RNA–Protein interactions for RNA: ENST00000521940.1

EFR3A-205, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 804 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-205ENST00000521940 TMEM259Q4ZIN3 620 aa10.59□□□□□ -0.71
EFR3A-205ENST00000521940 CCDC116Q8IYX3 515 aa10.59□□□□□ -0.71
EFR3A-205ENST00000521940 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
EFR3A-205ENST00000521940 RFC5P40937 340 aa10.58□□□□□ -0.72
EFR3A-205ENST00000521940 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
EFR3A-205ENST00000521940 FBXO31Q5XUX0 539 aaPredicted RBP10.57□□□□□ -0.72
EFR3A-205ENST00000521940 BMP2P12643 396 aa10.56□□□□□ -0.72
EFR3A-205ENST00000521940 DHX9Q08211 1270 aaKnown RBP10.56□□□□□ -0.72
EFR3A-205ENST00000521940 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
EFR3A-205ENST00000521940 WIPF1O43516 503 aa10.55□□□□□ -0.72
EFR3A-205ENST00000521940 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
EFR3A-205ENST00000521940 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
EFR3A-205ENST00000521940 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
EFR3A-205ENST00000521940 KCTD15Q96SI1 283 aaPredicted RBP10.55□□□□□ -0.72
EFR3A-205ENST00000521940 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
EFR3A-205ENST00000521940 MAN1A2O60476 641 aa10.54□□□□□ -0.72
EFR3A-205ENST00000521940 IRF7Q92985 503 aa10.54□□□□□ -0.72
EFR3A-205ENST00000521940 LINC00528Q8N1L1 170 aa10.53□□□□□ -0.72
EFR3A-205ENST00000521940 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
EFR3A-205ENST00000521940 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
EFR3A-205ENST00000521940 ADAM32Q8TC27 787 aa10.52□□□□□ -0.73
EFR3A-205ENST00000521940 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
EFR3A-205ENST00000521940 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
EFR3A-205ENST00000521940 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
EFR3A-205ENST00000521940 EPS8L1Q8TE68 723 aa10.5□□□□□ -0.73
EFR3A-205ENST00000521940 H3BM21 787 aa10.49□□□□□ -0.73
EFR3A-205ENST00000521940 BRPF1P55201 1214 aaPredicted RBP10.49□□□□□ -0.73
EFR3A-205ENST00000521940 STK17AQ9UEE5 414 aa10.47□□□□□ -0.73
EFR3A-205ENST00000521940 SOBPA7XYQ1 873 aa10.46□□□□□ -0.73
EFR3A-205ENST00000521940 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
EFR3A-205ENST00000521940 INTS6LQ5JSJ4 861 aaKnown RBP10.46□□□□□ -0.73
EFR3A-205ENST00000521940 Q6ZVU0 165 aa10.46□□□□□ -0.73
EFR3A-205ENST00000521940 OCSTAMPQ9BR26 566 aa10.46□□□□□ -0.73
EFR3A-205ENST00000521940 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
EFR3A-205ENST00000521940 VEGFBP49765 207 aa10.45□□□□□ -0.74
EFR3A-205ENST00000521940 TTLL8A6PVC2 850 aa10.44□□□□□ -0.74
EFR3A-205ENST00000521940 APBB1O00213 710 aa10.44□□□□□ -0.74
EFR3A-205ENST00000521940 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.44□□□□□ -0.74
EFR3A-205ENST00000521940 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
EFR3A-205ENST00000521940 CBLBQ13191 982 aa10.43□□□□□ -0.74
EFR3A-205ENST00000521940 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
EFR3A-205ENST00000521940 ZNF592Q92610 1267 aa10.43□□□□□ -0.74
EFR3A-205ENST00000521940 FAM181BA6NEQ2 426 aa10.42□□□□□ -0.74
EFR3A-205ENST00000521940 ZBBXA8MT70 800 aa10.42□□□□□ -0.74
EFR3A-205ENST00000521940 GMPRP36959 345 aa10.42□□□□□ -0.74
EFR3A-205ENST00000521940 RAB15P59190 212 aa10.42□□□□□ -0.74
EFR3A-205ENST00000521940 SPINT1O43278 529 aa10.41□□□□□ -0.74
EFR3A-205ENST00000521940 LCE2CQ5TA81 110 aa10.41□□□□□ -0.74
EFR3A-205ENST00000521940 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
EFR3A-205ENST00000521940 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
EFR3A-205ENST00000521940 DNMT3LQ9UJW3 386 aa10.4□□□□□ -0.74
EFR3A-205ENST00000521940 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
EFR3A-205ENST00000521940 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
EFR3A-205ENST00000521940 RELBQ01201 579 aa10.39□□□□□ -0.75
EFR3A-205ENST00000521940 PCDHB9Q9Y5E1 797 aa10.39□□□□□ -0.75
EFR3A-205ENST00000521940 ESPNB1AK53 854 aa10.38□□□□□ -0.75
EFR3A-205ENST00000521940 ERVH48-1M5A8F1 160 aa10.38□□□□□ -0.75
EFR3A-205ENST00000521940 SOCS7O14512 581 aa10.38□□□□□ -0.75
EFR3A-205ENST00000521940 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
EFR3A-205ENST00000521940 FIGNL2A6NMB9 653 aa10.37□□□□□ -0.75
EFR3A-205ENST00000521940 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
EFR3A-205ENST00000521940 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
EFR3A-205ENST00000521940 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
EFR3A-205ENST00000521940 GJD4Q96KN9 370 aaPredicted RBP10.37□□□□□ -0.75
EFR3A-205ENST00000521940 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
EFR3A-205ENST00000521940 RNF20Q5VTR2 975 aa10.36□□□□□ -0.75
EFR3A-205ENST00000521940 TMPRSS4Q9NRS4 437 aa10.36□□□□□ -0.75
EFR3A-205ENST00000521940 ADH1AP07327 375 aa10.35□□□□□ -0.75
EFR3A-205ENST00000521940 FBXO45P0C2W1 286 aa10.35□□□□□ -0.75
EFR3A-205ENST00000521940 ZSCAN1Q8NBB4 408 aa10.35□□□□□ -0.75
EFR3A-205ENST00000521940 POLMQ9NP87 494 aaPredicted RBP10.35□□□□□ -0.75
EFR3A-205ENST00000521940 NDUFB9Q9Y6M9 179 aa10.35□□□□□ -0.75
EFR3A-205ENST00000521940 PTSQ03393 145 aa10.34□□□□□ -0.75
EFR3A-205ENST00000521940 NR1H3Q13133 447 aa10.34□□□□□ -0.75
EFR3A-205ENST00000521940 PRM3Q9NNZ6 103 aa10.34□□□□□ -0.75
EFR3A-205ENST00000521940 INSM2Q96T92 566 aaPredicted RBP10.33□□□□□ -0.76
EFR3A-205ENST00000521940 LILRA1O75019 489 aa10.32□□□□□ -0.76
EFR3A-205ENST00000521940 PTGIRP43119 386 aa10.32□□□□□ -0.76
EFR3A-205ENST00000521940 ZNF395Q9H8N7 513 aaPredicted RBP10.32□□□□□ -0.76
EFR3A-205ENST00000521940 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
EFR3A-205ENST00000521940 CTSOP43234 321 aaPredicted RBP10.31□□□□□ -0.76
EFR3A-205ENST00000521940 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
EFR3A-205ENST00000521940 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
EFR3A-205ENST00000521940 ADD1P35611 737 aaKnown RBP10.3□□□□□ -0.76
EFR3A-205ENST00000521940 CCDC155Q8N6L0 562 aa10.29□□□□□ -0.76
EFR3A-205ENST00000521940 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
EFR3A-205ENST00000521940 ATP5J2-PTCD1G3V325 749 aa10.27□□□□□ -0.77
EFR3A-205ENST00000521940 RNF217Q8TC41 542 aa10.27□□□□□ -0.77
EFR3A-205ENST00000521940 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
EFR3A-205ENST00000521940 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
EFR3A-205ENST00000521940 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
EFR3A-205ENST00000521940 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
EFR3A-205ENST00000521940 NANOS1Q8WY41 292 aaKnown RBP10.25□□□□□ -0.77
EFR3A-205ENST00000521940 ITGA6P23229 1130 aa10.24□□□□□ -0.77
EFR3A-205ENST00000521940 RNF144AP50876 292 aaPredicted RBP10.23□□□□□ -0.77
EFR3A-205ENST00000521940 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
EFR3A-205ENST00000521940 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
EFR3A-205ENST00000521940 KDF1Q8NAX2 398 aaPredicted RBP10.23□□□□□ -0.77
EFR3A-205ENST00000521940 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
EFR3A-205ENST00000521940 PCDHB11Q9Y5F2 797 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms