RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 UPF1Q92900 1129 aaKnown RBP eCLIP31.08■■■□□ 2.57
CKLF-206ENST00000526149 COG3Q96JB2 828 aa31.06■■■□□ 2.56
CKLF-206ENST00000526149 GGNBP2Q9H3C7 697 aa31.06■■■□□ 2.56
CKLF-206ENST00000526149 NSD3Q9BZ95 1437 aa31.06■■■□□ 2.56
CKLF-206ENST00000526149 FBLN1P23142 703 aa31.03■■■□□ 2.56
CKLF-206ENST00000526149 USP35Q9P2H5 1018 aa31.03■■■□□ 2.56
CKLF-206ENST00000526149 BRWD3Q6RI45 1802 aa31.02■■■□□ 2.56
CKLF-206ENST00000526149 THSD7AQ9UPZ6 1657 aa31■■■□□ 2.55
CKLF-206ENST00000526149 KIF7Q2M1P5 1343 aa30.99■■■□□ 2.55
CKLF-206ENST00000526149 CRB1P82279 1406 aa30.99■■■□□ 2.55
CKLF-206ENST00000526149 ABCC6O95255 1503 aa30.99■■■□□ 2.55
CKLF-206ENST00000526149 RGPD5Q99666 1765 aa30.99■■■□□ 2.55
CKLF-206ENST00000526149 WDR17Q8IZU2 1322 aa30.98■■■□□ 2.55
CKLF-206ENST00000526149 BARGINQ6ZT62 677 aa30.98■■■□□ 2.55
CKLF-206ENST00000526149 TCP11L2Q8N4U5 519 aa30.98■■■□□ 2.55
CKLF-206ENST00000526149 PANK3Q9H999 370 aa30.98■■■□□ 2.55
CKLF-206ENST00000526149 A0A0G2JS52 829 aa30.97■■■□□ 2.55
CKLF-206ENST00000526149 MYT1Q01538 1121 aa30.97■■■□□ 2.55
CKLF-206ENST00000526149 KRT27Q7Z3Y8 459 aa30.96■■■□□ 2.55
CKLF-206ENST00000526149 LTN1O94822 1766 aa30.96■■■□□ 2.55
CKLF-206ENST00000526149 MAP3K19Q56UN5 1328 aa30.96■■■□□ 2.55
CKLF-206ENST00000526149 THRAP3Q9Y2W1 955 aaKnown RBP30.95■■■□□ 2.55
CKLF-206ENST00000526149 KIF20BQ96Q89 1820 aa30.95■■■□□ 2.55
CKLF-206ENST00000526149 TOM1L2Q6ZVM7 507 aa30.94■■■□□ 2.54
CKLF-206ENST00000526149 IP6K1Q92551 441 aa30.93■■■□□ 2.54
CKLF-206ENST00000526149 ERBB3P21860 1342 aa30.91■■■□□ 2.54
CKLF-206ENST00000526149 CGNL1Q0VF96 1302 aa30.91■■■□□ 2.54
CKLF-206ENST00000526149 CSB-PGBD3P0DP91 1061 aa30.9■■■□□ 2.54
CKLF-206ENST00000526149 RRS1Q15050 365 aaKnown RBP30.9■■■□□ 2.54
CKLF-206ENST00000526149 CARD10Q9BWT7 1032 aa30.89■■■□□ 2.54
CKLF-206ENST00000526149 ANKRD24Q8TF21 1146 aa30.88■■■□□ 2.53
CKLF-206ENST00000526149 HOXC9P31274 260 aa30.87■■■□□ 2.53
CKLF-206ENST00000526149 FAM182BQ5T319 152 aa30.87■■■□□ 2.53
CKLF-206ENST00000526149 EP400Q96L91 3159 aa30.87■■■□□ 2.53
CKLF-206ENST00000526149 BLMP54132 1417 aaPredicted RBP30.87■■■□□ 2.53
CKLF-206ENST00000526149 CCDC7Q96M83 1385 aa30.85■■■□□ 2.53
CKLF-206ENST00000526149 WASHC2AQ641Q2 1341 aa30.85■■■□□ 2.53
CKLF-206ENST00000526149 AMPHP49418 695 aa30.85■■■□□ 2.53
CKLF-206ENST00000526149 RTL1A6NKG5 1358 aa30.81■■■□□ 2.52
CKLF-206ENST00000526149 LTV1Q96GA3 475 aaPredicted RBP30.81■■■□□ 2.52
CKLF-206ENST00000526149 NLRP2Q9NX02 1062 aa30.81■■■□□ 2.52
CKLF-206ENST00000526149 DISP2A7MBM2 1401 aa30.81■■■□□ 2.52
CKLF-206ENST00000526149 PARP4Q9UKK3 1724 aaKnown RBP30.8■■■□□ 2.52
CKLF-206ENST00000526149 EMILIN1Q9Y6C2 1016 aa30.79■■■□□ 2.52
CKLF-206ENST00000526149 PEAK1Q9H792 1746 aa30.78■■■□□ 2.52
CKLF-206ENST00000526149 CCDC125Q86Z20 511 aa30.78■■■□□ 2.52
CKLF-206ENST00000526149 PDE3BQ13370 1112 aa30.77■■■□□ 2.52
CKLF-206ENST00000526149 WNK3Q9BYP7 1800 aa30.76■■■□□ 2.51
CKLF-206ENST00000526149 PER1O15534 1290 aaPredicted RBP30.76■■■□□ 2.51
CKLF-206ENST00000526149 HSP90AB2PQ58FF8 381 aa30.76■■■□□ 2.51
CKLF-206ENST00000526149 CDCA7Q9BWT1 371 aaPredicted RBP30.75■■■□□ 2.51
CKLF-206ENST00000526149 KNSTRNQ9Y448 316 aa30.75■■■□□ 2.51
CKLF-206ENST00000526149 ANKRD26Q9UPS8 1709 aa30.75■■■□□ 2.51
CKLF-206ENST00000526149 LRRC37A3O60309 1634 aa30.74■■■□□ 2.51
CKLF-206ENST00000526149 DDB1Q16531 1140 aa30.74■■■□□ 2.51
CKLF-206ENST00000526149 AMER1Q5JTC6 1135 aaPredicted RBP30.74■■■□□ 2.51
CKLF-206ENST00000526149 NSD2O96028 1365 aa30.74■■■□□ 2.51
CKLF-206ENST00000526149 KIF24Q5T7B8 1368 aa30.74■■■□□ 2.51
CKLF-206ENST00000526149 POLKQ9UBT6 870 aa30.73■■■□□ 2.51
CKLF-206ENST00000526149 INSRP06213 1382 aa30.73■■■□□ 2.51
CKLF-206ENST00000526149 FLT4P35916 1363 aa30.73■■■□□ 2.51
CKLF-206ENST00000526149 TNNT2P45379 298 aaPredicted RBP30.72■■■□□ 2.51
CKLF-206ENST00000526149 FAM196AQ6ZSG2 479 aa30.71■■■□□ 2.51
CKLF-206ENST00000526149 NBPF6Q5VWK0 638 aa30.69■■■□□ 2.5
CKLF-206ENST00000526149 NBPF4Q96M43 638 aa30.69■■■□□ 2.5
CKLF-206ENST00000526149 FAM208AQ9UK61 1670 aaKnown RBP30.68■■■□□ 2.5
CKLF-206ENST00000526149 IL2RBP14784 551 aa30.68■■■□□ 2.5
CKLF-206ENST00000526149 MARCH10Q8NA82 808 aaPredicted RBP30.68■■■□□ 2.5
CKLF-206ENST00000526149 PPM1GO15355 546 aaPredicted RBP30.67■■■□□ 2.5
CKLF-206ENST00000526149 MORC1Q86VD1 984 aa30.67■■■□□ 2.5
CKLF-206ENST00000526149 MAP2P11137 1827 aaKnown RBP30.66■■■□□ 2.5
CKLF-206ENST00000526149 EXOC5O00471 708 aa30.66■■■□□ 2.5
CKLF-206ENST00000526149 DEFB132Q7Z7B7 95 aa30.66■■■□□ 2.5
CKLF-206ENST00000526149 RGPD2P0DJD1 1756 aa30.66■■■□□ 2.5
CKLF-206ENST00000526149 TRIM37O94972 964 aa30.63■■■□□ 2.49
CKLF-206ENST00000526149 TNS2Q63HR2 1409 aa30.63■■■□□ 2.49
CKLF-206ENST00000526149 SF3B2Q13435 895 aaKnown RBP30.62■■■□□ 2.49
CKLF-206ENST00000526149 USHBP1Q8N6Y0 703 aa30.62■■■□□ 2.49
CKLF-206ENST00000526149 OVOS2A0A0G2JMS6 1433 aa30.62■■■□□ 2.49
CKLF-206ENST00000526149 SMG6Q86US8 1419 aaKnown RBP30.62■■■□□ 2.49
CKLF-206ENST00000526149 RGPD1P0DJD0 1748 aa30.59■■■□□ 2.49
CKLF-206ENST00000526149 TNS1Q9HBL0 1735 aaKnown RBP30.58■■■□□ 2.49
CKLF-206ENST00000526149 MEGF6O75095 1541 aa30.57■■■□□ 2.49
CKLF-206ENST00000526149 BCL9O00512 1426 aa30.57■■■□□ 2.48
CKLF-206ENST00000526149 CC2D1BQ5T0F9 858 aaKnown RBP30.57■■■□□ 2.48
CKLF-206ENST00000526149 NPC1L1Q9UHC9 1359 aa30.55■■■□□ 2.48
CKLF-206ENST00000526149 BAG6P46379 1132 aa30.55■■■□□ 2.48
CKLF-206ENST00000526149 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
CKLF-206ENST00000526149 PTF1AQ7RTS3 328 aa30.54■■■□□ 2.48
CKLF-206ENST00000526149 EYA1Q99502 592 aa30.54■■■□□ 2.48
CKLF-206ENST00000526149 NCAPD2Q15021 1401 aa30.54■■■□□ 2.48
CKLF-206ENST00000526149 EN1Q05925 392 aaPredicted RBP30.53■■■□□ 2.48
CKLF-206ENST00000526149 APBA3O96018 575 aa30.51■■■□□ 2.47
CKLF-206ENST00000526149 SBF2Q86WG5 1849 aa30.5■■■□□ 2.47
CKLF-206ENST00000526149 ZCRB1Q8TBF4 217 aaKnown RBP30.49■■■□□ 2.47
CKLF-206ENST00000526149 CAMKK2Q96RR4 588 aa30.49■■■□□ 2.47
CKLF-206ENST00000526149 CNGB1Q14028 1251 aaPredicted RBP30.48■■■□□ 2.47
CKLF-206ENST00000526149 DDX54Q8TDD1 881 aaKnown RBP30.48■■■□□ 2.47
CKLF-206ENST00000526149 RAPGEF4Q8WZA2 1011 aa30.48■■■□□ 2.47
CKLF-206ENST00000526149 TATP17735 454 aaPredicted RBP30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms