO2Q5TF58 517 aa18.62■□□□□ 0.57
CAPN1-207ENST00000527189 GGNBP2Q9H3C7 697 aa18.62■□□□□ 0.57
CAPN1-207ENST00000527189 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
CAPN1-207ENST00000527189 RGPD3A6NKT7 1758 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-207ENST00000527189 RGPD4Q7Z3J3 1758 aa18.6■□□□□ 0.57
CAPN1-207ENST00000527189 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
CAPN1-207ENST00000527189 FBLN1P23142 703 aa18.59■□□□□ 0.57
CAPN1-207ENST00000527189 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
CAPN1-207ENST00000527189 PTF1AQ7RTS3 328 aa18.59■□□□□ 0.57
CAPN1-207ENST00000527189 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-207ENST00000527189 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
CAPN1-207ENST00000527189 FAM208AQ9UK61 1670 aaKnown RBP18.59■□□□□ 0.57
CAPN1-207ENST00000527189 RRS1Q15050 365 aaKnown RBP18.57■□□□□ 0.56
CAPN1-207ENST00000527189 PROM2Q8N271 834 aa18.57■□□□□ 0.56
CAPN1-207ENST00000527189 KCNQ2O43526 872 aa18.55■□□□□ 0.56
CAPN1-207ENST00000527189 CHD4Q14839 1912 aa18.55■□□□□ 0.56
CAPN1-207ENST00000527189 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
CAPN1-207ENST00000527189 TXNRD1Q16881 649 aa18.54■□□□□ 0.56
CAPN1-207ENST00000527189 ZNF784Q8NCA9 323 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-207ENST00000527189 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
CAPN1-207ENST00000527189 INSRP06213 1382 aa18.54■□□□□ 0.56
CAPN1-207ENST00000527189 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
CAPN1-207ENST00000527189 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
CAPN1-207ENST00000527189 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
CAPN1-207ENST00000527189 MYOM1P52179 1685 aa18.53■□□□□ 0.56
CAPN1-207ENST00000527189 FLT4P35916 1363 aa18.53■□□□□ 0.56
CAPN1-207ENST00000527189 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
CAPN1-207ENST00000527189 NBPF6Q5VWK0 638 aa18.52■□□□□ 0.56
CAPN1-207ENST00000527189 ZCRB1Q8TBF4 217 aaKnown RBP18.52■□□□□ 0.56
CAPN1-207ENST00000527189 DDX54Q8TDD1 881 aaKnown RBP18.52■□□□□ 0.56
CAPN1-207ENST00000527189 NBPF4Q96M43 638 aa18.52■□□□□ 0.56
CAPN1-207ENST00000527189 CASZ1Q86V15 1759 aa18.52■□□□□ 0.55
CAPN1-207ENST00000527189 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
CAPN1-207ENST00000527189 NHSQ6T4R5 1651 aa18.51■□□□□ 0.55
CAPN1-207ENST00000527189 HSP90AB2PQ58FF8 381 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms