RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
VEGFA-225ENST00000523950 SOX12O15370 315 aa17.29■□□□□ 0.36
VEGFA-225ENST00000523950 PANK3Q9H999 370 aa17.29■□□□□ 0.36
VEGFA-225ENST00000523950 RGPD5Q99666 1765 aa17.29■□□□□ 0.36
VEGFA-225ENST00000523950 NSD2O96028 1365 aa17.28■□□□□ 0.36
VEGFA-225ENST00000523950 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
VEGFA-225ENST00000523950 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
VEGFA-225ENST00000523950 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
VEGFA-225ENST00000523950 SPATA31A1Q5TZJ5 1347 aa17.27■□□□□ 0.36
VEGFA-225ENST00000523950 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-225ENST00000523950 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
VEGFA-225ENST00000523950 CRB1P82279 1406 aa17.27■□□□□ 0.35
VEGFA-225ENST00000523950 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
VEGFA-225ENST00000523950 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
VEGFA-225ENST00000523950 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
VEGFA-225ENST00000523950 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
VEGFA-225ENST00000523950 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
VEGFA-225ENST00000523950 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
VEGFA-225ENST00000523950 WDR17Q8IZU2 1322 aa17.24■□□□□ 0.35
VEGFA-225ENST00000523950 LARP1Q6PKG0 1096 aaKnown RBP17.24■□□□□ 0.35
VEGFA-225ENST00000523950 AXIN2Q9Y2T1 843 aa17.24■□□□□ 0.35
VEGFA-225ENST00000523950 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
VEGFA-225ENST00000523950 IP6K1Q92551 441 aa17.23■□□□□ 0.35
VEGFA-225ENST00000523950 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
VEGFA-225ENST00000523950 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
VEGFA-225ENST00000523950 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
VEGFA-225ENST00000523950 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
VEGFA-225ENST00000523950 ERBB3P21860 1342 aa17.21■□□□□ 0.35
VEGFA-225ENST00000523950 FAM98CQ17RN3 349 aaKnown RBP17.21■□□□□ 0.35
VEGFA-225ENST00000523950 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
VEGFA-225ENST00000523950 TCP11L2Q8N4U5 519 aa17.21■□□□□ 0.35
VEGFA-225ENST00000523950 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
VEGFA-225ENST00000523950 AMPHP49418 695 aa17.2■□□□□ 0.34
VEGFA-225ENST00000523950 TOM1L2Q6ZVM7 507 aa17.2■□□□□ 0.34
VEGFA-225ENST00000523950 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
VEGFA-225ENST00000523950 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
VEGFA-225ENST00000523950 HOXC9P31274 260 aa17.19■□□□□ 0.34
VEGFA-225ENST00000523950 CARD10Q9BWT7 1032 aa17.19■□□□□ 0.34
VEGFA-225ENST00000523950 FLT4P35916 1363 aa17.18■□□□□ 0.34
VEGFA-225ENST00000523950 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
VEGFA-225ENST00000523950 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
VEGFA-225ENST00000523950 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
VEGFA-225ENST00000523950 A0A0G2JS52 829 aa17.17■□□□□ 0.34
VEGFA-225ENST00000523950 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-225ENST00000523950 MYT1Q01538 1121 aa17.17■□□□□ 0.34
VEGFA-225ENST00000523950 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
VEGFA-225ENST00000523950 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-225ENST00000523950 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-225ENST00000523950 PEAK1Q9H792 1746 aa17.17■□□□□ 0.34
VEGFA-225ENST00000523950 INSRP06213 1382 aa17.16■□□□□ 0.34
VEGFA-225ENST00000523950 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
VEGFA-225ENST00000523950 FBLN1P23142 703 aa17.15■□□□□ 0.34
VEGFA-225ENST00000523950 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
VEGFA-225ENST00000523950 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
VEGFA-225ENST00000523950 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
VEGFA-225ENST00000523950 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
VEGFA-225ENST00000523950 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
VEGFA-225ENST00000523950 POLKQ9UBT6 870 aa17.12■□□□□ 0.33
VEGFA-225ENST00000523950 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
VEGFA-225ENST00000523950 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.335e-12■□□□□ 9.5
VEGFA-225ENST00000523950 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
VEGFA-225ENST00000523950 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
VEGFA-225ENST00000523950 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
VEGFA-225ENST00000523950 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
VEGFA-225ENST00000523950 LTV1Q96GA3 475 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-225ENST00000523950 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
VEGFA-225ENST00000523950 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-225ENST00000523950 IL2RBP14784 551 aa17.08■□□□□ 0.32
VEGFA-225ENST00000523950 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
VEGFA-225ENST00000523950 DDB1Q16531 1140 aa17.08■□□□□ 0.32
VEGFA-225ENST00000523950 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
VEGFA-225ENST00000523950 CC2D1BQ5T0F9 858 aaKnown RBP17.06■□□□□ 0.32
VEGFA-225ENST00000523950 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
VEGFA-225ENST00000523950 OVOS2A0A0G2JMS6 1433 aa17.05■□□□□ 0.32
VEGFA-225ENST00000523950 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
VEGFA-225ENST00000523950 EXOC5O00471 708 aa17.05■□□□□ 0.32
VEGFA-225ENST00000523950 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
VEGFA-225ENST00000523950 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
VEGFA-225ENST00000523950 BCL9O00512 1426 aa17.04■□□□□ 0.32
VEGFA-225ENST00000523950 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.32
VEGFA-225ENST00000523950 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
VEGFA-225ENST00000523950 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
VEGFA-225ENST00000523950 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
VEGFA-225ENST00000523950 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
VEGFA-225ENST00000523950 MEGF6O75095 1541 aa17.01■□□□□ 0.31
VEGFA-225ENST00000523950 SBF2Q86WG5 1849 aa17■□□□□ 0.31
VEGFA-225ENST00000523950 SHANK3Q9BYB0 1731 aa17■□□□□ 0.31
VEGFA-225ENST00000523950 TATP17735 454 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-225ENST00000523950 MTHFSP49914 203 aa16.99■□□□□ 0.31
VEGFA-225ENST00000523950 FAM182BQ5T319 152 aa16.99■□□□□ 0.31
VEGFA-225ENST00000523950 PKD1L3Q7Z443 1732 aa16.99■□□□□ 0.31
VEGFA-225ENST00000523950 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
VEGFA-225ENST00000523950 EP400Q96L91 3159 aa16.98■□□□□ 0.31
VEGFA-225ENST00000523950 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
VEGFA-225ENST00000523950 EYA1Q99502 592 aa16.98■□□□□ 0.31
VEGFA-225ENST00000523950 USHBP1Q8N6Y0 703 aa16.97■□□□□ 0.31
VEGFA-225ENST00000523950 DDX10Q13206 875 aaKnown RBP16.96■□□□□ 0.31
VEGFA-225ENST00000523950 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
VEGFA-225ENST00000523950 NHSQ6T4R5 1651 aa16.95■□□□□ 0.3
VEGFA-225ENST00000523950 PARD3Q8TEW0 1356 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms