RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
PVT1-213ENST00000522414 NUP155O75694 1391 aa12.23□□□□□ -0.45
PVT1-213ENST00000522414 PPP1R15AO75807 674 aaPredicted RBP12.23□□□□□ -0.45
PVT1-213ENST00000522414 DDX12PQ92771 950 aa12.23□□□□□ -0.45
PVT1-213ENST00000522414 E9PCH4 1651 aa12.22□□□□□ -0.45
PVT1-213ENST00000522414 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
PVT1-213ENST00000522414 ZFYVE9O95405 1425 aa12.22□□□□□ -0.45
PVT1-213ENST00000522414 HDGFP51858 240 aaKnown RBP12.22□□□□□ -0.45
PVT1-213ENST00000522414 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
PVT1-213ENST00000522414 TSKSQ9UJT2 592 aa12.21□□□□□ -0.45
PVT1-213ENST00000522414 MYO5BQ9ULV0 1848 aa12.21□□□□□ -0.46
PVT1-213ENST00000522414 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
PVT1-213ENST00000522414 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
PVT1-213ENST00000522414 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
PVT1-213ENST00000522414 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
PVT1-213ENST00000522414 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
PVT1-213ENST00000522414 SLAIN2Q9P270 581 aa12.18□□□□□ -0.46
PVT1-213ENST00000522414 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
PVT1-213ENST00000522414 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
PVT1-213ENST00000522414 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
PVT1-213ENST00000522414 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
PVT1-213ENST00000522414 FAM135BQ49AJ0 1406 aa12.16□□□□□ -0.46
PVT1-213ENST00000522414 DIP2AQ14689 1571 aa12.15□□□□□ -0.46
PVT1-213ENST00000522414 EN1Q05925 392 aaPredicted RBP12.15□□□□□ -0.46
PVT1-213ENST00000522414 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
PVT1-213ENST00000522414 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
PVT1-213ENST00000522414 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
PVT1-213ENST00000522414 ZNF326Q5BKZ1 582 aaKnown RBP12.14□□□□□ -0.47
PVT1-213ENST00000522414 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
PVT1-213ENST00000522414 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
PVT1-213ENST00000522414 SPHKAPQ2M3C7 1700 aa12.14□□□□□ -0.47
PVT1-213ENST00000522414 C3orf80F5H4A9 247 aa12.13□□□□□ -0.47
PVT1-213ENST00000522414 NBR1Q14596 966 aa12.13□□□□□ -0.47
PVT1-213ENST00000522414 MSH6P52701 1360 aa12.13□□□□□ -0.47
PVT1-213ENST00000522414 ADAMTS13Q76LX8 1427 aa12.12□□□□□ -0.47
PVT1-213ENST00000522414 SMAPO00193 183 aa12.12□□□□□ -0.47
PVT1-213ENST00000522414 GFRA3O60609 400 aa12.12□□□□□ -0.47
PVT1-213ENST00000522414 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
PVT1-213ENST00000522414 MAP3K7O43318 606 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 PPP4CP60510 307 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 LAPTM4AQ15012 233 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 NAIPQ13075 1403 aa12.11□□□□□ -0.47
PVT1-213ENST00000522414 PRIM1P49642 420 aaKnown RBP12.1□□□□□ -0.47
PVT1-213ENST00000522414 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
PVT1-213ENST00000522414 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
PVT1-213ENST00000522414 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
PVT1-213ENST00000522414 TRPM2O94759 1503 aa12.1□□□□□ -0.47
PVT1-213ENST00000522414 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 ATF3P18847 181 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 HFM1A2PYH4 1435 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 NCOA3Q9Y6Q9 1424 aa12.09□□□□□ -0.47
PVT1-213ENST00000522414 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
PVT1-213ENST00000522414 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
PVT1-213ENST00000522414 PDIA6Q15084 440 aa12.08□□□□□ -0.48
PVT1-213ENST00000522414 CDCA7LQ96GN5 454 aa12.08□□□□□ -0.48
PVT1-213ENST00000522414 PRKD2Q9BZL6 878 aa12.08□□□□□ -0.48
PVT1-213ENST00000522414 XRN1Q8IZH2 1706 aaKnown RBP12.07□□□□□ -0.48
PVT1-213ENST00000522414 MTRQ99707 1265 aa12.07□□□□□ -0.48
PVT1-213ENST00000522414 CLTCL1P53675 1640 aa12.07□□□□□ -0.48
PVT1-213ENST00000522414 METP08581 1390 aa12.06□□□□□ -0.48
PVT1-213ENST00000522414 PPP1R18Q6NYC8 613 aa12.05□□□□□ -0.48
PVT1-213ENST00000522414 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
PVT1-213ENST00000522414 PRSS12P56730 875 aa12.04□□□□□ -0.48
PVT1-213ENST00000522414 BRINP3Q76B58 766 aa12.04□□□□□ -0.48
PVT1-213ENST00000522414 ZNF516Q92618 1163 aa12.04□□□□□ -0.48
PVT1-213ENST00000522414 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
PVT1-213ENST00000522414 JCADQ9P266 1359 aa12.03□□□□□ -0.48
PVT1-213ENST00000522414 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
PVT1-213ENST00000522414 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.49
PVT1-213ENST00000522414 IL21Q9HBE4 155 aa12.02□□□□□ -0.49
PVT1-213ENST00000522414 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.01□□□□□ -0.49
PVT1-213ENST00000522414 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
PVT1-213ENST00000522414 TATDN2Q93075 761 aa12.01□□□□□ -0.49
PVT1-213ENST00000522414 KIF1BO60333 1816 aa12.01□□□□□ -0.49
PVT1-213ENST00000522414 DCCP43146 1447 aa12.01□□□□□ -0.49
PVT1-213ENST00000522414 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
PVT1-213ENST00000522414 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
PVT1-213ENST00000522414 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
PVT1-213ENST00000522414 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
PVT1-213ENST00000522414 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
PVT1-213ENST00000522414 PHLPP1O60346 1717 aa12□□□□□ -0.49
PVT1-213ENST00000522414 RGL3Q3MIN7 710 aa11.99□□□□□ -0.49
PVT1-213ENST00000522414 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
PVT1-213ENST00000522414 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
PVT1-213ENST00000522414 SPDYE16A6NNV3 312 aaPredicted RBP11.98□□□□□ -0.49
PVT1-213ENST00000522414 APLP1P51693 650 aa11.98□□□□□ -0.49
PVT1-213ENST00000522414 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
PVT1-213ENST00000522414 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
PVT1-213ENST00000522414 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
PVT1-213ENST00000522414 PPLO60437 1756 aa11.97□□□□□ -0.49
PVT1-213ENST00000522414 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
PVT1-213ENST00000522414 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.49
PVT1-213ENST00000522414 RPGRIP1LQ68CZ1 1315 aa11.96□□□□□ -0.49
PVT1-213ENST00000522414 ORAI2Q96SN7 254 aa11.96□□□□□ -0.49
PVT1-213ENST00000522414 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.49
PVT1-213ENST00000522414 MST1RQ04912 1400 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms