RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
VPS11-202ENST00000526829 A0A0U1RQG5 324 aaPredicted RBP15.09■□□□□ 0.01
VPS11-202ENST00000526829 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
VPS11-202ENST00000526829 STRN4Q9NRL3 753 aa15.09■□□□□ 0.01
VPS11-202ENST00000526829 RBM10P98175 930 aaKnown RBP15.09■□□□□ 0.01
VPS11-202ENST00000526829 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
VPS11-202ENST00000526829 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0
VPS11-202ENST00000526829 EN1Q05925 392 aaPredicted RBP15.08■□□□□ 0
VPS11-202ENST00000526829 CABP2Q9NPB3 220 aa15.08■□□□□ 0
VPS11-202ENST00000526829 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
VPS11-202ENST00000526829 ZMYND15Q9H091 742 aa15.07■□□□□ 0
VPS11-202ENST00000526829 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
VPS11-202ENST00000526829 NLRP13Q86W25 1043 aa15.07■□□□□ 0
VPS11-202ENST00000526829 RBM19Q9Y4C8 960 aaKnown RBP15.07■□□□□ 0
VPS11-202ENST00000526829 PSDA5PKW4 1024 aaPredicted RBP15.06■□□□□ 0
VPS11-202ENST00000526829 L3MBTL2Q969R5 705 aa15.06■□□□□ 0
VPS11-202ENST00000526829 SLIT3O75094 1523 aa15.06■□□□□ 0
VPS11-202ENST00000526829 USP6P35125 1406 aa15.06■□□□□ 0
VPS11-202ENST00000526829 GCP02774 474 aa15.05■□□□□ 0
VPS11-202ENST00000526829 EVA1CP58658 441 aa15.05■□□□□ 0
VPS11-202ENST00000526829 LARP1Q6PKG0 1096 aaKnown RBP15.05■□□□□ 0
VPS11-202ENST00000526829 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
VPS11-202ENST00000526829 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
VPS11-202ENST00000526829 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
VPS11-202ENST00000526829 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
VPS11-202ENST00000526829 CAMKK2Q96RR4 588 aa15.04■□□□□ -0
VPS11-202ENST00000526829 USP35Q9P2H5 1018 aa15.04■□□□□ -0
VPS11-202ENST00000526829 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
VPS11-202ENST00000526829 DEKP35659 375 aaKnown RBP15.04■□□□□ -0
VPS11-202ENST00000526829 CABP1Q9NZU7 370 aa15.04■□□□□ -0
VPS11-202ENST00000526829 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
VPS11-202ENST00000526829 PIK3C2AO00443 1686 aa15.03■□□□□ -0
VPS11-202ENST00000526829 TRIM37O94972 964 aa15.03■□□□□ -0
VPS11-202ENST00000526829 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
VPS11-202ENST00000526829 RREB1Q92766 1687 aa15.03■□□□□ -0
VPS11-202ENST00000526829 FKBP8Q14318 412 aa15.02■□□□□ -0
VPS11-202ENST00000526829 COL18A1P39060 1754 aa15.02□□□□□ -0.01
VPS11-202ENST00000526829 PDE3BQ13370 1112 aa15.02□□□□□ -0.01
VPS11-202ENST00000526829 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.02□□□□□ -0.01
VPS11-202ENST00000526829 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
VPS11-202ENST00000526829 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
VPS11-202ENST00000526829 CRB1P82279 1406 aa15.01□□□□□ -0.01
VPS11-202ENST00000526829 AKAP12Q02952 1782 aa15.01□□□□□ -0.01
VPS11-202ENST00000526829 NLRP6P59044 892 aa15□□□□□ -0.01
VPS11-202ENST00000526829 PLCB2Q00722 1185 aa15□□□□□ -0.01
VPS11-202ENST00000526829 R3HDM1Q15032 1099 aaKnown RBP15□□□□□ -0.01
VPS11-202ENST00000526829 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
VPS11-202ENST00000526829 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
VPS11-202ENST00000526829 APBA3O96018 575 aa15□□□□□ -0.01
VPS11-202ENST00000526829 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
VPS11-202ENST00000526829 WNK3Q9BYP7 1800 aa14.98□□□□□ -0.01
VPS11-202ENST00000526829 LRRC37A3O60309 1634 aa14.98□□□□□ -0.01
VPS11-202ENST00000526829 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
VPS11-202ENST00000526829 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
VPS11-202ENST00000526829 TTC21BQ7Z4L5 1316 aa14.96□□□□□ -0.01
VPS11-202ENST00000526829 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
VPS11-202ENST00000526829 CPSF1Q10570 1443 aaKnown RBP14.96□□□□□ -0.01
VPS11-202ENST00000526829 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.01
VPS11-202ENST00000526829 SBF2Q86WG5 1849 aa14.96□□□□□ -0.02
VPS11-202ENST00000526829 RGPD3A6NKT7 1758 aaPredicted RBP14.95□□□□□ -0.02
VPS11-202ENST00000526829 RGPD4Q7Z3J3 1758 aa14.95□□□□□ -0.02
VPS11-202ENST00000526829 OVOS2A0A0G2JMS6 1433 aa14.95□□□□□ -0.02
VPS11-202ENST00000526829 OVOS2A0A0J9YW53 1432 aa14.95□□□□□ -0.02
VPS11-202ENST00000526829 OVOS2Q6IE36 1432 aa14.95□□□□□ -0.02
VPS11-202ENST00000526829 TTC21AQ8NDW8 1320 aa14.95□□□□□ -0.02
VPS11-202ENST00000526829 ARHGEF25Q86VW2 580 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 SBNO2Q9Y2G9 1366 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 WDR17Q8IZU2 1322 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 NFAT5O94916 1531 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 AXIN2Q9Y2T1 843 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 RGPD5Q99666 1765 aa14.94□□□□□ -0.02
VPS11-202ENST00000526829 KCNH5Q8NCM2 988 aa14.93□□□□□ -0.02
VPS11-202ENST00000526829 ABCC6O95255 1503 aa14.93□□□□□ -0.02
VPS11-202ENST00000526829 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
VPS11-202ENST00000526829 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
VPS11-202ENST00000526829 BCL9O00512 1426 aa14.91□□□□□ -0.02
VPS11-202ENST00000526829 DDB1Q16531 1140 aa14.91□□□□□ -0.02
VPS11-202ENST00000526829 CDCA7Q9BWT1 371 aaPredicted RBP14.91□□□□□ -0.02
VPS11-202ENST00000526829 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
VPS11-202ENST00000526829 MSH5O43196 834 aa14.91□□□□□ -0.02
VPS11-202ENST00000526829 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
VPS11-202ENST00000526829 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
VPS11-202ENST00000526829 USP31Q70CQ4 1352 aa14.9□□□□□ -0.02
VPS11-202ENST00000526829 CD163L1Q9NR16 1453 aa14.89□□□□□ -0.03
VPS11-202ENST00000526829 PLSCR1O15162 318 aa14.89□□□□□ -0.03
VPS11-202ENST00000526829 CDK11BP21127 795 aaKnown RBP14.89□□□□□ -0.03
VPS11-202ENST00000526829 CARD10Q9BWT7 1032 aa14.89□□□□□ -0.03
VPS11-202ENST00000526829 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
VPS11-202ENST00000526829 MARCH10Q8NA82 808 aaPredicted RBP14.88□□□□□ -0.03
VPS11-202ENST00000526829 NAP1L5Q96NT1 182 aaPredicted RBP14.88□□□□□ -0.03
VPS11-202ENST00000526829 CCER2I3L3R5 266 aa14.87□□□□□ -0.03
VPS11-202ENST00000526829 CCDC7Q96M83 1385 aa14.87□□□□□ -0.03
VPS11-202ENST00000526829 SOX12O15370 315 aa14.86□□□□□ -0.03
VPS11-202ENST00000526829 PTF1AQ7RTS3 328 aa14.86□□□□□ -0.03
VPS11-202ENST00000526829 BCCIPQ9P287 314 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS11-202ENST00000526829 CARD11Q9BXL7 1154 aa14.85□□□□□ -0.03
VPS11-202ENST00000526829 CSB-PGBD3P0DP91 1061 aa14.85□□□□□ -0.03
VPS11-202ENST00000526829 LTN1O94822 1766 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms