RNA–Protein interactions for RNA: ENST00000523916.5

CASP3-206, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-206ENST00000523916 SH3BP1Q9Y3L3 701 aa13.11□□□□□ -0.31
CASP3-206ENST00000523916 ESPNB1AK53 854 aa13.1□□□□□ -0.31
CASP3-206ENST00000523916 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
CASP3-206ENST00000523916 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
CASP3-206ENST00000523916 ANAPC15P60006 121 aa13.09□□□□□ -0.31
CASP3-206ENST00000523916 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
CASP3-206ENST00000523916 DHX57Q6P158 1386 aaKnown RBP13.09□□□□□ -0.31
CASP3-206ENST00000523916 DLC1Q96QB1 1528 aa13.09□□□□□ -0.31
CASP3-206ENST00000523916 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
CASP3-206ENST00000523916 ZNF526Q8TF50 670 aaPredicted RBP13.08□□□□□ -0.32
CASP3-206ENST00000523916 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
CASP3-206ENST00000523916 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
CASP3-206ENST00000523916 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
CASP3-206ENST00000523916 IRF6O14896 467 aa13.07□□□□□ -0.32
CASP3-206ENST00000523916 CGNQ9P2M7 1197 aaKnown RBP13.07□□□□□ -0.32
CASP3-206ENST00000523916 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
CASP3-206ENST00000523916 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
CASP3-206ENST00000523916 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
CASP3-206ENST00000523916 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
CASP3-206ENST00000523916 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
CASP3-206ENST00000523916 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
CASP3-206ENST00000523916 JCADQ9P266 1359 aa13.06□□□□□ -0.32
CASP3-206ENST00000523916 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
CASP3-206ENST00000523916 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
CASP3-206ENST00000523916 SEMA3FQ13275 785 aa13.05□□□□□ -0.32
CASP3-206ENST00000523916 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
CASP3-206ENST00000523916 STK26Q9P289 416 aa13.04□□□□□ -0.32
CASP3-206ENST00000523916 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
CASP3-206ENST00000523916 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
CASP3-206ENST00000523916 CDCA8Q53HL2 280 aa13.03□□□□□ -0.32
CASP3-206ENST00000523916 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
CASP3-206ENST00000523916 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
CASP3-206ENST00000523916 WAPLQ7Z5K2 1190 aa13.03□□□□□ -0.32
CASP3-206ENST00000523916 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
CASP3-206ENST00000523916 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.32
CASP3-206ENST00000523916 MAFGO15525 162 aa13.02□□□□□ -0.33
CASP3-206ENST00000523916 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
CASP3-206ENST00000523916 NBPF11Q86T75 865 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
CASP3-206ENST00000523916 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
CASP3-206ENST00000523916 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 MPNDQ8N594 471 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 BANK1Q8NDB2 785 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 POGKQ9P215 609 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 KIF1AQ12756 1690 aa13.01□□□□□ -0.33
CASP3-206ENST00000523916 EP400NLQ6ZTU2 488 aa13□□□□□ -0.33
CASP3-206ENST00000523916 ZBTB9Q96C00 473 aa12.99□□□□□ -0.33
CASP3-206ENST00000523916 TTC36A6NLP5 189 aa12.98□□□□□ -0.33
CASP3-206ENST00000523916 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
CASP3-206ENST00000523916 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
CASP3-206ENST00000523916 OFD1O75665 1012 aa12.98□□□□□ -0.33
CASP3-206ENST00000523916 LRRC59Q96AG4 307 aaKnown RBP12.98□□□□□ -0.33
CASP3-206ENST00000523916 PRAM1Q96QH2 718 aa12.98□□□□□ -0.33
CASP3-206ENST00000523916 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
CASP3-206ENST00000523916 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
CASP3-206ENST00000523916 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
CASP3-206ENST00000523916 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
CASP3-206ENST00000523916 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
CASP3-206ENST00000523916 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
CASP3-206ENST00000523916 LRP6O75581 1613 aa12.96□□□□□ -0.33
CASP3-206ENST00000523916 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
CASP3-206ENST00000523916 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
CASP3-206ENST00000523916 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
CASP3-206ENST00000523916 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.33
CASP3-206ENST00000523916 USP32Q8NFA0 1604 aa12.96□□□□□ -0.33
CASP3-206ENST00000523916 PANK2Q9BZ23 570 aa12.96□□□□□ -0.34
CASP3-206ENST00000523916 PXDNQ92626 1479 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 PNPLA6Q8IY17 1366 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 KCNJ4P48050 445 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
CASP3-206ENST00000523916 EIF3AQ14152 1382 aaKnown RBP12.95□□□□□ -0.34
CASP3-206ENST00000523916 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 DYNC1I1O14576 645 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 ZNF500O60304 480 aaPredicted RBP12.94□□□□□ -0.34
CASP3-206ENST00000523916 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 SIN3AQ96ST3 1273 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 PDE4AP27815 886 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 SATB1Q01826 763 aa12.94□□□□□ -0.34
CASP3-206ENST00000523916 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
CASP3-206ENST00000523916 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
CASP3-206ENST00000523916 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
CASP3-206ENST00000523916 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
CASP3-206ENST00000523916 MAP2K1Q02750 393 aaPredicted RBP12.92□□□□□ -0.34
CASP3-206ENST00000523916 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
CASP3-206ENST00000523916 GOLIM4O00461 696 aa12.92□□□□□ -0.34
CASP3-206ENST00000523916 TRIM6-TRIM34B2RNG4 842 aa12.91□□□□□ -0.34
CASP3-206ENST00000523916 NBPF9Q3BBW0 867 aa12.91□□□□□ -0.34
CASP3-206ENST00000523916 TRIM34Q9BYJ4 488 aa12.91□□□□□ -0.34
CASP3-206ENST00000523916 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
CASP3-206ENST00000523916 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
CASP3-206ENST00000523916 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
CASP3-206ENST00000523916 WASLO00401 505 aaPredicted RBP12.9□□□□□ -0.34
CASP3-206ENST00000523916 SOCS7O14512 581 aa12.9□□□□□ -0.34
CASP3-206ENST00000523916 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
CASP3-206ENST00000523916 RNF217Q8TC41 542 aa12.9□□□□□ -0.34
CASP3-206ENST00000523916 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
CASP3-206ENST00000523916 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms