RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 NBPF14Q5TI25 921 aa9.29□□□□□ -0.92
NUP98-213ENST00000524563 CCER1Q8TC90 406 aaPredicted RBP9.29□□□□□ -0.92
NUP98-213ENST00000524563 CABP2Q9NPB3 220 aa9.29□□□□□ -0.92
NUP98-213ENST00000524563 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
NUP98-213ENST00000524563 MYOM1P52179 1685 aa9.29□□□□□ -0.92
NUP98-213ENST00000524563 BTAF1O14981 1849 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
NUP98-213ENST00000524563 DCAF8L1A6NGE4 600 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 SOX12O15370 315 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
NUP98-213ENST00000524563 NLRP6P59044 892 aa9.27□□□□□ -0.93
NUP98-213ENST00000524563 TOM1L2Q6ZVM7 507 aa9.27□□□□□ -0.93
NUP98-213ENST00000524563 EVC2Q86UK5 1308 aa9.27□□□□□ -0.93
NUP98-213ENST00000524563 ABCC6O95255 1503 aa9.26□□□□□ -0.93
NUP98-213ENST00000524563 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
NUP98-213ENST00000524563 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
NUP98-213ENST00000524563 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
NUP98-213ENST00000524563 GCP02774 474 aa9.25□□□□□ -0.93
NUP98-213ENST00000524563 DDB1Q16531 1140 aa9.25□□□□□ -0.93
NUP98-213ENST00000524563 CAMKK2Q96RR4 588 aa9.25□□□□□ -0.93
NUP98-213ENST00000524563 NFAT5O94916 1531 aa9.25□□□□□ -0.93
NUP98-213ENST00000524563 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
NUP98-213ENST00000524563 AATKQ6ZMQ8 1374 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 KIF20BQ96Q89 1820 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 TUBGCP6Q96RT7 1819 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 TNS2Q63HR2 1409 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
NUP98-213ENST00000524563 CARD11Q9BXL7 1154 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 SPON1Q9HCB6 807 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 WDR17Q8IZU2 1322 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 KTN1Q86UP2 1357 aaKnown RBP9.23□□□□□ -0.93
NUP98-213ENST00000524563 SBNO2Q9Y2G9 1366 aa9.23□□□□□ -0.93
NUP98-213ENST00000524563 YY1P25490 414 aa9.22□□□□□ -0.93
NUP98-213ENST00000524563 BCL11BQ9C0K0 894 aaPredicted RBP9.22□□□□□ -0.93
NUP98-213ENST00000524563 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
NUP98-213ENST00000524563 KCNH5Q8NCM2 988 aa9.21□□□□□ -0.94
NUP98-213ENST00000524563 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.94
NUP98-213ENST00000524563 TTC21AQ8NDW8 1320 aa9.21□□□□□ -0.94
NUP98-213ENST00000524563 CCDC7Q96M83 1385 aa9.21□□□□□ -0.94
NUP98-213ENST00000524563 KCNQ2O43526 872 aa9.2□□□□□ -0.94
NUP98-213ENST00000524563 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
NUP98-213ENST00000524563 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
NUP98-213ENST00000524563 USP47Q96K76 1375 aa9.2□□□□□ -0.94
NUP98-213ENST00000524563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.19□□□□□ -0.94
NUP98-213ENST00000524563 PAPPAQ13219 1627 aa9.19□□□□□ -0.94
NUP98-213ENST00000524563 SHANK3Q9BYB0 1731 aa9.19□□□□□ -0.94
NUP98-213ENST00000524563 ADRA2BP18089 450 aa9.18□□□□□ -0.94
NUP98-213ENST00000524563 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
NUP98-213ENST00000524563 ANO8Q9HCE9 1232 aaPredicted RBP9.18□□□□□ -0.94
NUP98-213ENST00000524563 NLRP2Q9NX02 1062 aa9.18□□□□□ -0.94
NUP98-213ENST00000524563 ZBTB7AO95365 584 aa9.17□□□□□ -0.94
NUP98-213ENST00000524563 HDGFL2Q7Z4V5 671 aaPredicted RBP9.17□□□□□ -0.94
NUP98-213ENST00000524563 ZNF692Q9BU19 519 aaPredicted RBP9.17□□□□□ -0.94
NUP98-213ENST00000524563 LY75O60449 1722 aa9.17□□□□□ -0.94
NUP98-213ENST00000524563 CD163L1Q9NR16 1453 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 EDC4Q6P2E9 1401 aaKnown RBP9.16□□□□□ -0.94
NUP98-213ENST00000524563 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 EXOC5O00471 708 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 KLHL34Q8N239 644 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 TESK2Q96S53 571 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 CARD10Q9BWT7 1032 aa9.16□□□□□ -0.94
NUP98-213ENST00000524563 ERBB3P21860 1342 aa9.15□□□□□ -0.94
NUP98-213ENST00000524563 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
NUP98-213ENST00000524563 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
NUP98-213ENST00000524563 ACSBG1Q96GR2 724 aa9.15□□□□□ -0.94
NUP98-213ENST00000524563 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.94
NUP98-213ENST00000524563 C5P01031 1676 aa9.15□□□□□ -0.94
NUP98-213ENST00000524563 TAF1LQ8IZX4 1826 aa9.15□□□□□ -0.95
NUP98-213ENST00000524563 BCL9O00512 1426 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 PLSCR1O15162 318 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 IL2RBP14784 551 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 NME9Q86XW9 330 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 ATF5Q9Y2D1 282 aaPredicted RBP9.14□□□□□ -0.95
NUP98-213ENST00000524563 ITGB4P16144 1822 aa9.14□□□□□ -0.95
NUP98-213ENST00000524563 A0A1W2PP64 1363 aa9.13□□□□□ -0.95
NUP98-213ENST00000524563 PTF1AQ7RTS3 328 aa9.13□□□□□ -0.95
NUP98-213ENST00000524563 LTV1Q96GA3 475 aaPredicted RBP9.13□□□□□ -0.95
NUP98-213ENST00000524563 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
NUP98-213ENST00000524563 ANKRD26Q9UPS8 1709 aa9.13□□□□□ -0.95
NUP98-213ENST00000524563 SMG6Q86US8 1419 aaKnown RBP9.13□□□□□ -0.95
NUP98-213ENST00000524563 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
NUP98-213ENST00000524563 USP31Q70CQ4 1352 aa9.12□□□□□ -0.95
NUP98-213ENST00000524563 SLC15A2Q16348 729 aa9.11□□□□□ -0.95
NUP98-213ENST00000524563 PELP1Q8IZL8 1130 aaKnown RBP9.11□□□□□ -0.95
NUP98-213ENST00000524563 SYTL4Q96C24 671 aaPredicted RBP9.11□□□□□ -0.95
NUP98-213ENST00000524563 MTFR1LQ9H019 292 aa9.11□□□□□ -0.95
NUP98-213ENST00000524563 MAP2P11137 1827 aaKnown RBP9.1□□□□□ -0.95
NUP98-213ENST00000524563 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
NUP98-213ENST00000524563 PDGFDQ9GZP0 370 aaPredicted RBP9.1□□□□□ -0.95
NUP98-213ENST00000524563 COL24A1Q17RW2 1714 aa9.1□□□□□ -0.95
NUP98-213ENST00000524563 POLD1P28340 1107 aa9.09□□□□□ -0.95
NUP98-213ENST00000524563 AMPHP49418 695 aa9.09□□□□□ -0.95
NUP98-213ENST00000524563 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
NUP98-213ENST00000524563 COG3Q96JB2 828 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms