RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
SSSCA1-202ENST00000526433 SEPT12Q8IYM1 358 aa22.4■■□□□ 1.18
SSSCA1-202ENST00000526433 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
SSSCA1-202ENST00000526433 KIF7Q2M1P5 1343 aa22.39■■□□□ 1.18
SSSCA1-202ENST00000526433 FBLN1P23142 703 aa22.38■■□□□ 1.17
SSSCA1-202ENST00000526433 USP35Q9P2H5 1018 aa22.38■■□□□ 1.17
SSSCA1-202ENST00000526433 RGPD5Q99666 1765 aa22.38■■□□□ 1.17
SSSCA1-202ENST00000526433 COL5A2P05997 1499 aaPredicted RBP22.37■■□□□ 1.17
SSSCA1-202ENST00000526433 A0A0G2JS52 829 aa22.35■■□□□ 1.17
SSSCA1-202ENST00000526433 MYT1Q01538 1121 aa22.35■■□□□ 1.17
SSSCA1-202ENST00000526433 CGNL1Q0VF96 1302 aa22.34■■□□□ 1.17
SSSCA1-202ENST00000526433 KIF20BQ96Q89 1820 aa22.34■■□□□ 1.17
SSSCA1-202ENST00000526433 TCP11L2Q8N4U5 519 aa22.34■■□□□ 1.17
SSSCA1-202ENST00000526433 LTN1O94822 1766 aa22.34■■□□□ 1.17
SSSCA1-202ENST00000526433 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
SSSCA1-202ENST00000526433 WDR17Q8IZU2 1322 aa22.32■■□□□ 1.16
SSSCA1-202ENST00000526433 BRWD3Q6RI45 1802 aa22.32■■□□□ 1.16
SSSCA1-202ENST00000526433 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
SSSCA1-202ENST00000526433 BARGINQ6ZT62 677 aa22.32■■□□□ 1.16
SSSCA1-202ENST00000526433 IP6K1Q92551 441 aa22.32■■□□□ 1.16
SSSCA1-202ENST00000526433 UPF1Q92900 1129 aaKnown RBP eCLIP22.32■■□□□ 1.161e-7■■■■□ 23.9
SSSCA1-202ENST00000526433 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
SSSCA1-202ENST00000526433 CRB1P82279 1406 aa22.31■■□□□ 1.16
SSSCA1-202ENST00000526433 THRAP3Q9Y2W1 955 aaKnown RBP22.31■■□□□ 1.16
SSSCA1-202ENST00000526433 CCDC7Q96M83 1385 aa22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 AMPHP49418 695 aa22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 KRT27Q7Z3Y8 459 aa22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 ABCC6O95255 1503 aa22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
SSSCA1-202ENST00000526433 ANKRD24Q8TF21 1146 aa22.28■■□□□ 1.16
SSSCA1-202ENST00000526433 CARD10Q9BWT7 1032 aa22.28■■□□□ 1.16
SSSCA1-202ENST00000526433 KNSTRNQ9Y448 316 aa22.28■■□□□ 1.16
SSSCA1-202ENST00000526433 HOXC9P31274 260 aa22.27■■□□□ 1.16
SSSCA1-202ENST00000526433 ERBB3P21860 1342 aa22.26■■□□□ 1.15
SSSCA1-202ENST00000526433 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
SSSCA1-202ENST00000526433 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
SSSCA1-202ENST00000526433 THSD7AQ9UPZ6 1657 aa22.25■■□□□ 1.15
SSSCA1-202ENST00000526433 BLMP54132 1417 aaPredicted RBP22.24■■□□□ 1.15
SSSCA1-202ENST00000526433 PER1O15534 1290 aaPredicted RBP22.22■■□□□ 1.15
SSSCA1-202ENST00000526433 TNNT2P45379 298 aaPredicted RBP22.22■■□□□ 1.15
SSSCA1-202ENST00000526433 ZEB1P37275 1124 aaPredicted RBP22.21■■□□□ 1.15
SSSCA1-202ENST00000526433 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
SSSCA1-202ENST00000526433 FAM182BQ5T319 152 aa22.21■■□□□ 1.15
SSSCA1-202ENST00000526433 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
SSSCA1-202ENST00000526433 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
SSSCA1-202ENST00000526433 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 AMER1Q5JTC6 1135 aaPredicted RBP22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 CDCA7Q9BWT1 371 aaPredicted RBP22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 RTL1A6NKG5 1358 aa22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 NSD2O96028 1365 aa22.2■■□□□ 1.14
SSSCA1-202ENST00000526433 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
SSSCA1-202ENST00000526433 ANKRD26Q9UPS8 1709 aa22.19■■□□□ 1.14
SSSCA1-202ENST00000526433 KIF24Q5T7B8 1368 aa22.18■■□□□ 1.14
SSSCA1-202ENST00000526433 CCDC125Q86Z20 511 aa22.18■■□□□ 1.14
SSSCA1-202ENST00000526433 POLKQ9UBT6 870 aa22.18■■□□□ 1.14
SSSCA1-202ENST00000526433 FLT4P35916 1363 aa22.17■■□□□ 1.14
SSSCA1-202ENST00000526433 DDB1Q16531 1140 aa22.17■■□□□ 1.14
SSSCA1-202ENST00000526433 EP400Q96L91 3159 aa22.17■■□□□ 1.14
SSSCA1-202ENST00000526433 INSRP06213 1382 aa22.16■■□□□ 1.14
SSSCA1-202ENST00000526433 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
SSSCA1-202ENST00000526433 PARP4Q9UKK3 1724 aaKnown RBP22.15■■□□□ 1.14
SSSCA1-202ENST00000526433 EXOC5O00471 708 aa22.14■■□□□ 1.13
SSSCA1-202ENST00000526433 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
SSSCA1-202ENST00000526433 DISP2A7MBM2 1401 aa22.14■■□□□ 1.13
SSSCA1-202ENST00000526433 IL2RBP14784 551 aa22.13■■□□□ 1.13
SSSCA1-202ENST00000526433 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
SSSCA1-202ENST00000526433 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
SSSCA1-202ENST00000526433 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
SSSCA1-202ENST00000526433 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
SSSCA1-202ENST00000526433 WNK3Q9BYP7 1800 aa22.12■■□□□ 1.13
SSSCA1-202ENST00000526433 FAM208AQ9UK61 1670 aaKnown RBP22.11■■□□□ 1.13
SSSCA1-202ENST00000526433 SMG6Q86US8 1419 aaKnown RBP22.1■■□□□ 1.13
SSSCA1-202ENST00000526433 SF3B2Q13435 895 aaKnown RBP22.09■■□□□ 1.13
SSSCA1-202ENST00000526433 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
SSSCA1-202ENST00000526433 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
SSSCA1-202ENST00000526433 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
SSSCA1-202ENST00000526433 LRRC37A3O60309 1634 aa22.08■■□□□ 1.13
SSSCA1-202ENST00000526433 TRIM37O94972 964 aa22.07■■□□□ 1.12
SSSCA1-202ENST00000526433 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
SSSCA1-202ENST00000526433 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
SSSCA1-202ENST00000526433 DEFB132Q7Z7B7 95 aa22.04■■□□□ 1.12
SSSCA1-202ENST00000526433 EYA1Q99502 592 aa22.04■■□□□ 1.12
SSSCA1-202ENST00000526433 RAPGEF4Q8WZA2 1011 aa22.03■■□□□ 1.12
SSSCA1-202ENST00000526433 OVOS2A0A0G2JMS6 1433 aa22.03■■□□□ 1.12
SSSCA1-202ENST00000526433 TNS2Q63HR2 1409 aa22.03■■□□□ 1.12
SSSCA1-202ENST00000526433 MTHFSP49914 203 aa22.02■■□□□ 1.12
SSSCA1-202ENST00000526433 TATP17735 454 aaPredicted RBP22.01■■□□□ 1.11
SSSCA1-202ENST00000526433 BAG6P46379 1132 aa22.01■■□□□ 1.11
SSSCA1-202ENST00000526433 ZCRB1Q8TBF4 217 aaKnown RBP22.01■■□□□ 1.11
SSSCA1-202ENST00000526433 DDX54Q8TDD1 881 aaKnown RBP22■■□□□ 1.11
SSSCA1-202ENST00000526433 RGPD1P0DJD0 1748 aa22■■□□□ 1.11
SSSCA1-202ENST00000526433 KAT6BQ8WYB5 2073 aa21.99■■□□□ 1.11
SSSCA1-202ENST00000526433 APBA3O96018 575 aa21.99■■□□□ 1.11
SSSCA1-202ENST00000526433 MEGF6O75095 1541 aa21.99■■□□□ 1.11
SSSCA1-202ENST00000526433 EN1Q05925 392 aaPredicted RBP21.98■■□□□ 1.11
SSSCA1-202ENST00000526433 DDX10Q13206 875 aaKnown RBP21.98■■□□□ 1.11
SSSCA1-202ENST00000526433 SBF2Q86WG5 1849 aa21.98■■□□□ 1.11
SSSCA1-202ENST00000526433 BCL9O00512 1426 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms