RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
CLK4-210ENST00000522136 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
CLK4-210ENST00000522136 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
CLK4-210ENST00000522136 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
CLK4-210ENST00000522136 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
CLK4-210ENST00000522136 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
CLK4-210ENST00000522136 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
CLK4-210ENST00000522136 IL13P35225 146 aa17.9■□□□□ 0.46
CLK4-210ENST00000522136 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
CLK4-210ENST00000522136 CPDO75976 1380 aa17.9■□□□□ 0.46
CLK4-210ENST00000522136 PRDM11Q9NQV5 511 aa17.9■□□□□ 0.46
CLK4-210ENST00000522136 COL18A1P39060 1754 aa17.89■□□□□ 0.46
CLK4-210ENST00000522136 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
CLK4-210ENST00000522136 KIF24Q5T7B8 1368 aa17.89■□□□□ 0.45
CLK4-210ENST00000522136 JCADQ9P266 1359 aa17.89■□□□□ 0.45
CLK4-210ENST00000522136 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
CLK4-210ENST00000522136 U2AF1L5P0DN76 240 aaPredicted RBP17.88■□□□□ 0.45
CLK4-210ENST00000522136 U2AF1Q01081 240 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLK4-210ENST00000522136 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
CLK4-210ENST00000522136 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
CLK4-210ENST00000522136 ADAMTS2O95450 1211 aa17.87■□□□□ 0.45
CLK4-210ENST00000522136 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
CLK4-210ENST00000522136 ANKRD24Q8TF21 1146 aa17.84■□□□□ 0.45
CLK4-210ENST00000522136 RGPD2P0DJD1 1756 aa17.84■□□□□ 0.45
CLK4-210ENST00000522136 HMOX1P09601 288 aa17.84■□□□□ 0.45
CLK4-210ENST00000522136 EYA1Q99502 592 aa17.84■□□□□ 0.45
CLK4-210ENST00000522136 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
CLK4-210ENST00000522136 CAMTA1Q9Y6Y1 1673 aa17.83■□□□□ 0.45
CLK4-210ENST00000522136 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
CLK4-210ENST00000522136 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.44
CLK4-210ENST00000522136 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
CLK4-210ENST00000522136 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
CLK4-210ENST00000522136 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
CLK4-210ENST00000522136 ERBB3P21860 1342 aa17.81■□□□□ 0.44
CLK4-210ENST00000522136 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 ABCC6O95255 1503 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 LRP6O75581 1613 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
CLK4-210ENST00000522136 COL14A1Q05707 1796 aaKnown RBP17.79■□□□□ 0.44
CLK4-210ENST00000522136 CSB-PGBD3P0DP91 1061 aa17.79■□□□□ 0.44
CLK4-210ENST00000522136 STRN4Q9NRL3 753 aa17.79■□□□□ 0.44
CLK4-210ENST00000522136 IGSF1Q8N6C5 1336 aa17.79■□□□□ 0.44
CLK4-210ENST00000522136 RSPH6AQ9H0K4 717 aa17.79■□□□□ 0.44
CLK4-210ENST00000522136 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
CLK4-210ENST00000522136 FCHSD2O94868 740 aa17.77■□□□□ 0.44
CLK4-210ENST00000522136 PRKAR2BP31323 418 aa17.77■□□□□ 0.44
CLK4-210ENST00000522136 HNRNPUQ00839 825 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLK4-210ENST00000522136 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
CLK4-210ENST00000522136 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
CLK4-210ENST00000522136 EVA1CP58658 441 aa17.77■□□□□ 0.43
CLK4-210ENST00000522136 PLCH1Q4KWH8 1693 aa17.76■□□□□ 0.43
CLK4-210ENST00000522136 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
CLK4-210ENST00000522136 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
CLK4-210ENST00000522136 LARP1Q6PKG0 1096 aaKnown RBP17.75■□□□□ 0.43
CLK4-210ENST00000522136 WDR17Q8IZU2 1322 aa17.75■□□□□ 0.43
CLK4-210ENST00000522136 APAF1O14727 1248 aa17.75■□□□□ 0.43
CLK4-210ENST00000522136 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
CLK4-210ENST00000522136 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
CLK4-210ENST00000522136 NGLY1Q96IV0 654 aa17.74■□□□□ 0.43
CLK4-210ENST00000522136 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
CLK4-210ENST00000522136 KDRP35968 1356 aa17.73■□□□□ 0.43
CLK4-210ENST00000522136 MEX3CQ5U5Q3 659 aaKnown RBP17.73■□□□□ 0.43
CLK4-210ENST00000522136 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
CLK4-210ENST00000522136 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
CLK4-210ENST00000522136 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
CLK4-210ENST00000522136 PNNQ9H307 717 aaKnown RBP17.71■□□□□ 0.43
CLK4-210ENST00000522136 SLIT2O94813 1529 aa17.71■□□□□ 0.43
CLK4-210ENST00000522136 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
CLK4-210ENST00000522136 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
CLK4-210ENST00000522136 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
CLK4-210ENST00000522136 NRAPQ86VF7 1730 aa17.7■□□□□ 0.42
CLK4-210ENST00000522136 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
CLK4-210ENST00000522136 NWD2Q9ULI1 1742 aa17.7■□□□□ 0.42
CLK4-210ENST00000522136 CARD10Q9BWT7 1032 aa17.69■□□□□ 0.42
CLK4-210ENST00000522136 NEFMP07197 916 aa17.68■□□□□ 0.42
CLK4-210ENST00000522136 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
CLK4-210ENST00000522136 CRB1P82279 1406 aa17.68■□□□□ 0.42
CLK4-210ENST00000522136 TMPOP42166 694 aaKnown RBP17.68■□□□□ 0.42
CLK4-210ENST00000522136 BCL9LQ86UU0 1499 aa17.67■□□□□ 0.42
CLK4-210ENST00000522136 UNC5CLQ8IV45 518 aa17.67■□□□□ 0.42
CLK4-210ENST00000522136 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
CLK4-210ENST00000522136 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
CLK4-210ENST00000522136 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
CLK4-210ENST00000522136 USP21Q9UK80 565 aa17.66■□□□□ 0.42
CLK4-210ENST00000522136 AFF2P51816 1311 aa17.65■□□□□ 0.42
CLK4-210ENST00000522136 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
CLK4-210ENST00000522136 CCDC9Q9Y3X0 531 aaKnown RBP17.65■□□□□ 0.42
CLK4-210ENST00000522136 MEGF6O75095 1541 aa17.65■□□□□ 0.42
CLK4-210ENST00000522136 DLG5Q8TDM6 1919 aa17.65■□□□□ 0.42
CLK4-210ENST00000522136 RIPK4P57078 832 aa17.64■□□□□ 0.41
CLK4-210ENST00000522136 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
CLK4-210ENST00000522136 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
CLK4-210ENST00000522136 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
CLK4-210ENST00000522136 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
CLK4-210ENST00000522136 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
CLK4-210ENST00000522136 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms