RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 PRDM11Q9NQV5 511 aa21.2■□□□□ 0.98
TSPAN4-213ENST00000524895 WDR43Q15061 677 aaKnown RBP eCLIP21.19■□□□□ 0.98
TSPAN4-213ENST00000524895 PNISRQ8TF01 805 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-213ENST00000524895 BLMP54132 1417 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-213ENST00000524895 FBXO41Q8TF61 875 aa21.18■□□□□ 0.98
TSPAN4-213ENST00000524895 NUDCQ9Y266 331 aa21.18■□□□□ 0.98
TSPAN4-213ENST00000524895 NUTM2BA6NNL0 878 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 NUTM2EB1AL46 878 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 CHRNA2Q15822 529 aa21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 NUTM2AQ8IVF1 878 aaPredicted RBP21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 FAM9BQ8IZU0 186 aa21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 SPATA31A6Q5VVP1 1343 aa21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 COL18A1P39060 1754 aa21.17■□□□□ 0.98
TSPAN4-213ENST00000524895 COL14A1Q05707 1796 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-213ENST00000524895 LMO7Q8WWI1 1683 aa21.15■□□□□ 0.98
TSPAN4-213ENST00000524895 U2SURPO15042 1029 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-213ENST00000524895 EIF4A2Q14240 407 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-213ENST00000524895 ADAMTS2O95450 1211 aa21.14■□□□□ 0.97
TSPAN4-213ENST00000524895 IL13P35225 146 aa21.14■□□□□ 0.97
TSPAN4-213ENST00000524895 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.97
TSPAN4-213ENST00000524895 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
TSPAN4-213ENST00000524895 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-213ENST00000524895 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSPAN4-213ENST00000524895 AXIN2Q9Y2T1 843 aa21.12■□□□□ 0.97
TSPAN4-213ENST00000524895 ANKRD24Q8TF21 1146 aa21.11■□□□□ 0.97
TSPAN4-213ENST00000524895 LRP6O75581 1613 aa21.11■□□□□ 0.97
TSPAN4-213ENST00000524895 RGPD1P0DJD0 1748 aa21.1■□□□□ 0.97
TSPAN4-213ENST00000524895 PLCH1Q4KWH8 1693 aa21.1■□□□□ 0.97
TSPAN4-213ENST00000524895 CAMTA1Q9Y6Y1 1673 aa21.1■□□□□ 0.97
TSPAN4-213ENST00000524895 FAM83GA6ND36 823 aa21.1■□□□□ 0.97
TSPAN4-213ENST00000524895 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
TSPAN4-213ENST00000524895 ERBB3P21860 1342 aa21.09■□□□□ 0.97
TSPAN4-213ENST00000524895 FAM208AQ9UK61 1670 aaKnown RBP21.09■□□□□ 0.97
TSPAN4-213ENST00000524895 COL5A2P05997 1499 aaPredicted RBP21.08■□□□□ 0.97
TSPAN4-213ENST00000524895 CSB-PGBD3P0DP91 1061 aa21.07■□□□□ 0.96
TSPAN4-213ENST00000524895 BTG4Q9NY30 223 aa21.06■□□□□ 0.96
TSPAN4-213ENST00000524895 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
TSPAN4-213ENST00000524895 MEX3CQ5U5Q3 659 aaKnown RBP21.05■□□□□ 0.96
TSPAN4-213ENST00000524895 EYA1Q99502 592 aa21.05■□□□□ 0.96
TSPAN4-213ENST00000524895 NWD2Q9ULI1 1742 aa21.04■□□□□ 0.96
TSPAN4-213ENST00000524895 HMOX1P09601 288 aa21.04■□□□□ 0.96
TSPAN4-213ENST00000524895 EVA1CP58658 441 aa21.04■□□□□ 0.96
TSPAN4-213ENST00000524895 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
TSPAN4-213ENST00000524895 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
TSPAN4-213ENST00000524895 RGPD2P0DJD1 1756 aa21.03■□□□□ 0.96
TSPAN4-213ENST00000524895 SULT6B1Q6IMI4 303 aa21.03■□□□□ 0.96
TSPAN4-213ENST00000524895 STRN4Q9NRL3 753 aa21.03■□□□□ 0.96
TSPAN4-213ENST00000524895 NLRP2Q9NX02 1062 aa21.03■□□□□ 0.96
TSPAN4-213ENST00000524895 NRAPQ86VF7 1730 aa21.03■□□□□ 0.96
TSPAN4-213ENST00000524895 FCHSD2O94868 740 aa21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 NBPF6Q5VWK0 638 aa21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 CCDC146Q8IYE0 955 aa21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 NBPF4Q96M43 638 aa21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 PNNQ9H307 717 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 SLIT2O94813 1529 aa21.02■□□□□ 0.96
TSPAN4-213ENST00000524895 KDRP35968 1356 aa21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 AEBP1Q8IUX7 1158 aa21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 RSPH6AQ9H0K4 717 aa21.01■□□□□ 0.95
TSPAN4-213ENST00000524895 PRKAR2BP31323 418 aa21■□□□□ 0.95
TSPAN4-213ENST00000524895 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
TSPAN4-213ENST00000524895 NCAPD2Q15021 1401 aa21■□□□□ 0.95
TSPAN4-213ENST00000524895 NEFMP07197 916 aa20.99■□□□□ 0.95
TSPAN4-213ENST00000524895 RUNDC1Q96C34 613 aa20.99■□□□□ 0.95
TSPAN4-213ENST00000524895 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
TSPAN4-213ENST00000524895 CRB1P82279 1406 aa20.98■□□□□ 0.95
TSPAN4-213ENST00000524895 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-213ENST00000524895 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
TSPAN4-213ENST00000524895 PLEKHF1Q96S99 279 aa20.96■□□□□ 0.95
TSPAN4-213ENST00000524895 FNBP4Q8N3X1 1017 aaPredicted RBP20.95■□□□□ 0.94
TSPAN4-213ENST00000524895 CARD10Q9BWT7 1032 aa20.95■□□□□ 0.94
TSPAN4-213ENST00000524895 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.95■□□□□ 0.94
TSPAN4-213ENST00000524895 UNC5CLQ8IV45 518 aa20.94■□□□□ 0.94
TSPAN4-213ENST00000524895 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
TSPAN4-213ENST00000524895 APAF1O14727 1248 aa20.92■□□□□ 0.94
TSPAN4-213ENST00000524895 RAPGEF4Q8WZA2 1011 aa20.92■□□□□ 0.94
TSPAN4-213ENST00000524895 USP21Q9UK80 565 aa20.92■□□□□ 0.94
TSPAN4-213ENST00000524895 AFF2P51816 1311 aa20.92■□□□□ 0.94
TSPAN4-213ENST00000524895 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
TSPAN4-213ENST00000524895 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
TSPAN4-213ENST00000524895 PHACTR3Q96KR7 559 aa20.91■□□□□ 0.94
TSPAN4-213ENST00000524895 USP35Q9P2H5 1018 aa20.91■□□□□ 0.94
TSPAN4-213ENST00000524895 PARP4Q9UKK3 1724 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-213ENST00000524895 MEGF6O75095 1541 aa20.9■□□□□ 0.94
TSPAN4-213ENST00000524895 CCDC9Q9Y3X0 531 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-213ENST00000524895 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-213ENST00000524895 PLEKHG2Q9H7P9 1386 aa20.88■□□□□ 0.93
TSPAN4-213ENST00000524895 SPATA31A1Q5TZJ5 1347 aa20.88■□□□□ 0.93
TSPAN4-213ENST00000524895 VPS72Q15906 364 aa20.88■□□□□ 0.93
TSPAN4-213ENST00000524895 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-213ENST00000524895 WNK3Q9BYP7 1800 aa20.88■□□□□ 0.93
TSPAN4-213ENST00000524895 SPATA31A5Q5VU36 1347 aa20.87■□□□□ 0.93
TSPAN4-213ENST00000524895 SPATA31A7Q8IWB4 1347 aa20.87■□□□□ 0.93
TSPAN4-213ENST00000524895 NFE2L2Q16236 605 aa20.87■□□□□ 0.93
TSPAN4-213ENST00000524895 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-213ENST00000524895 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
TSPAN4-213ENST00000524895 IL2RBP14784 551 aa20.86■□□□□ 0.93
TSPAN4-213ENST00000524895 TMPOP42166 694 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms