RNA–Protein interactions for RNA: ENST00000521940.1

EFR3A-205, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 804 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-205ENST00000521940 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
EFR3A-205ENST00000521940 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
EFR3A-205ENST00000521940 SENP3Q9H4L4 574 aaPredicted RBP25.42■■□□□ 1.66
EFR3A-205ENST00000521940 PHF23Q9BUL5 403 aaPredicted RBP25.08■■□□□ 1.61
EFR3A-205ENST00000521940 FOXD1Q16676 465 aa23.55■■□□□ 1.36
EFR3A-205ENST00000521940 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
EFR3A-205ENST00000521940 ADRA2BP18089 450 aa22.19■■□□□ 1.14
EFR3A-205ENST00000521940 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
EFR3A-205ENST00000521940 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
EFR3A-205ENST00000521940 MSH5O43196 834 aa22.05■■□□□ 1.12
EFR3A-205ENST00000521940 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
EFR3A-205ENST00000521940 SCAF1Q9H7N4 1312 aaKnown RBP20.51■□□□□ 0.87
EFR3A-205ENST00000521940 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
EFR3A-205ENST00000521940 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
EFR3A-205ENST00000521940 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
EFR3A-205ENST00000521940 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
EFR3A-205ENST00000521940 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
EFR3A-205ENST00000521940 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
EFR3A-205ENST00000521940 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
EFR3A-205ENST00000521940 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
EFR3A-205ENST00000521940 NPM3O75607 178 aaKnown RBP19.17■□□□□ 0.66
EFR3A-205ENST00000521940 KCNA4P22459 653 aa19.05■□□□□ 0.64
EFR3A-205ENST00000521940 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
EFR3A-205ENST00000521940 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
EFR3A-205ENST00000521940 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
EFR3A-205ENST00000521940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
EFR3A-205ENST00000521940 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
EFR3A-205ENST00000521940 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
EFR3A-205ENST00000521940 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
EFR3A-205ENST00000521940 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
EFR3A-205ENST00000521940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
EFR3A-205ENST00000521940 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
EFR3A-205ENST00000521940 APLP2Q06481 763 aa17.97■□□□□ 0.47
EFR3A-205ENST00000521940 CAPN15O75808 1086 aa17.91■□□□□ 0.46
EFR3A-205ENST00000521940 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
EFR3A-205ENST00000521940 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
EFR3A-205ENST00000521940 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
EFR3A-205ENST00000521940 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
EFR3A-205ENST00000521940 ZNF219Q9P2Y4 722 aaPredicted RBP17.71■□□□□ 0.43
EFR3A-205ENST00000521940 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
EFR3A-205ENST00000521940 DSG3P32926 999 aa17.66■□□□□ 0.42
EFR3A-205ENST00000521940 ABCB7O75027 752 aa17.45■□□□□ 0.38
EFR3A-205ENST00000521940 ZBTB22O15209 634 aa17.44■□□□□ 0.38
EFR3A-205ENST00000521940 POLA2Q14181 598 aa17.26■□□□□ 0.35
EFR3A-205ENST00000521940 ATXN8OSP0DMR3 200 aa17.23■□□□□ 0.35
EFR3A-205ENST00000521940 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
EFR3A-205ENST00000521940 ZBTB12Q9Y330 459 aaPredicted RBP17.05■□□□□ 0.32
EFR3A-205ENST00000521940 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
EFR3A-205ENST00000521940 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
EFR3A-205ENST00000521940 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
EFR3A-205ENST00000521940 FBLN2P98095 1184 aa16.75■□□□□ 0.27
EFR3A-205ENST00000521940 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
EFR3A-205ENST00000521940 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
EFR3A-205ENST00000521940 SPDYE2BA6NHP3 402 aa16.49■□□□□ 0.23
EFR3A-205ENST00000521940 SPDYE6P0CI01 402 aa16.49■□□□□ 0.23
EFR3A-205ENST00000521940 SPDYE2Q495Y8 402 aa16.49■□□□□ 0.23
EFR3A-205ENST00000521940 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
EFR3A-205ENST00000521940 POTEHQ6S545 545 aa16.47■□□□□ 0.23
EFR3A-205ENST00000521940 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
EFR3A-205ENST00000521940 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
EFR3A-205ENST00000521940 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
EFR3A-205ENST00000521940 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
EFR3A-205ENST00000521940 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
EFR3A-205ENST00000521940 SPDYE1Q8NFV5 336 aaPredicted RBP16.15■□□□□ 0.18
EFR3A-205ENST00000521940 PABPN1Q86U42 306 aaKnown RBP eCLIP16.07■□□□□ 0.16
EFR3A-205ENST00000521940 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
EFR3A-205ENST00000521940 PIP4P2Q8N4L2 257 aa16.04■□□□□ 0.16
EFR3A-205ENST00000521940 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
EFR3A-205ENST00000521940 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
EFR3A-205ENST00000521940 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
EFR3A-205ENST00000521940 PRKAR2AP13861 404 aaKnown RBP15.82■□□□□ 0.12
EFR3A-205ENST00000521940 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
EFR3A-205ENST00000521940 HAX1O00165 279 aa15.75■□□□□ 0.11
EFR3A-205ENST00000521940 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
EFR3A-205ENST00000521940 SP7Q8TDD2 431 aaPredicted RBP15.6■□□□□ 0.09
EFR3A-205ENST00000521940 PROM2Q8N271 834 aa15.54■□□□□ 0.08
EFR3A-205ENST00000521940 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
EFR3A-205ENST00000521940 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
EFR3A-205ENST00000521940 FKBP8Q14318 412 aa15.45■□□□□ 0.06
EFR3A-205ENST00000521940 CREBZFQ9NS37 354 aa15.45■□□□□ 0.06
EFR3A-205ENST00000521940 EVX2Q03828 476 aa15.41■□□□□ 0.06
EFR3A-205ENST00000521940 CD44P16070 742 aaKnown RBP15.35■□□□□ 0.05
EFR3A-205ENST00000521940 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
EFR3A-205ENST00000521940 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
EFR3A-205ENST00000521940 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
EFR3A-205ENST00000521940 MIER1Q8N108 512 aa15.23■□□□□ 0.03
EFR3A-205ENST00000521940 CLCN6P51797 869 aa15.2■□□□□ 0.02
EFR3A-205ENST00000521940 GABBR2O75899 941 aa15.18■□□□□ 0.02
EFR3A-205ENST00000521940 MNX1P50219 401 aaPredicted RBP15.18■□□□□ 0.02
EFR3A-205ENST00000521940 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
EFR3A-205ENST00000521940 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
EFR3A-205ENST00000521940 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
EFR3A-205ENST00000521940 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
EFR3A-205ENST00000521940 ZBTB47Q9UFB7 747 aaPredicted RBP15.09■□□□□ 0.01
EFR3A-205ENST00000521940 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
EFR3A-205ENST00000521940 PHF12Q96QT6 1004 aa14.94□□□□□ -0.02
EFR3A-205ENST00000521940 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
EFR3A-205ENST00000521940 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
EFR3A-205ENST00000521940 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
EFR3A-205ENST00000521940 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms