RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 USP17L2Q6R6M4 530 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
CNOT8-220ENST00000522139 ATG7O95352 703 aa9.26□□□□□ -0.93
CNOT8-220ENST00000522139 PDE4CQ08493 712 aa9.26□□□□□ -0.93
CNOT8-220ENST00000522139 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
CNOT8-220ENST00000522139 KANK4Q5T7N3 995 aaPredicted RBP9.26□□□□□ -0.93
CNOT8-220ENST00000522139 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
CNOT8-220ENST00000522139 ZBTB24O43167 697 aaPredicted RBP9.25□□□□□ -0.93
CNOT8-220ENST00000522139 TSGA10IPQ3SY00 556 aa9.25□□□□□ -0.93
CNOT8-220ENST00000522139 PLPP7Q8NBV4 271 aa9.25□□□□□ -0.93
CNOT8-220ENST00000522139 IRX2Q9BZI1 471 aaPredicted RBP9.25□□□□□ -0.93
CNOT8-220ENST00000522139 PODXL2Q9NZ53 605 aa9.25□□□□□ -0.93
CNOT8-220ENST00000522139 USTQ9Y2C2 406 aa9.25□□□□□ -0.93
CNOT8-220ENST00000522139 CARNS1A5YM72 827 aa9.24□□□□□ -0.93
CNOT8-220ENST00000522139 RPIAP49247 311 aa9.24□□□□□ -0.93
CNOT8-220ENST00000522139 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
CNOT8-220ENST00000522139 TRIM32Q13049 653 aa9.23□□□□□ -0.93
CNOT8-220ENST00000522139 NCOA4Q13772 614 aa9.23□□□□□ -0.93
CNOT8-220ENST00000522139 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
CNOT8-220ENST00000522139 AEBP1Q8IUX7 1158 aa9.23□□□□□ -0.93
CNOT8-220ENST00000522139 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
CNOT8-220ENST00000522139 C1QTNF2Q9BXJ5 285 aa9.23□□□□□ -0.93
CNOT8-220ENST00000522139 ZBTB7CA1YPR0 619 aa9.22□□□□□ -0.93
CNOT8-220ENST00000522139 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
CNOT8-220ENST00000522139 ELOAQ14241 798 aaKnown RBP9.22□□□□□ -0.93
CNOT8-220ENST00000522139 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
CNOT8-220ENST00000522139 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
CNOT8-220ENST00000522139 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
CNOT8-220ENST00000522139 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
CNOT8-220ENST00000522139 SKOR1P84550 965 aa9.21□□□□□ -0.94
CNOT8-220ENST00000522139 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.94
CNOT8-220ENST00000522139 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
CNOT8-220ENST00000522139 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
CNOT8-220ENST00000522139 MAP7D1Q3KQU3 841 aa9.2□□□□□ -0.94
CNOT8-220ENST00000522139 TRAF7Q6Q0C0 670 aa9.2□□□□□ -0.94
CNOT8-220ENST00000522139 TMEM88BA6NKF7 163 aa9.19□□□□□ -0.94
CNOT8-220ENST00000522139 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
CNOT8-220ENST00000522139 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
CNOT8-220ENST00000522139 TRMT44Q8IYL2 757 aaKnown RBP9.19□□□□□ -0.94
CNOT8-220ENST00000522139 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
CNOT8-220ENST00000522139 RASA1P20936 1047 aa9.18□□□□□ -0.94
CNOT8-220ENST00000522139 WNT7BP56706 349 aa9.18□□□□□ -0.94
CNOT8-220ENST00000522139 EML3Q32P44 896 aa9.18□□□□□ -0.94
CNOT8-220ENST00000522139 CRTC2Q53ET0 693 aaPredicted RBP9.18□□□□□ -0.94
CNOT8-220ENST00000522139 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
CNOT8-220ENST00000522139 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
CNOT8-220ENST00000522139 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
CNOT8-220ENST00000522139 NOVA2Q9UNW9 492 aaKnown RBP9.18□□□□□ -0.94
CNOT8-220ENST00000522139 ESPNB1AK53 854 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L15C9J2P7 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L13C9JLJ4 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L12C9JPN9 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L11C9JVI0 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L21D6R901 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L18D6R9N7 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L22D6RA61 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L17D6RBQ6 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L19D6RCP7 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L20D6RJB6 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 USP17L24Q0WX57 530 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 NBPF20Q3BBV1 942 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
CNOT8-220ENST00000522139 CDCA7Q9BWT1 371 aaPredicted RBP9.17□□□□□ -0.94
CNOT8-220ENST00000522139 FAM196BA6NMK8 535 aa9.16□□□□□ -0.94
CNOT8-220ENST00000522139 ATP5J2-PTCD1G3V325 749 aa9.16□□□□□ -0.94
CNOT8-220ENST00000522139 VARSP26640 1264 aaKnown RBP9.16□□□□□ -0.94
CNOT8-220ENST00000522139 RAB15P59190 212 aa9.16□□□□□ -0.94
CNOT8-220ENST00000522139 STK32AQ8WU08 396 aa9.16□□□□□ -0.94
CNOT8-220ENST00000522139 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
CNOT8-220ENST00000522139 PDZRN3Q9UPQ7 1066 aa9.16□□□□□ -0.94
CNOT8-220ENST00000522139 GFRA3O60609 400 aa9.15□□□□□ -0.94
CNOT8-220ENST00000522139 BRD1O95696 1058 aa9.15□□□□□ -0.94
CNOT8-220ENST00000522139 PTK7Q13308 1070 aa9.15□□□□□ -0.94
CNOT8-220ENST00000522139 OGFOD1Q8N543 542 aa9.15□□□□□ -0.94
CNOT8-220ENST00000522139 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
CNOT8-220ENST00000522139 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
CNOT8-220ENST00000522139 NRG2O14511 850 aaPredicted RBP9.14□□□□□ -0.95
CNOT8-220ENST00000522139 CLDN10P78369 228 aa9.14□□□□□ -0.95
CNOT8-220ENST00000522139 RC3H1Q5TC82 1133 aaKnown RBP9.14□□□□□ -0.95
CNOT8-220ENST00000522139 TMEM164Q5U3C3 297 aa9.14□□□□□ -0.95
CNOT8-220ENST00000522139 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
CNOT8-220ENST00000522139 CCDC125Q86Z20 511 aa9.14□□□□□ -0.95
CNOT8-220ENST00000522139 NOD1Q9Y239 953 aa9.14□□□□□ -0.95
CNOT8-220ENST00000522139 PRR20EP86478 221 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 PRR20CP86479 221 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 PRR20DP86480 221 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 PRR20BP86481 221 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 PRR20AP86496 221 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 ARID5BQ14865 1188 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 TRIM50Q86XT4 487 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 ANKMY2Q8IV38 441 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 EHBP1Q8NDI1 1231 aa9.13□□□□□ -0.95
CNOT8-220ENST00000522139 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
CNOT8-220ENST00000522139 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
CNOT8-220ENST00000522139 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
CNOT8-220ENST00000522139 TRIM67Q6ZTA4 783 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms