RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
CTTN-210ENST00000525852 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
CTTN-210ENST00000525852 CCDC9Q9Y3X0 531 aaKnown RBP16.99■□□□□ 0.31
CTTN-210ENST00000525852 LARP1Q6PKG0 1096 aaKnown RBP16.98■□□□□ 0.31
CTTN-210ENST00000525852 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
CTTN-210ENST00000525852 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
CTTN-210ENST00000525852 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
CTTN-210ENST00000525852 BRWD3Q6RI45 1802 aa16.96■□□□□ 0.31
CTTN-210ENST00000525852 SOCS7O14512 581 aa16.96■□□□□ 0.31
CTTN-210ENST00000525852 EVA1CP58658 441 aa16.95■□□□□ 0.3
CTTN-210ENST00000525852 ANKRD26Q9UPS8 1709 aa16.95■□□□□ 0.3
CTTN-210ENST00000525852 ABCC6O95255 1503 aa16.95■□□□□ 0.3
CTTN-210ENST00000525852 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
CTTN-210ENST00000525852 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
CTTN-210ENST00000525852 EP400Q96L91 3159 aa16.94■□□□□ 0.3
CTTN-210ENST00000525852 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
CTTN-210ENST00000525852 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
CTTN-210ENST00000525852 RRS1Q15050 365 aaKnown RBP16.93■□□□□ 0.3
CTTN-210ENST00000525852 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
CTTN-210ENST00000525852 PEAK1Q9H792 1746 aa16.92■□□□□ 0.3
CTTN-210ENST00000525852 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
CTTN-210ENST00000525852 PER1O15534 1290 aaPredicted RBP16.92■□□□□ 0.3
CTTN-210ENST00000525852 ONECUT3O60422 494 aaPredicted RBP16.92■□□□□ 0.3
CTTN-210ENST00000525852 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
CTTN-210ENST00000525852 CRB1P82279 1406 aa16.91■□□□□ 0.3
CTTN-210ENST00000525852 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
CTTN-210ENST00000525852 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
CTTN-210ENST00000525852 MAP2P11137 1827 aaKnown RBP16.9■□□□□ 0.3
CTTN-210ENST00000525852 ERBB3P21860 1342 aa16.89■□□□□ 0.29
CTTN-210ENST00000525852 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
CTTN-210ENST00000525852 IP6K1Q92551 441 aa16.89■□□□□ 0.29
CTTN-210ENST00000525852 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
CTTN-210ENST00000525852 A0A0G2JS52 829 aa16.88■□□□□ 0.29
CTTN-210ENST00000525852 HOXC9P31274 260 aa16.88■□□□□ 0.29
CTTN-210ENST00000525852 MYT1Q01538 1121 aa16.88■□□□□ 0.29
CTTN-210ENST00000525852 NSD2O96028 1365 aa16.88■□□□□ 0.29
CTTN-210ENST00000525852 RGPD2P0DJD1 1756 aa16.88■□□□□ 0.29
CTTN-210ENST00000525852 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
CTTN-210ENST00000525852 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
CTTN-210ENST00000525852 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
CTTN-210ENST00000525852 AMPHP49418 695 aa16.87■□□□□ 0.29
CTTN-210ENST00000525852 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
CTTN-210ENST00000525852 EMILIN1Q9Y6C2 1016 aa16.87■□□□□ 0.29
CTTN-210ENST00000525852 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
CTTN-210ENST00000525852 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
CTTN-210ENST00000525852 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
CTTN-210ENST00000525852 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
CTTN-210ENST00000525852 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
CTTN-210ENST00000525852 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
CTTN-210ENST00000525852 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
CTTN-210ENST00000525852 CARD10Q9BWT7 1032 aa16.84■□□□□ 0.29
CTTN-210ENST00000525852 LRRC37A3O60309 1634 aa16.83■□□□□ 0.29
CTTN-210ENST00000525852 FLT4P35916 1363 aa16.83■□□□□ 0.29
CTTN-210ENST00000525852 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
CTTN-210ENST00000525852 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
CTTN-210ENST00000525852 NLRP2Q9NX02 1062 aa16.83■□□□□ 0.28
CTTN-210ENST00000525852 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
CTTN-210ENST00000525852 THRAP3Q9Y2W1 955 aaKnown RBP16.83■□□□□ 0.28
CTTN-210ENST00000525852 DISP2A7MBM2 1401 aa16.82■□□□□ 0.28
CTTN-210ENST00000525852 PPM1GO15355 546 aaPredicted RBP16.82■□□□□ 0.28
CTTN-210ENST00000525852 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
CTTN-210ENST00000525852 KRT27Q7Z3Y8 459 aa16.82■□□□□ 0.28
CTTN-210ENST00000525852 KIF24Q5T7B8 1368 aa16.82■□□□□ 0.28
CTTN-210ENST00000525852 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
CTTN-210ENST00000525852 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTTN-210ENST00000525852 INSRP06213 1382 aa16.81■□□□□ 0.28
CTTN-210ENST00000525852 NPC1L1Q9UHC9 1359 aa16.81■□□□□ 0.28
CTTN-210ENST00000525852 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
CTTN-210ENST00000525852 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
CTTN-210ENST00000525852 NBPF6Q5VWK0 638 aa16.77■□□□□ 0.28
CTTN-210ENST00000525852 NBPF4Q96M43 638 aa16.77■□□□□ 0.28
CTTN-210ENST00000525852 USHBP1Q8N6Y0 703 aa16.76■□□□□ 0.27
CTTN-210ENST00000525852 MEGF6O75095 1541 aa16.75■□□□□ 0.27
CTTN-210ENST00000525852 IL2RBP14784 551 aa16.74■□□□□ 0.27
CTTN-210ENST00000525852 PDE3BQ13370 1112 aa16.74■□□□□ 0.27
CTTN-210ENST00000525852 DDB1Q16531 1140 aa16.74■□□□□ 0.27
CTTN-210ENST00000525852 TNS2Q63HR2 1409 aa16.74■□□□□ 0.27
CTTN-210ENST00000525852 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
CTTN-210ENST00000525852 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
CTTN-210ENST00000525852 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
CTTN-210ENST00000525852 MTHFSP49914 203 aa16.72■□□□□ 0.27
CTTN-210ENST00000525852 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
CTTN-210ENST00000525852 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
CTTN-210ENST00000525852 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
CTTN-210ENST00000525852 TNS1Q9HBL0 1735 aaKnown RBP16.71■□□□□ 0.27
CTTN-210ENST00000525852 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
CTTN-210ENST00000525852 EYA1Q99502 592 aa16.7■□□□□ 0.26
CTTN-210ENST00000525852 EXOC5O00471 708 aa16.69■□□□□ 0.26
CTTN-210ENST00000525852 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
CTTN-210ENST00000525852 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
CTTN-210ENST00000525852 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
CTTN-210ENST00000525852 TRIM37O94972 964 aa16.67■□□□□ 0.26
CTTN-210ENST00000525852 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
CTTN-210ENST00000525852 IL13P35225 146 aa16.67■□□□□ 0.26
CTTN-210ENST00000525852 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
CTTN-210ENST00000525852 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
CTTN-210ENST00000525852 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
CTTN-210ENST00000525852 PTF1AQ7RTS3 328 aa16.66■□□□□ 0.26
CTTN-210ENST00000525852 DEFB132Q7Z7B7 95 aa16.66■□□□□ 0.26
CTTN-210ENST00000525852 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms