RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 NLRP6P59044 892 aa24.09■■□□□ 1.45
CCS-204ENST00000526066 TESK2Q96S53 571 aa24.09■■□□□ 1.45
CCS-204ENST00000526066 SPON1Q9HCB6 807 aa24.08■■□□□ 1.45
CCS-204ENST00000526066 TOM1L2Q6ZVM7 507 aa24.06■■□□□ 1.44
CCS-204ENST00000526066 USP6P35125 1406 aa24.06■■□□□ 1.44
CCS-204ENST00000526066 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
CCS-204ENST00000526066 DDB1Q16531 1140 aa24.05■■□□□ 1.44
CCS-204ENST00000526066 RGPD3A6NKT7 1758 aaPredicted RBP24.04■■□□□ 1.44
CCS-204ENST00000526066 RGPD4Q7Z3J3 1758 aa24.04■■□□□ 1.44
CCS-204ENST00000526066 YY1P25490 414 aa24.04■■□□□ 1.44
CCS-204ENST00000526066 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
CCS-204ENST00000526066 LRRC37A3O60309 1634 aa24.03■■□□□ 1.44
CCS-204ENST00000526066 SLIT3O75094 1523 aa24.03■■□□□ 1.44
CCS-204ENST00000526066 KCNQ2O43526 872 aa24.02■■□□□ 1.44
CCS-204ENST00000526066 EVC2Q86UK5 1308 aa24.02■■□□□ 1.44
CCS-204ENST00000526066 CDCA7Q9BWT1 371 aaPredicted RBP24.01■■□□□ 1.43
CCS-204ENST00000526066 TMF1P82094 1093 aa24■■□□□ 1.43
CCS-204ENST00000526066 PEAK1Q9H792 1746 aa24■■□□□ 1.43
CCS-204ENST00000526066 SBF2Q86WG5 1849 aa24■■□□□ 1.43
CCS-204ENST00000526066 NINLQ9Y2I6 1382 aa24■■□□□ 1.43
CCS-204ENST00000526066 AKAP12Q02952 1782 aa23.99■■□□□ 1.43
CCS-204ENST00000526066 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
CCS-204ENST00000526066 WNK3Q9BYP7 1800 aa23.98■■□□□ 1.43
CCS-204ENST00000526066 PLSCR1O15162 318 aa23.98■■□□□ 1.43
CCS-204ENST00000526066 CSB-PGBD3P0DP91 1061 aa23.98■■□□□ 1.43
CCS-204ENST00000526066 KCNH5Q8NCM2 988 aa23.98■■□□□ 1.43
CCS-204ENST00000526066 BCL11BQ9C0K0 894 aaPredicted RBP23.98■■□□□ 1.43
CCS-204ENST00000526066 WDR17Q8IZU2 1322 aa23.98■■□□□ 1.43
CCS-204ENST00000526066 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
CCS-204ENST00000526066 CDCA8Q53HL2 280 aa23.96■■□□□ 1.43
CCS-204ENST00000526066 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
CCS-204ENST00000526066 ZNF692Q9BU19 519 aaPredicted RBP23.95■■□□□ 1.42
CCS-204ENST00000526066 COL18A1P39060 1754 aa23.93■■□□□ 1.42
CCS-204ENST00000526066 SOX12O15370 315 aa23.93■■□□□ 1.42
CCS-204ENST00000526066 TTC21AQ8NDW8 1320 aa23.91■■□□□ 1.42
CCS-204ENST00000526066 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
CCS-204ENST00000526066 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
CCS-204ENST00000526066 CARD10Q9BWT7 1032 aa23.9■■□□□ 1.42
CCS-204ENST00000526066 AXIN2Q9Y2T1 843 aa23.9■■□□□ 1.42
CCS-204ENST00000526066 RGPD5Q99666 1765 aa23.9■■□□□ 1.42
CCS-204ENST00000526066 EXOC5O00471 708 aa23.89■■□□□ 1.41
CCS-204ENST00000526066 ARHGEF25Q86VW2 580 aa23.89■■□□□ 1.41
CCS-204ENST00000526066 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
CCS-204ENST00000526066 STK32BQ9NY57 414 aa23.89■■□□□ 1.41
CCS-204ENST00000526066 BCL9O00512 1426 aa23.89■■□□□ 1.41
CCS-204ENST00000526066 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
CCS-204ENST00000526066 CCDC7Q96M83 1385 aa23.88■■□□□ 1.41
CCS-204ENST00000526066 CASZ1Q86V15 1759 aa23.88■■□□□ 1.41
CCS-204ENST00000526066 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
CCS-204ENST00000526066 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
CCS-204ENST00000526066 WASHC2AQ641Q2 1341 aa23.85■■□□□ 1.41
CCS-204ENST00000526066 ABCC6O95255 1503 aa23.84■■□□□ 1.41
CCS-204ENST00000526066 ZBTB7AO95365 584 aa23.84■■□□□ 1.41
CCS-204ENST00000526066 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
CCS-204ENST00000526066 TXNRD1Q16881 649 aa23.83■■□□□ 1.41
CCS-204ENST00000526066 TNS2Q63HR2 1409 aa23.82■■□□□ 1.4
CCS-204ENST00000526066 NFAT5O94916 1531 aa23.81■■□□□ 1.4
CCS-204ENST00000526066 MYOM1P52179 1685 aa23.8■■□□□ 1.4
CCS-204ENST00000526066 MON2Q7Z3U7 1717 aa23.8■■□□□ 1.4
CCS-204ENST00000526066 PROM2Q8N271 834 aa23.8■■□□□ 1.4
CCS-204ENST00000526066 SLC15A2Q16348 729 aa23.79■■□□□ 1.4
CCS-204ENST00000526066 ATF5Q9Y2D1 282 aaPredicted RBP23.79■■□□□ 1.4
CCS-204ENST00000526066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.78■■□□□ 1.4
CCS-204ENST00000526066 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
CCS-204ENST00000526066 NHSQ6T4R5 1651 aa23.78■■□□□ 1.4
CCS-204ENST00000526066 POLR3GLQ9BT43 218 aa23.77■■□□□ 1.4
CCS-204ENST00000526066 PDGFDQ9GZP0 370 aaPredicted RBP23.77■■□□□ 1.4
CCS-204ENST00000526066 MTFR1LQ9H019 292 aa23.76■■□□□ 1.39
CCS-204ENST00000526066 LTN1O94822 1766 aa23.75■■□□□ 1.39
CCS-204ENST00000526066 IL2RBP14784 551 aa23.74■■□□□ 1.39
CCS-204ENST00000526066 PTGER2P43116 358 aa23.74■■□□□ 1.39
CCS-204ENST00000526066 HDGFL2Q7Z4V5 671 aaPredicted RBP23.74■■□□□ 1.39
CCS-204ENST00000526066 ERBB3P21860 1342 aa23.74■■□□□ 1.39
CCS-204ENST00000526066 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
CCS-204ENST00000526066 ACSBG1Q96GR2 724 aa23.73■■□□□ 1.39
CCS-204ENST00000526066 SLC12A5Q9H2X9 1139 aa23.73■■□□□ 1.39
CCS-204ENST00000526066 KAT6BQ8WYB5 2073 aa23.72■■□□□ 1.39
CCS-204ENST00000526066 FHDC1Q9C0D6 1143 aaPredicted RBP23.72■■□□□ 1.39
CCS-204ENST00000526066 USP31Q70CQ4 1352 aa23.72■■□□□ 1.39
CCS-204ENST00000526066 USP54Q70EL1 1684 aa23.72■■□□□ 1.39
CCS-204ENST00000526066 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 BTAF1O14981 1849 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 NME9Q86XW9 330 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 SYT17Q9BSW7 474 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
CCS-204ENST00000526066 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
CCS-204ENST00000526066 ARXQ96QS3 562 aa23.66■■□□□ 1.38
CCS-204ENST00000526066 EDC4Q6P2E9 1401 aaKnown RBP23.66■■□□□ 1.38
CCS-204ENST00000526066 ZNF784Q8NCA9 323 aaPredicted RBP23.65■■□□□ 1.38
CCS-204ENST00000526066 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
CCS-204ENST00000526066 CHD4Q14839 1912 aa23.65■■□□□ 1.38
CCS-204ENST00000526066 PAPPAQ13219 1627 aa23.64■■□□□ 1.38
CCS-204ENST00000526066 PANK3Q9H999 370 aa23.64■■□□□ 1.37
CCS-204ENST00000526066 FAM208AQ9UK61 1670 aaKnown RBP23.64■■□□□ 1.37
CCS-204ENST00000526066 DDX10Q13206 875 aaKnown RBP23.63■■□□□ 1.37
CCS-204ENST00000526066 SGIP1Q9BQI5 828 aa23.61■■□□□ 1.37
CCS-204ENST00000526066 POLD1P28340 1107 aa23.6■■□□□ 1.37
CCS-204ENST00000526066 SLC27A3Q5K4L6 730 aa23.6■■□□□ 1.37
CCS-204ENST00000526066 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms