RNA–Protein interactions for RNA: ENST00000526789.1

COMMD9-204, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-204ENST00000526789 PXDNQ92626 1479 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 SLIT2O94813 1529 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 KRT28Q7Z3Y7 464 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
COMMD9-204ENST00000526789 KIF1BO60333 1816 aa10.8□□□□□ -0.68
COMMD9-204ENST00000526789 IRX5P78411 483 aaPredicted RBP10.8□□□□□ -0.68
COMMD9-204ENST00000526789 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
COMMD9-204ENST00000526789 USP32Q8NFA0 1604 aa10.8□□□□□ -0.68
COMMD9-204ENST00000526789 NEXMIFQ5QGS0 1516 aa10.79□□□□□ -0.68
COMMD9-204ENST00000526789 EMP3P54852 163 aa10.79□□□□□ -0.68
COMMD9-204ENST00000526789 PSME1Q06323 249 aa10.79□□□□□ -0.68
COMMD9-204ENST00000526789 EZH2Q15910 746 aaKnown RBP10.79□□□□□ -0.68
COMMD9-204ENST00000526789 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
COMMD9-204ENST00000526789 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
COMMD9-204ENST00000526789 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
COMMD9-204ENST00000526789 SOX12O15370 315 aa10.78□□□□□ -0.68
COMMD9-204ENST00000526789 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
COMMD9-204ENST00000526789 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
COMMD9-204ENST00000526789 NAIPQ13075 1403 aa10.77□□□□□ -0.68
COMMD9-204ENST00000526789 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
COMMD9-204ENST00000526789 NLRP6P59044 892 aa10.77□□□□□ -0.69
COMMD9-204ENST00000526789 RGPD1P0DJD0 1748 aa10.77□□□□□ -0.69
COMMD9-204ENST00000526789 CLTCL1P53675 1640 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 CCDC144AA2RUR9 1427 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 TRIM37O94972 964 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 APBA3O96018 575 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 NBPF8Q3BBV2 869 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 CDC42BPGQ6DT37 1551 aa10.76□□□□□ -0.69
COMMD9-204ENST00000526789 POTEB3A0JP26 581 aa10.75□□□□□ -0.69
COMMD9-204ENST00000526789 FAM83GA6ND36 823 aa10.75□□□□□ -0.69
COMMD9-204ENST00000526789 ONECUT3O60422 494 aaPredicted RBP10.75□□□□□ -0.69
COMMD9-204ENST00000526789 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
COMMD9-204ENST00000526789 POTEBQ6S5H4 581 aa10.75□□□□□ -0.69
COMMD9-204ENST00000526789 PPP1R37O75864 691 aa10.74□□□□□ -0.69
COMMD9-204ENST00000526789 HS3ST6Q96QI5 342 aa10.74□□□□□ -0.69
COMMD9-204ENST00000526789 NWD2Q9ULI1 1742 aa10.74□□□□□ -0.69
COMMD9-204ENST00000526789 ROCK1Q13464 1354 aa10.74□□□□□ -0.69
COMMD9-204ENST00000526789 TNS3Q68CZ2 1445 aa10.74□□□□□ -0.69
COMMD9-204ENST00000526789 OCEL1Q9H607 264 aa10.73□□□□□ -0.69
COMMD9-204ENST00000526789 SPON1Q9HCB6 807 aa10.73□□□□□ -0.69
COMMD9-204ENST00000526789 KIF1AQ12756 1690 aa10.73□□□□□ -0.69
COMMD9-204ENST00000526789 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
COMMD9-204ENST00000526789 SAFB2Q14151 953 aaKnown RBP eCLIP10.72□□□□□ -0.69
COMMD9-204ENST00000526789 STRN4Q9NRL3 753 aa10.72□□□□□ -0.69
COMMD9-204ENST00000526789 USP35Q9P2H5 1018 aa10.72□□□□□ -0.69
COMMD9-204ENST00000526789 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
COMMD9-204ENST00000526789 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
COMMD9-204ENST00000526789 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
COMMD9-204ENST00000526789 RGL3Q3MIN7 710 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 RPGRIP1LQ68CZ1 1315 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 FAM196AQ6ZSG2 479 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
COMMD9-204ENST00000526789 PDE3BQ13370 1112 aa10.7□□□□□ -0.7
COMMD9-204ENST00000526789 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
COMMD9-204ENST00000526789 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
COMMD9-204ENST00000526789 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
COMMD9-204ENST00000526789 KCNQ2O43526 872 aa10.69□□□□□ -0.7
COMMD9-204ENST00000526789 RGPD8O14715 1765 aaPredicted RBP10.69□□□□□ -0.7
COMMD9-204ENST00000526789 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
COMMD9-204ENST00000526789 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
COMMD9-204ENST00000526789 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
COMMD9-204ENST00000526789 ZNF784Q8NCA9 323 aaPredicted RBP10.68□□□□□ -0.7
COMMD9-204ENST00000526789 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 SPATA31A7Q8IWB4 1347 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 EVA1CP58658 441 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
COMMD9-204ENST00000526789 PPLO60437 1756 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 ABCA3Q99758 1704 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 DISP2A7MBM2 1401 aa10.67□□□□□ -0.7
COMMD9-204ENST00000526789 SBNO1A3KN83 1393 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 GPRASP1Q5JY77 1395 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 NINLQ9Y2I6 1382 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 ADGRF5Q8IZF2 1346 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 POGKQ9P215 609 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 PRAG1Q86YV5 1406 aa10.66□□□□□ -0.7
COMMD9-204ENST00000526789 PARD3Q8TEW0 1356 aa10.65□□□□□ -0.7
COMMD9-204ENST00000526789 COL14A1Q05707 1796 aaKnown RBP10.65□□□□□ -0.7
COMMD9-204ENST00000526789 NRAPQ86VF7 1730 aa10.65□□□□□ -0.7
COMMD9-204ENST00000526789 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
COMMD9-204ENST00000526789 CHRNA2Q15822 529 aa10.65□□□□□ -0.7
COMMD9-204ENST00000526789 C1QTNF8P60827 252 aa10.63□□□□□ -0.71
COMMD9-204ENST00000526789 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
COMMD9-204ENST00000526789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
COMMD9-204ENST00000526789 RRBP1Q9P2E9 1410 aaKnown RBP10.63□□□□□ -0.71
COMMD9-204ENST00000526789 ABCC11Q96J66 1382 aa10.63□□□□□ -0.71
COMMD9-204ENST00000526789 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
COMMD9-204ENST00000526789 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
COMMD9-204ENST00000526789 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
COMMD9-204ENST00000526789 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
COMMD9-204ENST00000526789 PRAM1Q96QH2 718 aa10.62□□□□□ -0.71
COMMD9-204ENST00000526789 NUP188Q5SRE5 1749 aa10.61□□□□□ -0.71
COMMD9-204ENST00000526789 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
COMMD9-204ENST00000526789 ZBTB7CA1YPR0 619 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms