RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	SEPT12	Q8IYM1	358 aa		13.56	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	NSD3	Q9BZ95	1437 aa		13.56	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	STRN4	Q9NRL3	753 aa		13.55	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	KIF7	Q2M1P5	1343 aa		13.55	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	SOX12	O15370	315 aa		13.54	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	FAM98C	Q17RN3	349 aa	Known RBP	13.54	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	GGNBP2	Q9H3C7	697 aa		13.54	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	BARGIN	Q6ZT62	677 aa		13.53	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	CRB1	P82279	1406 aa		13.53	□□□□□ -0.24
PDE4DIP-223	ENST00000526664	COG3	Q96JB2	828 aa		13.52	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	CCDC9	Q9Y3X0	531 aa	Known RBP	13.52	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	MAP3K19	Q56UN5	1328 aa		13.52	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	WDR17	Q8IZU2	1322 aa		13.52	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	PEAK1	Q9H792	1746 aa		13.51	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	PANK3	Q9H999	370 aa		13.51	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	WNK3	Q9BYP7	1800 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	PARP4	Q9UKK3	1724 aa	Known RBP	13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	DISP2	A7MBM2	1401 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	ERBB3	P21860	1342 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	WASHC2A	Q641Q2	1341 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	ZBTB7C	A1YPR0	619 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	EVA1C	P58658	441 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	TCP11L2	Q8N4U5	519 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	IP6K1	Q92551	441 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	ANKRD26	Q9UPS8	1709 aa		13.5	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	CCDC7	Q96M83	1385 aa		13.49	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	PER1	O15534	1290 aa	Predicted RBP	13.49	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	THRAP3	Q9Y2W1	955 aa	Known RBP	13.49	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	BLM	P54132	1417 aa	Predicted RBP	13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	HOXC9	P31274	260 aa		13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	KRT27	Q7Z3Y8	459 aa		13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	POLR3GL	Q9BT43	218 aa		13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	CARD10	Q9BWT7	1032 aa		13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	USP35	Q9P2H5	1018 aa		13.48	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	LRRC37A3	O60309	1634 aa		13.47	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	RRS1	Q15050	365 aa	Known RBP	13.47	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	FAM208A	Q9UK61	1670 aa	Known RBP	13.47	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	CGNL1	Q0VF96	1302 aa		13.46	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	RGPD2	P0DJD1	1756 aa		13.46	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	TOM1L2	Q6ZVM7	507 aa		13.46	□□□□□ -0.25
PDE4DIP-223	ENST00000526664	MAP2	P11137	1827 aa	Known RBP	13.46	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	RTL1	A6NKG5	1358 aa		13.45	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.45	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	FAM182B	Q5T319	152 aa		13.45	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	ANKRD24	Q8TF21	1146 aa		13.45	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	KIF24	Q5T7B8	1368 aa		13.45	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	EMILIN1	Q9Y6C2	1016 aa		13.44	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	HSP90AB2P	Q58FF8	381 aa		13.43	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	POLK	Q9UBT6	870 aa		13.43	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	NSD2	O96028	1365 aa		13.43	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	INSR	P06213	1382 aa		13.43	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	FLT4	P35916	1363 aa		13.42	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	TNS1	Q9HBL0	1735 aa	Known RBP	13.42	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	NCAPD2	Q15021	1401 aa		13.41	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	SMG6	Q86US8	1419 aa	Known RBP	13.41	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	AMPH	P49418	695 aa		13.41	□□□□□ -0.26
PDE4DIP-223	ENST00000526664		A0A0G2JS52	829 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	CSB-PGBD3	P0DP91	1061 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	MYT1	Q01538	1121 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	NBPF6	Q5VWK0	638 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	CCDC125	Q86Z20	511 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	MARCH10	Q8NA82	808 aa	Predicted RBP	13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	NBPF4	Q96M43	638 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	NLRP2	Q9NX02	1062 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	SBF2	Q86WG5	1849 aa		13.4	□□□□□ -0.26
PDE4DIP-223	ENST00000526664	BCL9	O00512	1426 aa		13.39	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	NPC1L1	Q9UHC9	1359 aa		13.39	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	SHANK3	Q9BYB0	1731 aa		13.39	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	TNS2	Q63HR2	1409 aa		13.39	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	DDB1	Q16531	1140 aa		13.38	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	LTV1	Q96GA3	475 aa	Predicted RBP	13.38	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	KNSTRN	Q9Y448	316 aa		13.38	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	MEGF6	O75095	1541 aa		13.38	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	RGPD1	P0DJD0	1748 aa		13.37	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	IL2RB	P14784	551 aa		13.37	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	FAM196A	Q6ZSG2	479 aa		13.37	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	DEFB132	Q7Z7B7	95 aa		13.37	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	PDE3B	Q13370	1112 aa		13.36	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	PTF1A	Q7RTS3	328 aa		13.36	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	OVOS2	A0A0G2JMS6	1433 aa		13.36	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	TNNT2	P45379	298 aa	Predicted RBP	13.35	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	USHBP1	Q8N6Y0	703 aa		13.35	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	EXOC5	O00471	708 aa		13.34	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	TRIM37	O94972	964 aa		13.34	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	MORC1	Q86VD1	984 aa		13.34	□□□□□ -0.27
PDE4DIP-223	ENST00000526664	EIF4A2	Q14240	407 aa	Known RBP	13.33	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	EYA1	Q99502	592 aa		13.33	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	CAMKK2	Q96RR4	588 aa		13.32	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	PKD1L3	Q7Z443	1732 aa		13.31	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	PPM1G	O15355	546 aa	Predicted RBP	13.31	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	CC2D1B	Q5T0F9	858 aa	Known RBP	13.31	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	EN1	Q05925	392 aa	Predicted RBP	13.3	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	IGSF1	Q8N6C5	1336 aa		13.3	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	NHS	Q6T4R5	1651 aa		13.3	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	RREB1	Q92766	1687 aa		13.3	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	COL3A1	P02461	1466 aa	Predicted RBP	13.29	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	KCNQ2	O43526	872 aa		13.29	□□□□□ -0.28
PDE4DIP-223	ENST00000526664	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms