RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 SLC24A1O60721 1099 aa10.55□□□□□ -0.72
CSDE1-210ENST00000525878 GMPRP36959 345 aa10.55□□□□□ -0.72
CSDE1-210ENST00000525878 ERBB4Q15303 1308 aa10.55□□□□□ -0.72
CSDE1-210ENST00000525878 AP1G2O75843 785 aa10.54□□□□□ -0.72
CSDE1-210ENST00000525878 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
CSDE1-210ENST00000525878 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
CSDE1-210ENST00000525878 LORP23490 312 aaPredicted RBP10.53□□□□□ -0.72
CSDE1-210ENST00000525878 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
CSDE1-210ENST00000525878 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
CSDE1-210ENST00000525878 SOS2Q07890 1332 aaPredicted RBP10.53□□□□□ -0.72
CSDE1-210ENST00000525878 UPP2O95045 317 aa10.52□□□□□ -0.73
CSDE1-210ENST00000525878 BMP2P12643 396 aa10.52□□□□□ -0.73
CSDE1-210ENST00000525878 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
CSDE1-210ENST00000525878 EPS8L1Q8TE68 723 aa10.52□□□□□ -0.73
CSDE1-210ENST00000525878 TSEN34Q9BSV6 310 aaKnown RBP10.52□□□□□ -0.73
CSDE1-210ENST00000525878 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
CSDE1-210ENST00000525878 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
CSDE1-210ENST00000525878 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
CSDE1-210ENST00000525878 RFC5P40937 340 aa10.51□□□□□ -0.73
CSDE1-210ENST00000525878 PTK2Q05397 1052 aa10.51□□□□□ -0.73
CSDE1-210ENST00000525878 Q6ZVU0 165 aa10.51□□□□□ -0.73
CSDE1-210ENST00000525878 KCTD15Q96SI1 283 aaPredicted RBP10.51□□□□□ -0.73
CSDE1-210ENST00000525878 MAN1A2O60476 641 aa10.5□□□□□ -0.73
CSDE1-210ENST00000525878 ZBTB33Q86T24 672 aa10.5□□□□□ -0.73
CSDE1-210ENST00000525878 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
CSDE1-210ENST00000525878 DNMT3LQ9UJW3 386 aa10.49□□□□□ -0.73
CSDE1-210ENST00000525878 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
CSDE1-210ENST00000525878 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
CSDE1-210ENST00000525878 ADAM32Q8TC27 787 aa10.48□□□□□ -0.73
CSDE1-210ENST00000525878 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
CSDE1-210ENST00000525878 CBLBQ13191 982 aa10.47□□□□□ -0.73
CSDE1-210ENST00000525878 DHX9Q08211 1270 aaKnown RBP10.46□□□□□ -0.73
CSDE1-210ENST00000525878 SPINT1O43278 529 aa10.45□□□□□ -0.74
CSDE1-210ENST00000525878 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
CSDE1-210ENST00000525878 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
CSDE1-210ENST00000525878 ZSCAN1Q8NBB4 408 aa10.44□□□□□ -0.74
CSDE1-210ENST00000525878 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
CSDE1-210ENST00000525878 TTLL8A6PVC2 850 aa10.43□□□□□ -0.74
CSDE1-210ENST00000525878 TMEM259Q4ZIN3 620 aa10.43□□□□□ -0.74
CSDE1-210ENST00000525878 PCMTD1Q96MG8 357 aaPredicted RBP10.43□□□□□ -0.74
CSDE1-210ENST00000525878 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.42□□□□□ -0.74
CSDE1-210ENST00000525878 NBPF20Q3BBV1 942 aa10.42□□□□□ -0.74
CSDE1-210ENST00000525878 ESPNB1AK53 854 aa10.41□□□□□ -0.74
CSDE1-210ENST00000525878 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
CSDE1-210ENST00000525878 GJD4Q96KN9 370 aaPredicted RBP10.39□□□□□ -0.75
CSDE1-210ENST00000525878 FAM181BA6NEQ2 426 aa10.38□□□□□ -0.75
CSDE1-210ENST00000525878 LILRA1O75019 489 aa10.38□□□□□ -0.75
CSDE1-210ENST00000525878 PTSQ03393 145 aa10.38□□□□□ -0.75
CSDE1-210ENST00000525878 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
CSDE1-210ENST00000525878 IL27Q8NEV9 243 aa10.38□□□□□ -0.75
CSDE1-210ENST00000525878 TMPRSS4Q9NRS4 437 aa10.38□□□□□ -0.75
CSDE1-210ENST00000525878 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-210ENST00000525878 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
CSDE1-210ENST00000525878 FIGNL2A6NMB9 653 aa10.36□□□□□ -0.75
CSDE1-210ENST00000525878 ERVH48-1M5A8F1 160 aa10.36□□□□□ -0.75
CSDE1-210ENST00000525878 BRPF1P55201 1214 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-210ENST00000525878 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
CSDE1-210ENST00000525878 CTSOP43234 321 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-210ENST00000525878 SEPT12Q8IYM1 358 aa10.35□□□□□ -0.75
CSDE1-210ENST00000525878 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-210ENST00000525878 SLC35F4A4IF30 521 aa10.34□□□□□ -0.75
CSDE1-210ENST00000525878 RELBQ01201 579 aa10.34□□□□□ -0.75
CSDE1-210ENST00000525878 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
CSDE1-210ENST00000525878 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
CSDE1-210ENST00000525878 ADH1AP07327 375 aa10.33□□□□□ -0.76
CSDE1-210ENST00000525878 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
CSDE1-210ENST00000525878 GPR161Q8N6U8 529 aaKnown RBP10.33□□□□□ -0.76
CSDE1-210ENST00000525878 INSM2Q96T92 566 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-210ENST00000525878 RNF217Q8TC41 542 aa10.32□□□□□ -0.76
CSDE1-210ENST00000525878 SOCS7O14512 581 aa10.31□□□□□ -0.76
CSDE1-210ENST00000525878 FBXO45P0C2W1 286 aa10.31□□□□□ -0.76
CSDE1-210ENST00000525878 RAB15P59190 212 aa10.31□□□□□ -0.76
CSDE1-210ENST00000525878 KRT76Q01546 638 aa10.31□□□□□ -0.76
CSDE1-210ENST00000525878 ZNF395Q9H8N7 513 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-210ENST00000525878 PTGIRP43119 386 aa10.3□□□□□ -0.76
CSDE1-210ENST00000525878 BANK1Q8NDB2 785 aa10.3□□□□□ -0.76
CSDE1-210ENST00000525878 GPR37L1O60883 481 aa10.29□□□□□ -0.76
CSDE1-210ENST00000525878 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-210ENST00000525878 POLMQ9NP87 494 aaPredicted RBP10.29□□□□□ -0.76
CSDE1-210ENST00000525878 GIGYF1O75420 1035 aaPredicted RBP10.28□□□□□ -0.76
CSDE1-210ENST00000525878 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
CSDE1-210ENST00000525878 ITGA6P23229 1130 aa10.26□□□□□ -0.77
CSDE1-210ENST00000525878 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
CSDE1-210ENST00000525878 PCDHB9Q9Y5E1 797 aa10.26□□□□□ -0.77
CSDE1-210ENST00000525878 MTMR14Q8NCE2 650 aa10.25□□□□□ -0.77
CSDE1-210ENST00000525878 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
CSDE1-210ENST00000525878 CYLDQ9NQC7 956 aa10.25□□□□□ -0.77
CSDE1-210ENST00000525878 NR1H3Q13133 447 aa10.24□□□□□ -0.77
CSDE1-210ENST00000525878 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
CSDE1-210ENST00000525878 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
CSDE1-210ENST00000525878 MCCD1P59942 119 aaPredicted RBP10.23□□□□□ -0.77
CSDE1-210ENST00000525878 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
CSDE1-210ENST00000525878 RNFT1Q5M7Z0 435 aa10.23□□□□□ -0.77
CSDE1-210ENST00000525878 CNTNAP3BQ96NU0 1288 aa10.23□□□□□ -0.77
CSDE1-210ENST00000525878 CNTNAP3Q9BZ76 1288 aa10.23□□□□□ -0.77
CSDE1-210ENST00000525878 LYSMD3Q7Z3D4 306 aa10.21□□□□□ -0.77
CSDE1-210ENST00000525878 VWA5B2Q8N398 1253 aa10.21□□□□□ -0.77
CSDE1-210ENST00000525878 ATP5J2-PTCD1G3V325 749 aa10.2□□□□□ -0.78
CSDE1-210ENST00000525878 RNF20Q5VTR2 975 aa10.2□□□□□ -0.78
CSDE1-210ENST00000525878 CC2D2BQ6DHV5 1058 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms