RNA–Protein interactions for RNA: ENST00000524154.1

SLC38A9-226, Transcript of solute carrier family 38 member 9, humanhuman

TSL 5

Gene SLC38A9, Length 470 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9-226ENST00000524154 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
SLC38A9-226ENST00000524154 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
SLC38A9-226ENST00000524154 USP17L5A8MUK1 530 aa9.73□□□□□ -0.85
SLC38A9-226ENST00000524154 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
SLC38A9-226ENST00000524154 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
SLC38A9-226ENST00000524154 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 CD2BP2O95400 341 aaKnown RBP9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 SKOR1P84550 965 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 MAP7D1Q3KQU3 841 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 PLPP7Q8NBV4 271 aa9.72□□□□□ -0.85
SLC38A9-226ENST00000524154 RNF20Q5VTR2 975 aa9.71□□□□□ -0.86
SLC38A9-226ENST00000524154 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
SLC38A9-226ENST00000524154 RETREG2Q8NC44 543 aa9.71□□□□□ -0.86
SLC38A9-226ENST00000524154 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
SLC38A9-226ENST00000524154 PDE4CQ08493 712 aa9.7□□□□□ -0.86
SLC38A9-226ENST00000524154 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
SLC38A9-226ENST00000524154 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
SLC38A9-226ENST00000524154 ESPNB1AK53 854 aa9.69□□□□□ -0.86
SLC38A9-226ENST00000524154 ATG7O95352 703 aa9.69□□□□□ -0.86
SLC38A9-226ENST00000524154 LAPTM4AQ15012 233 aa9.69□□□□□ -0.86
SLC38A9-226ENST00000524154 VRTNQ9H8Y1 702 aa9.69□□□□□ -0.86
SLC38A9-226ENST00000524154 GIGYF1O75420 1035 aaPredicted RBP9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 NCOA4Q13772 614 aa9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 LIAT1Q6ZQX7 453 aa9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
SLC38A9-226ENST00000524154 EML3Q32P44 896 aa9.67□□□□□ -0.86
SLC38A9-226ENST00000524154 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
SLC38A9-226ENST00000524154 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 MPNDQ8N594 471 aa9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 CCDC85AQ96PX6 553 aaPredicted RBP9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 KCTD15Q96SI1 283 aaPredicted RBP9.66□□□□□ -0.86
SLC38A9-226ENST00000524154 SLC19A1P41440 591 aa9.65□□□□□ -0.86
SLC38A9-226ENST00000524154 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
SLC38A9-226ENST00000524154 VASH1Q7L8A9 365 aaPredicted RBP9.65□□□□□ -0.86
SLC38A9-226ENST00000524154 ZNF775Q96BV0 537 aaPredicted RBP9.65□□□□□ -0.86
SLC38A9-226ENST00000524154 CDK15Q96Q40 435 aa9.65□□□□□ -0.86
SLC38A9-226ENST00000524154 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
SLC38A9-226ENST00000524154 GFRA3O60609 400 aa9.64□□□□□ -0.87
SLC38A9-226ENST00000524154 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
SLC38A9-226ENST00000524154 WNT7AO00755 349 aa9.63□□□□□ -0.87
SLC38A9-226ENST00000524154 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
SLC38A9-226ENST00000524154 TSGA10IPQ3SY00 556 aa9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 INTS6LQ5JSJ4 861 aaKnown RBP9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 SIRT1Q96EB6 747 aa9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L21D6R901 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 SIAH2O43255 324 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 ZNF787Q6DD87 383 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 LARP1Q6PKG0 1096 aaKnown RBP9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
SLC38A9-226ENST00000524154 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SLC38A9-226ENST00000524154 OXLD1Q5BKU9 147 aa9.6□□□□□ -0.87
SLC38A9-226ENST00000524154 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
SLC38A9-226ENST00000524154 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
SLC38A9-226ENST00000524154 RASA1P20936 1047 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 FSHRP23945 695 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 USP4Q13107 963 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 PTK7Q13308 1070 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 ARID5BQ14865 1188 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 CRTC2Q53ET0 693 aaPredicted RBP9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 V9GY48 417 aaPredicted RBP9.59□□□□□ -0.87
SLC38A9-226ENST00000524154 ADH1CP00326 375 aa9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 GRM5P41594 1212 aa9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 DHX9Q08211 1270 aaKnown RBP9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 OGFOD1Q8N543 542 aa9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 MRGPRX2Q96LB1 330 aa9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
SLC38A9-226ENST00000524154 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 ERVH48-1M5A8F1 160 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 RAB15P59190 212 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 CLDN10P78369 228 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 NR5A1Q13285 461 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 ZNF697Q5TEC3 545 aa9.57□□□□□ -0.88
SLC38A9-226ENST00000524154 LARGE2Q8N3Y3 721 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms